RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 SNRNP48Q6IEG0 339 aaKnown RBP9.89□□□□□ -0.83
CTNND1-213ENST00000526357 LRIG3Q6UXM1 1119 aa9.89□□□□□ -0.83
CTNND1-213ENST00000526357 CCDC103Q8IW40 242 aa9.89□□□□□ -0.83
CTNND1-213ENST00000526357 GSPT2Q8IYD1 628 aaKnown RBP9.89□□□□□ -0.83
CTNND1-213ENST00000526357 DDX47Q9H0S4 455 aaKnown RBP9.89□□□□□ -0.83
CTNND1-213ENST00000526357 OSBPL3Q9H4L5 887 aa9.89□□□□□ -0.83
CTNND1-213ENST00000526357 RBAKQ9NYW8 714 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-213ENST00000526357 NCK2O43639 380 aa9.89□□□□□ -0.83
CTNND1-213ENST00000526357 GUCA1AP43080 201 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-213ENST00000526357 CDC42EP1Q00587 391 aa9.89□□□□□ -0.83
CTNND1-213ENST00000526357 SDE2Q6IQ49 451 aa9.89□□□□□ -0.83
CTNND1-213ENST00000526357 CCT7Q99832 543 aa9.89□□□□□ -0.83
CTNND1-213ENST00000526357 TASP1Q9H6P5 420 aa9.89□□□□□ -0.83
CTNND1-213ENST00000526357 MTO1Q9Y2Z2 717 aaKnown RBP9.89□□□□□ -0.83
CTNND1-213ENST00000526357 STK36Q9NRP7 1315 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 USP17L5A8MUK1 530 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 KCNA3P22001 575 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 IRX1P78414 480 aaPredicted RBP9.88□□□□□ -0.83
CTNND1-213ENST00000526357 GRAPQ13588 217 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 PFKFB3Q16875 520 aaPredicted RBP9.88□□□□□ -0.83
CTNND1-213ENST00000526357 SWSAP1Q6NVH7 229 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 MICU2Q8IYU8 434 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 PGBD3Q8N328 593 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 GRAPLQ8TC17 118 aaPredicted RBP9.88□□□□□ -0.83
CTNND1-213ENST00000526357 SPATA33Q96N06 139 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 MED15Q96RN5 788 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 AGPAT1Q99943 283 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 ZNF608Q9ULD9 1512 aaPredicted RBP9.88□□□□□ -0.83
CTNND1-213ENST00000526357 EFNA5P52803 228 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 SESN2P58004 480 aaPredicted RBP9.88□□□□□ -0.83
CTNND1-213ENST00000526357 PLOD1Q02809 727 aaPredicted RBP9.88□□□□□ -0.83
CTNND1-213ENST00000526357 CNTN1Q12860 1018 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 KDELC2Q7Z4H8 507 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 PARVBQ9HBI1 364 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 MAN1C1Q9NR34 630 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 GABBR1Q9UBS5 961 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 ADAM30Q9UKF2 790 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 ZHX2Q9Y6X8 837 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 A0A087WWV3 80 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 TMEM191CA6NGB0 347 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 CFAP99D6REC4 459 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 KLC1Q07866 573 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 SMAD1Q15797 465 aaKnown RBP9.88□□□□□ -0.83
CTNND1-213ENST00000526357 OLFML2BQ68BL8 750 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 RCSD1Q6JBY9 416 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 FAM196AQ6ZSG2 479 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 GAS2L3Q86XJ1 694 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 C10orf53Q8N6V4 93 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 IL17REQ8NFR9 667 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.88□□□□□ -0.83
CTNND1-213ENST00000526357 RPAP3Q9H6T3 665 aaPredicted RBP9.88□□□□□ -0.83
CTNND1-213ENST00000526357 ARHGEF3Q9NR81 526 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 LATS2Q9NRM7 1088 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 PSMC3IPQ9P2W1 217 aaPredicted RBP9.88□□□□□ -0.83
CTNND1-213ENST00000526357 KIAA0556O60303 1618 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 TRIM49BA6NDI0 452 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 ALDH1A2O94788 518 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 PLEKHA8P1O95397 391 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 FGFR4P22455 802 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 CYP2C19P33261 490 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 CUL4AQ13619 759 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 PTRHD1Q6GMV3 140 aaKnown RBP9.88□□□□□ -0.83
CTNND1-213ENST00000526357 TMEM154Q6P9G4 183 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 KCNV1Q6PIU1 500 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 KRT77Q7Z794 578 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 MUC3BQ9H195 1237 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 ALG13Q9NP73 1137 aaKnown RBP9.88□□□□□ -0.83
CTNND1-213ENST00000526357 SEC31BQ9NQW1 1179 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 UTP6Q9NYH9 597 aaKnown RBP9.88□□□□□ -0.83
CTNND1-213ENST00000526357 HSPBP1Q9NZL4 362 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 WDR35Q9P2L0 1181 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 FAM47E-STBD1D6RA91 191 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 USP1O94782 785 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 DLGAP3O95886 979 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 GH2P01242 217 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 ATP1A3P13637 1013 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 ANKS6Q68DC2 871 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 DDI1Q8WTU0 396 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 ARHGEF26Q96DR7 871 aa9.88□□□□□ -0.83
CTNND1-213ENST00000526357 AGO2Q9UKV8 859 aaKnown RBP9.88□□□□□ -0.83
CTNND1-213ENST00000526357 ADAMTS12P58397 1594 aa9.87□□□□□ -0.83
CTNND1-213ENST00000526357 ERVV-1B6SEH8 477 aa9.87□□□□□ -0.83
CTNND1-213ENST00000526357 PRCPP42785 496 aa9.87□□□□□ -0.83
CTNND1-213ENST00000526357 SLC16A1P53985 500 aa9.87□□□□□ -0.83
CTNND1-213ENST00000526357 BYSLQ13895 437 aaKnown RBP9.87□□□□□ -0.83
CTNND1-213ENST00000526357 TTC39BQ5VTQ0 682 aaPredicted RBP9.87□□□□□ -0.83
CTNND1-213ENST00000526357 ZNF544Q6NX49 715 aa9.87□□□□□ -0.83
CTNND1-213ENST00000526357 TRIM65Q6PJ69 517 aa9.87□□□□□ -0.83
CTNND1-213ENST00000526357 FRMD5Q7Z6J6 570 aa9.87□□□□□ -0.83
CTNND1-213ENST00000526357 CCDC60Q8IWA6 550 aaPredicted RBP9.87□□□□□ -0.83
CTNND1-213ENST00000526357 STKLD1Q8NE28 680 aa9.87□□□□□ -0.83
CTNND1-213ENST00000526357 EPN3Q9H201 632 aa9.87□□□□□ -0.83
CTNND1-213ENST00000526357 NPHS2Q9NP85 383 aa9.87□□□□□ -0.83
CTNND1-213ENST00000526357 F8W810 466 aa9.87□□□□□ -0.83
CTNND1-213ENST00000526357 STRNO43815 780 aa9.87□□□□□ -0.83
CTNND1-213ENST00000526357 SPRP35270 261 aaPredicted RBP9.87□□□□□ -0.83
CTNND1-213ENST00000526357 CACNB2Q08289 660 aaPredicted RBP9.87□□□□□ -0.83
CTNND1-213ENST00000526357 ZNF513Q8N8E2 541 aaPredicted RBP9.87□□□□□ -0.83
CTNND1-213ENST00000526357 SCFD2Q8WU76 684 aa9.87□□□□□ -0.83
CTNND1-213ENST00000526357 TIPINQ9BVW5 301 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms