RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 PPM1LQ5SGD2 360 aa21.02■□□□□ 0.96
CAPN1-211ENST00000527739 ANKS3Q6ZW76 656 aa21.02■□□□□ 0.96
CAPN1-211ENST00000527739 SV2BQ7L1I2 683 aa21.02■□□□□ 0.96
CAPN1-211ENST00000527739 UBALD2Q8IYN6 164 aa21.02■□□□□ 0.96
CAPN1-211ENST00000527739 ZNF707Q96C28 371 aaPredicted RBP21.02■□□□□ 0.96
CAPN1-211ENST00000527739 KIF12Q96FN5 646 aa21.02■□□□□ 0.96
CAPN1-211ENST00000527739 HAPLN2Q9GZV7 340 aa21.02■□□□□ 0.96
CAPN1-211ENST00000527739 CDY1Q9Y6F8 540 aa21.02■□□□□ 0.96
CAPN1-211ENST00000527739 CLUHO75153 1309 aa21.02■□□□□ 0.95
CAPN1-211ENST00000527739 MEFVO15553 781 aaPredicted RBP21.01■□□□□ 0.95
CAPN1-211ENST00000527739 C8AP07357 584 aa21.01■□□□□ 0.95
CAPN1-211ENST00000527739 MCM4P33991 863 aa21.01■□□□□ 0.95
CAPN1-211ENST00000527739 TNFSF9P41273 254 aa21.01■□□□□ 0.95
CAPN1-211ENST00000527739 ARPP19P56211 112 aa21.01■□□□□ 0.95
CAPN1-211ENST00000527739 ZC2HC1CQ53FD0 456 aaPredicted RBP21.01■□□□□ 0.95
CAPN1-211ENST00000527739 PRRX2Q99811 253 aa21.01■□□□□ 0.95
CAPN1-211ENST00000527739 MSTO1Q9BUK6 570 aa21.01■□□□□ 0.95
CAPN1-211ENST00000527739 TFIP11Q9UBB9 837 aaKnown RBP21.01■□□□□ 0.95
CAPN1-211ENST00000527739 MTRRQ9UBK8 725 aa21.01■□□□□ 0.95
CAPN1-211ENST00000527739 STK17AQ9UEE5 414 aa21.01■□□□□ 0.95
CAPN1-211ENST00000527739 FBXW11Q9UKB1 542 aa21.01■□□□□ 0.95
CAPN1-211ENST00000527739 SCP2P22307 547 aa21■□□□□ 0.95
CAPN1-211ENST00000527739 PPP2R3AQ06190 1150 aa21■□□□□ 0.95
CAPN1-211ENST00000527739 KYAT1Q16773 422 aa21■□□□□ 0.95
CAPN1-211ENST00000527739 SPRYD3Q8NCJ5 442 aa21■□□□□ 0.95
CAPN1-211ENST00000527739 DDX12PQ92771 950 aa21■□□□□ 0.95
CAPN1-211ENST00000527739 SNX21Q969T3 373 aa21■□□□□ 0.95
CAPN1-211ENST00000527739 ZNF396Q96N95 335 aaPredicted RBP21■□□□□ 0.95
CAPN1-211ENST00000527739 RPF1Q9H9Y2 349 aaKnown RBP21■□□□□ 0.95
CAPN1-211ENST00000527739 PLEKHA5Q9HAU0 1116 aa21■□□□□ 0.95
CAPN1-211ENST00000527739 TUBGCP4Q9UGJ1 667 aa21■□□□□ 0.95
CAPN1-211ENST00000527739 GTF3C3Q9Y5Q9 886 aa21■□□□□ 0.95
CAPN1-211ENST00000527739 MYO15AQ9UKN7 3530 aa20.99■□□□□ 0.95
CAPN1-211ENST00000527739 LACTBL1A8MY62 500 aa20.99■□□□□ 0.95
CAPN1-211ENST00000527739 OGTO15294 1046 aa20.99■□□□□ 0.95
CAPN1-211ENST00000527739 CCL16O15467 120 aa20.99■□□□□ 0.95
CAPN1-211ENST00000527739 ABCD1P33897 745 aa20.99■□□□□ 0.95
CAPN1-211ENST00000527739 STAT6P42226 847 aa20.99■□□□□ 0.95
CAPN1-211ENST00000527739 RAB33AQ14088 237 aa20.99■□□□□ 0.95
CAPN1-211ENST00000527739 FOXD4L6Q3SYB3 417 aaPredicted RBP20.99■□□□□ 0.95
CAPN1-211ENST00000527739 VARS2Q5ST30 1063 aaKnown RBP20.99■□□□□ 0.95
CAPN1-211ENST00000527739 ZBTB41Q5SVQ8 909 aa20.99■□□□□ 0.95
CAPN1-211ENST00000527739 AXDND1Q5T1B0 1012 aaPredicted RBP20.99■□□□□ 0.95
CAPN1-211ENST00000527739 RSPO2Q6UXX9 243 aaPredicted RBP20.99■□□□□ 0.95
CAPN1-211ENST00000527739 FOXD4L3Q6VB84 417 aaPredicted RBP20.99■□□□□ 0.95
CAPN1-211ENST00000527739 CCDC73Q6ZRK6 1079 aa20.99■□□□□ 0.95
CAPN1-211ENST00000527739 GET4Q7L5D6 327 aaPredicted RBP20.99■□□□□ 0.95
CAPN1-211ENST00000527739 GRASPQ7Z6J2 395 aaPredicted RBP20.99■□□□□ 0.95
CAPN1-211ENST00000527739 SFR1Q86XK3 245 aa20.99■□□□□ 0.95
CAPN1-211ENST00000527739 SLC7A14Q8TBB6 771 aa20.99■□□□□ 0.95
CAPN1-211ENST00000527739 RHOBTB2Q9BYZ6 727 aa20.99■□□□□ 0.95
CAPN1-211ENST00000527739 KCNK12Q9HB15 430 aa20.99■□□□□ 0.95
CAPN1-211ENST00000527739 TBC1D7Q9P0N9 293 aa20.99■□□□□ 0.95
CAPN1-211ENST00000527739 BACE2Q9Y5Z0 518 aa20.99■□□□□ 0.95
CAPN1-211ENST00000527739 MYMKA6NI61 221 aa20.98■□□□□ 0.95
CAPN1-211ENST00000527739 H0Y858 1186 aa20.98■□□□□ 0.95
CAPN1-211ENST00000527739 H7C4K7 107 aa20.98■□□□□ 0.95
CAPN1-211ENST00000527739 N4BP1O75113 896 aaKnown RBP20.98■□□□□ 0.95
CAPN1-211ENST00000527739 XYLBO75191 536 aa20.98■□□□□ 0.95
CAPN1-211ENST00000527739 PIGRP01833 764 aa20.98■□□□□ 0.95
CAPN1-211ENST00000527739 IDEP14735 1019 aa20.98■□□□□ 0.95
CAPN1-211ENST00000527739 ELF1P32519 619 aa20.98■□□□□ 0.95
CAPN1-211ENST00000527739 GTF2BQ00403 316 aa20.98■□□□□ 0.95
CAPN1-211ENST00000527739 TMEM130Q8N3G9 435 aa20.98■□□□□ 0.95
CAPN1-211ENST00000527739 PDILTQ8N807 584 aa20.98■□□□□ 0.95
CAPN1-211ENST00000527739 MYADMQ96S97 322 aa20.98■□□□□ 0.95
CAPN1-211ENST00000527739 MRPL44Q9H9J2 332 aaKnown RBP20.98■□□□□ 0.95
CAPN1-211ENST00000527739 MYO10Q9HD67 2058 aa20.97■□□□□ 0.95
CAPN1-211ENST00000527739 A0A0B4J269 797 aa20.97■□□□□ 0.95
CAPN1-211ENST00000527739 TTC26A0AVF1 554 aa20.97■□□□□ 0.95
CAPN1-211ENST00000527739 ANKRD63C9JTQ0 380 aa20.97■□□□□ 0.95
CAPN1-211ENST00000527739 HNRNPA1P09651 372 aaKnown RBP eCLIP20.97■□□□□ 0.95
CAPN1-211ENST00000527739 FSHRP23945 695 aa20.97■□□□□ 0.95
CAPN1-211ENST00000527739 NTHL1P78549 312 aa20.97■□□□□ 0.95
CAPN1-211ENST00000527739 TDGQ13569 410 aa20.97■□□□□ 0.95
CAPN1-211ENST00000527739 ADALQ6DHV7 355 aa20.97■□□□□ 0.95
CAPN1-211ENST00000527739 MAP4K3Q8IVH8 894 aa20.97■□□□□ 0.95
CAPN1-211ENST00000527739 RSAD2Q8WXG1 361 aa20.97■□□□□ 0.95
CAPN1-211ENST00000527739 ATOH1Q92858 354 aaPredicted RBP20.97■□□□□ 0.95
CAPN1-211ENST00000527739 FIZ1Q96SL8 496 aa20.97■□□□□ 0.95
CAPN1-211ENST00000527739 MFSD1Q9H3U5 465 aa20.97■□□□□ 0.95
CAPN1-211ENST00000527739 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.97■□□□□ 0.95
CAPN1-211ENST00000527739 UBQLN1Q9UMX0 589 aaKnown RBP20.97■□□□□ 0.95
CAPN1-211ENST00000527739 SYN3O14994 580 aa20.96■□□□□ 0.95
CAPN1-211ENST00000527739 SPTLC2O15270 562 aa20.96■□□□□ 0.95
CAPN1-211ENST00000527739 XPOTO43592 962 aaKnown RBP20.96■□□□□ 0.95
CAPN1-211ENST00000527739 NASPP49321 788 aaPredicted RBP20.96■□□□□ 0.95
CAPN1-211ENST00000527739 GUCY2FP51841 1108 aa20.96■□□□□ 0.95
CAPN1-211ENST00000527739 ENOX2Q16206 610 aaKnown RBP20.96■□□□□ 0.95
CAPN1-211ENST00000527739 UVSSAQ2YD98 709 aa20.96■□□□□ 0.95
CAPN1-211ENST00000527739 CTXN3Q4LDR2 81 aa20.96■□□□□ 0.95
CAPN1-211ENST00000527739 SLC39A4Q6P5W5 647 aa20.96■□□□□ 0.95
CAPN1-211ENST00000527739 ZNF720Q7Z2F6 126 aa20.96■□□□□ 0.95
CAPN1-211ENST00000527739 TMEM105Q8N8V8 129 aa20.96■□□□□ 0.95
CAPN1-211ENST00000527739 LINC00301Q8NCQ3 95 aa20.96■□□□□ 0.95
CAPN1-211ENST00000527739 APPL2Q8NEU8 664 aa20.96■□□□□ 0.95
CAPN1-211ENST00000527739 ST13P5Q8NFI4 369 aaPredicted RBP20.96■□□□□ 0.95
CAPN1-211ENST00000527739 KCNN1Q92952 543 aa20.96■□□□□ 0.95
CAPN1-211ENST00000527739 SUSD3Q96L08 255 aa20.96■□□□□ 0.95
CAPN1-211ENST00000527739 IGSF9Q9P2J2 1179 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms