RNA–Protein interactions for RNA: ENST00000527691.5

GPATCH4-213, Transcript of G-patch domain containing 4, humanhuman

TSL 4

Gene GPATCH4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-213ENST00000527691 GTF2F1P35269 517 aaKnown RBP eCLIP12.9□□□□□ -0.34
GPATCH4-213ENST00000527691 NOP14P78316 857 aaKnown RBP12.9□□□□□ -0.34
GPATCH4-213ENST00000527691 TFAMQ00059 246 aaKnown RBP12.9□□□□□ -0.34
GPATCH4-213ENST00000527691 TMEM62Q0P6H9 643 aa12.9□□□□□ -0.34
GPATCH4-213ENST00000527691 TRPC3Q13507 836 aa12.9□□□□□ -0.34
GPATCH4-213ENST00000527691 GDF6Q6KF10 455 aaPredicted RBP12.9□□□□□ -0.34
GPATCH4-213ENST00000527691 SLC35F6Q8N357 371 aa12.9□□□□□ -0.34
GPATCH4-213ENST00000527691 UBR7Q8N806 425 aa12.9□□□□□ -0.34
GPATCH4-213ENST00000527691 LNX1Q8TBB1 728 aaPredicted RBP12.9□□□□□ -0.34
GPATCH4-213ENST00000527691 CALR3Q96L12 384 aaKnown RBP12.9□□□□□ -0.34
GPATCH4-213ENST00000527691 NAPGQ99747 312 aaPredicted RBP12.9□□□□□ -0.34
GPATCH4-213ENST00000527691 SEZ6LQ9BYH1 1024 aa12.9□□□□□ -0.34
GPATCH4-213ENST00000527691 IRX2Q9BZI1 471 aaPredicted RBP12.9□□□□□ -0.34
GPATCH4-213ENST00000527691 MTMR12Q9C0I1 747 aa12.9□□□□□ -0.34
GPATCH4-213ENST00000527691 HMX1Q9NP08 348 aaPredicted RBP12.9□□□□□ -0.34
GPATCH4-213ENST00000527691 NOCTQ9UK39 431 aaKnown RBP12.9□□□□□ -0.34
GPATCH4-213ENST00000527691 RIOK3O14730 519 aaKnown RBP12.89□□□□□ -0.35
GPATCH4-213ENST00000527691 CAND2O75155 1236 aa12.89□□□□□ -0.35
GPATCH4-213ENST00000527691 TACC1O75410 805 aa12.89□□□□□ -0.35
GPATCH4-213ENST00000527691 INHAP05111 366 aa12.89□□□□□ -0.35
GPATCH4-213ENST00000527691 H2AFZP0C0S5 128 aa12.89□□□□□ -0.35
GPATCH4-213ENST00000527691 ACO1P21399 889 aaKnown RBP12.89□□□□□ -0.35
GPATCH4-213ENST00000527691 GRK4P32298 578 aa12.89□□□□□ -0.35
GPATCH4-213ENST00000527691 OSTNP61366 133 aa12.89□□□□□ -0.35
GPATCH4-213ENST00000527691 YWHAEP62258 255 aaKnown RBP12.89□□□□□ -0.35
GPATCH4-213ENST00000527691 IFI16Q16666 785 aaKnown RBP12.89□□□□□ -0.35
GPATCH4-213ENST00000527691 H2AFVQ71UI9 128 aa12.89□□□□□ -0.35
GPATCH4-213ENST00000527691 TMEM192Q8IY95 271 aa12.89□□□□□ -0.35
GPATCH4-213ENST00000527691 EPS8L1Q8TE68 723 aa12.89□□□□□ -0.35
GPATCH4-213ENST00000527691 FAM212AQ96EL1 285 aa12.89□□□□□ -0.35
GPATCH4-213ENST00000527691 PI4K2AQ9BTU6 479 aa12.89□□□□□ -0.35
GPATCH4-213ENST00000527691 NIF3L1Q9GZT8 377 aa12.89□□□□□ -0.35
GPATCH4-213ENST00000527691 XYLT2Q9H1B5 865 aa12.89□□□□□ -0.35
GPATCH4-213ENST00000527691 APOBEC3GQ9HC16 384 aaKnown RBP12.89□□□□□ -0.35
GPATCH4-213ENST00000527691 CHST12Q9NRB3 414 aa12.89□□□□□ -0.35
GPATCH4-213ENST00000527691 TRIM10Q9UDY6 481 aa12.89□□□□□ -0.35
GPATCH4-213ENST00000527691 ITGA11Q9UKX5 1188 aa12.89□□□□□ -0.35
GPATCH4-213ENST00000527691 GINS2Q9Y248 185 aa12.89□□□□□ -0.35
GPATCH4-213ENST00000527691 NUB1Q9Y5A7 615 aa12.89□□□□□ -0.35
GPATCH4-213ENST00000527691 PCDHB2Q9Y5E7 798 aa12.89□□□□□ -0.35
GPATCH4-213ENST00000527691 SQORQ9Y6N5 450 aa12.89□□□□□ -0.35
GPATCH4-213ENST00000527691 FRMPD3Q5JV73 1810 aa12.89□□□□□ -0.35
GPATCH4-213ENST00000527691 CITO14578 2027 aa12.89□□□□□ -0.35
GPATCH4-213ENST00000527691 GRIN2DO15399 1336 aa12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 ANKRD62A6NC57 917 aa12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 MEFVO15553 781 aaPredicted RBP12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 CYP26A1O43174 497 aa12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 NPTXRO95502 500 aa12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 CST3P01034 146 aaPredicted RBP12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 TMEM253P0C7T8 217 aa12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 CYP11B1P15538 503 aa12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 FGFR4P22455 802 aa12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 PDE6CP51160 858 aa12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 ZNF132P52740 706 aa12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 ACLYP53396 1101 aa12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 YARSP54577 528 aaKnown RBP12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 CDR2Q01850 454 aa12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 MGAT3Q09327 533 aa12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 PTK7Q13308 1070 aa12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 TMEM132DQ14C87 1099 aa12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 TCEAL1Q15170 157 aa12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 LHX8Q68G74 356 aa12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 JADE1Q6IE81 842 aa12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 PPP1R2P3Q6NXS1 205 aa12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 GPIHBP1Q8IV16 184 aa12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 GLYCTKQ8IVS8 523 aa12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 ARRDC4Q8NCT1 418 aa12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 CXorf38Q8TB03 319 aa12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 U2AF1L4Q8WU68 220 aaKnown RBP12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 UBE2Q2Q8WVN8 375 aa12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 TMEM40Q8WWA1 233 aa12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 NOX5Q96PH1 765 aa12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 ALS2CR12Q96Q35 445 aa12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 SENP6Q9GZR1 1112 aaPredicted RBP12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 ISCUQ9H1K1 167 aa12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 CDY2AQ9Y6F7 541 aa12.88□□□□□ -0.35
GPATCH4-213ENST00000527691 RTN2O75298 545 aa12.87□□□□□ -0.35
GPATCH4-213ENST00000527691 SGPL1O95470 568 aa12.87□□□□□ -0.35
GPATCH4-213ENST00000527691 NFICP08651 508 aa12.87□□□□□ -0.35
GPATCH4-213ENST00000527691 CHRNB2P17787 502 aa12.87□□□□□ -0.35
GPATCH4-213ENST00000527691 USP8P40818 1118 aa12.87□□□□□ -0.35
GPATCH4-213ENST00000527691 MYL6P60660 151 aa12.87□□□□□ -0.35
GPATCH4-213ENST00000527691 ITGA7Q13683 1181 aa12.87□□□□□ -0.35
GPATCH4-213ENST00000527691 ZBTB6Q15916 424 aa12.87□□□□□ -0.35
GPATCH4-213ENST00000527691 PTGISQ16647 500 aa12.87□□□□□ -0.35
GPATCH4-213ENST00000527691 ZNF699Q32M78 642 aa12.87□□□□□ -0.35
GPATCH4-213ENST00000527691 XKR4Q5GH76 650 aa12.87□□□□□ -0.35
GPATCH4-213ENST00000527691 FAM47CQ5HY64 1035 aa12.87□□□□□ -0.35
GPATCH4-213ENST00000527691 FAM26DQ5JW98 314 aa12.87□□□□□ -0.35
GPATCH4-213ENST00000527691 UBXN11Q5T124 520 aa12.87□□□□□ -0.35
GPATCH4-213ENST00000527691 PAPD7Q5XG87 772 aaKnown RBP12.87□□□□□ -0.35
GPATCH4-213ENST00000527691 SPOPLQ6IQ16 392 aa12.87□□□□□ -0.35
GPATCH4-213ENST00000527691 ALKAL1Q6UXT8 129 aa12.87□□□□□ -0.35
GPATCH4-213ENST00000527691 NOP9Q86U38 636 aaKnown RBP12.87□□□□□ -0.35
GPATCH4-213ENST00000527691 SLC47A2Q86VL8 602 aa12.87□□□□□ -0.35
GPATCH4-213ENST00000527691 FAM228AQ86W67 206 aa12.87□□□□□ -0.35
GPATCH4-213ENST00000527691 TTC39CQ8N584 583 aa12.87□□□□□ -0.35
GPATCH4-213ENST00000527691 C1orf127Q8N9H9 656 aa12.87□□□□□ -0.35
GPATCH4-213ENST00000527691 SLC43A3Q8NBI5 491 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms