RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 FSCN2O14926 492 aa13.4□□□□□ -0.26
CCS-202ENST00000525435 NCK2O43639 380 aa13.4□□□□□ -0.26
CCS-202ENST00000525435 SOD2P04179 222 aa13.4□□□□□ -0.26
CCS-202ENST00000525435 NFICP08651 508 aa13.4□□□□□ -0.26
CCS-202ENST00000525435 CD44P16070 742 aaKnown RBP13.4□□□□□ -0.26
CCS-202ENST00000525435 PSMC2P35998 433 aaKnown RBP13.4□□□□□ -0.26
CCS-202ENST00000525435 CLCNKBP51801 687 aa13.4□□□□□ -0.26
CCS-202ENST00000525435 KLHL40Q2TBA0 621 aa13.4□□□□□ -0.26
CCS-202ENST00000525435 TIGD5Q53EQ6 642 aa13.4□□□□□ -0.26
CCS-202ENST00000525435 ANKRD40Q6AI12 368 aa13.4□□□□□ -0.26
CCS-202ENST00000525435 INTS8Q75QN2 995 aaKnown RBP13.4□□□□□ -0.26
CCS-202ENST00000525435 TMEM173Q86WV6 379 aaPredicted RBP13.4□□□□□ -0.26
CCS-202ENST00000525435 WDR49Q8IV35 697 aa13.4□□□□□ -0.26
CCS-202ENST00000525435 RNF168Q8IYW5 571 aaPredicted RBP13.4□□□□□ -0.26
CCS-202ENST00000525435 VPS52Q8N1B4 723 aa13.4□□□□□ -0.26
CCS-202ENST00000525435 MRPL43Q8N983 215 aaKnown RBP13.4□□□□□ -0.26
CCS-202ENST00000525435 RDH13Q8NBN7 331 aa13.4□□□□□ -0.26
CCS-202ENST00000525435 GDPD5Q8WTR4 605 aa13.4□□□□□ -0.26
CCS-202ENST00000525435 PPP2R3CQ969Q6 453 aa13.4□□□□□ -0.26
CCS-202ENST00000525435 C18orf25Q96B23 403 aaPredicted RBP13.4□□□□□ -0.26
CCS-202ENST00000525435 PDE11AQ9HCR9 933 aa13.4□□□□□ -0.26
CCS-202ENST00000525435 CHST7Q9NS84 486 aa13.4□□□□□ -0.26
CCS-202ENST00000525435 INTS13Q9NVM9 706 aa13.4□□□□□ -0.26
CCS-202ENST00000525435 DPP3Q9NY33 737 aa13.4□□□□□ -0.26
CCS-202ENST00000525435 DACH1Q9UI36 760 aa13.4□□□□□ -0.26
CCS-202ENST00000525435 STXBP5LQ9Y2K9 1186 aa13.4□□□□□ -0.26
CCS-202ENST00000525435 SF3B1O75533 1304 aaKnown RBP eCLIP13.39□□□□□ -0.27
CCS-202ENST00000525435 FSD2A1L4K1 749 aa13.39□□□□□ -0.27
CCS-202ENST00000525435 PIRO00625 290 aa13.39□□□□□ -0.27
CCS-202ENST00000525435 LETM1O95202 739 aaPredicted RBP13.39□□□□□ -0.27
CCS-202ENST00000525435 FGFR1OPO95684 399 aaKnown RBP13.39□□□□□ -0.27
CCS-202ENST00000525435 C1RP00736 705 aa13.39□□□□□ -0.27
CCS-202ENST00000525435 CTSAP10619 480 aa13.39□□□□□ -0.27
CCS-202ENST00000525435 FOSL2P15408 326 aa13.39□□□□□ -0.27
CCS-202ENST00000525435 IGFBP4P22692 258 aa13.39□□□□□ -0.27
CCS-202ENST00000525435 DNAJB1P25685 340 aa13.39□□□□□ -0.27
CCS-202ENST00000525435 ERCC5P28715 1186 aaPredicted RBP13.39□□□□□ -0.27
CCS-202ENST00000525435 NLRP12P59046 1061 aa13.39□□□□□ -0.27
CCS-202ENST00000525435 TFAMQ00059 246 aaKnown RBP13.39□□□□□ -0.27
CCS-202ENST00000525435 SPAG1Q07617 926 aa13.39□□□□□ -0.27
CCS-202ENST00000525435 PAK1Q13153 545 aa13.39□□□□□ -0.27
CCS-202ENST00000525435 USP41Q3LFD5 358 aa13.39□□□□□ -0.27
CCS-202ENST00000525435 CEP135Q66GS9 1140 aa13.39□□□□□ -0.27
CCS-202ENST00000525435 TTI2Q6NXR4 508 aa13.39□□□□□ -0.27
CCS-202ENST00000525435 FUT10Q6P4F1 479 aa13.39□□□□□ -0.27
CCS-202ENST00000525435 PDXDC1Q6P996 788 aa13.39□□□□□ -0.27
CCS-202ENST00000525435 FILIP1Q7Z7B0 1213 aa13.39□□□□□ -0.27
CCS-202ENST00000525435 EFCAB13Q8IY85 973 aa13.39□□□□□ -0.27
CCS-202ENST00000525435 MICAL1Q8TDZ2 1067 aa13.39□□□□□ -0.27
CCS-202ENST00000525435 PARD3BQ8TEW8 1205 aa13.39□□□□□ -0.27
CCS-202ENST00000525435 NOC3LQ8WTT2 800 aaKnown RBP13.39□□□□□ -0.27
CCS-202ENST00000525435 NELFBQ8WX92 580 aa13.39□□□□□ -0.27
CCS-202ENST00000525435 MYLIPQ8WY64 445 aa13.39□□□□□ -0.27
CCS-202ENST00000525435 CEP63Q96MT8 703 aa13.39□□□□□ -0.27
CCS-202ENST00000525435 PAAF1Q9BRP4 392 aa13.39□□□□□ -0.27
CCS-202ENST00000525435 RWDD2AQ9UIY3 292 aa13.39□□□□□ -0.27
CCS-202ENST00000525435 ITGA11Q9UKX5 1188 aa13.39□□□□□ -0.27
CCS-202ENST00000525435 GBF1Q92538 1859 aa13.38□□□□□ -0.27
CCS-202ENST00000525435 ARHGEF37A1IGU5 675 aa13.38□□□□□ -0.27
CCS-202ENST00000525435 SLC16A3O15427 465 aaKnown RBP13.38□□□□□ -0.27
CCS-202ENST00000525435 AKAP3O75969 853 aa13.38□□□□□ -0.27
CCS-202ENST00000525435 KIF4AO95239 1232 aa13.38□□□□□ -0.27
CCS-202ENST00000525435 CXCL14O95715 111 aa13.38□□□□□ -0.27
CCS-202ENST00000525435 GNA14O95837 355 aa13.38□□□□□ -0.27
CCS-202ENST00000525435 TNNC2P02585 160 aa13.38□□□□□ -0.27
CCS-202ENST00000525435 EPB41P11171 864 aaKnown RBP13.38□□□□□ -0.27
CCS-202ENST00000525435 KRT13P13646 458 aa13.38□□□□□ -0.27
CCS-202ENST00000525435 TNNI1P19237 187 aa13.38□□□□□ -0.27
CCS-202ENST00000525435 PNPLA4P41247 253 aa13.38□□□□□ -0.27
CCS-202ENST00000525435 CASP4P49662 377 aa13.38□□□□□ -0.27
CCS-202ENST00000525435 ERVFC1P60507 584 aa13.38□□□□□ -0.27
CCS-202ENST00000525435 RBP5P82980 135 aa13.38□□□□□ -0.27
CCS-202ENST00000525435 SMC1AQ14683 1233 aaKnown RBP13.38□□□□□ -0.27
CCS-202ENST00000525435 KIAA0319Q5VV43 1072 aa13.38□□□□□ -0.27
CCS-202ENST00000525435 C9orf57Q5W0N0 161 aa13.38□□□□□ -0.27
CCS-202ENST00000525435 CD300LGQ6UXG3 332 aa13.38□□□□□ -0.27
CCS-202ENST00000525435 TMC7Q7Z402 723 aa13.38□□□□□ -0.27
CCS-202ENST00000525435 FAM186BQ8IYM0 893 aa13.38□□□□□ -0.27
CCS-202ENST00000525435 BCL7CQ8WUZ0 217 aaPredicted RBP13.38□□□□□ -0.27
CCS-202ENST00000525435 CCDC127Q96BQ5 260 aa13.38□□□□□ -0.27
CCS-202ENST00000525435 ANKRD36BP1Q96IX9 119 aa13.38□□□□□ -0.27
CCS-202ENST00000525435 CDCA3Q99618 268 aaPredicted RBP13.38□□□□□ -0.27
CCS-202ENST00000525435 CGRRF1Q99675 332 aa13.38□□□□□ -0.27
CCS-202ENST00000525435 TCF25Q9BQ70 676 aa13.38□□□□□ -0.27
CCS-202ENST00000525435 HERC2P3Q9BVR0 1158 aa13.38□□□□□ -0.27
CCS-202ENST00000525435 GPR62Q9BZJ7 368 aa13.38□□□□□ -0.27
CCS-202ENST00000525435 ZBP1Q9H171 429 aa13.38□□□□□ -0.27
CCS-202ENST00000525435 NSUN3Q9H649 340 aaKnown RBP13.38□□□□□ -0.27
CCS-202ENST00000525435 METTL14Q9HCE5 456 aaKnown RBP13.38□□□□□ -0.27
CCS-202ENST00000525435 TUBGCP4Q9UGJ1 667 aa13.38□□□□□ -0.27
CCS-202ENST00000525435 NUB1Q9Y5A7 615 aa13.38□□□□□ -0.27
CCS-202ENST00000525435 SYN3O14994 580 aa13.37□□□□□ -0.27
CCS-202ENST00000525435 LILRB3O75022 631 aa13.37□□□□□ -0.27
CCS-202ENST00000525435 TMEM191BP0C7N4 346 aa13.37□□□□□ -0.27
CCS-202ENST00000525435 DLATP10515 647 aaKnown RBP13.37□□□□□ -0.27
CCS-202ENST00000525435 GTF2H1P32780 548 aa13.37□□□□□ -0.27
CCS-202ENST00000525435 AARSP49588 968 aaKnown RBP eCLIP13.37□□□□□ -0.27
CCS-202ENST00000525435 VAMP7P51809 220 aa13.37□□□□□ -0.27
CCS-202ENST00000525435 PMS1P54277 932 aaKnown RBP13.37□□□□□ -0.27
CCS-202ENST00000525435 WNT7BP56706 349 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 200.4 ms