RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 HIDE1A8MVS5 230 aa13.62□□□□□ -0.23
VEGFA-225ENST00000523950 PDXKO00764 312 aa13.62□□□□□ -0.23
VEGFA-225ENST00000523950 LILRB3O75022 631 aa13.62□□□□□ -0.23
VEGFA-225ENST00000523950 GADD45BO75293 160 aaPredicted RBP13.62□□□□□ -0.23
VEGFA-225ENST00000523950 CA8P35219 290 aa13.62□□□□□ -0.23
VEGFA-225ENST00000523950 MRPS5P82675 430 aaKnown RBP13.62□□□□□ -0.23
VEGFA-225ENST00000523950 ADAM15Q13444 863 aa13.62□□□□□ -0.23
VEGFA-225ENST00000523950 PNOCQ13519 176 aa13.62□□□□□ -0.23
VEGFA-225ENST00000523950 MYBPC2Q14324 1141 aa13.62□□□□□ -0.23
VEGFA-225ENST00000523950 PUS10Q3MIT2 529 aaKnown RBP13.62□□□□□ -0.23
VEGFA-225ENST00000523950 KIAA0319Q5VV43 1072 aa13.62□□□□□ -0.23
VEGFA-225ENST00000523950 JADE1Q6IE81 842 aa13.62□□□□□ -0.23
VEGFA-225ENST00000523950 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.62□□□□□ -0.23
VEGFA-225ENST00000523950 GUF1Q8N442 669 aaKnown RBP13.62□□□□□ -0.23
VEGFA-225ENST00000523950 XXYLT1Q8NBI6 393 aa13.62□□□□□ -0.23
VEGFA-225ENST00000523950 SPATA20Q8TB22 786 aa13.62□□□□□ -0.23
VEGFA-225ENST00000523950 SMARCE1Q969G3 411 aa13.62□□□□□ -0.23
VEGFA-225ENST00000523950 C18orf25Q96B23 403 aaPredicted RBP13.62□□□□□ -0.23
VEGFA-225ENST00000523950 FAM212AQ96EL1 285 aa13.62□□□□□ -0.23
VEGFA-225ENST00000523950 SAAL1Q96ER3 474 aa13.62□□□□□ -0.23
VEGFA-225ENST00000523950 GPR62Q9BZJ7 368 aa13.62□□□□□ -0.23
VEGFA-225ENST00000523950 GOLGA2P5Q9HBQ8 144 aa13.62□□□□□ -0.23
VEGFA-225ENST00000523950 RXFP1Q9HBX9 757 aa13.62□□□□□ -0.23
VEGFA-225ENST00000523950 CLDND1Q9NY35 253 aa13.62□□□□□ -0.23
VEGFA-225ENST00000523950 CACNG4Q9UBN1 327 aa13.62□□□□□ -0.23
VEGFA-225ENST00000523950 TUBGCP4Q9UGJ1 667 aa13.62□□□□□ -0.23
VEGFA-225ENST00000523950 PCDHGC5Q9Y5F6 944 aa13.62□□□□□ -0.23
VEGFA-225ENST00000523950 VWA8A3KMH1 1905 aa13.61□□□□□ -0.23
VEGFA-225ENST00000523950 F8W810 466 aa13.61□□□□□ -0.23
VEGFA-225ENST00000523950 SYN3O14994 580 aa13.61□□□□□ -0.23
VEGFA-225ENST00000523950 CALUO43852 315 aaPredicted RBP13.61□□□□□ -0.23
VEGFA-225ENST00000523950 ADH1AP07327 375 aa13.61□□□□□ -0.23
VEGFA-225ENST00000523950 NFICP08651 508 aa13.61□□□□□ -0.23
VEGFA-225ENST00000523950 KCNC3Q14003 757 aa13.61□□□□□ -0.23
VEGFA-225ENST00000523950 LEXMQ3ZCV2 418 aa13.61□□□□□ -0.23
VEGFA-225ENST00000523950 COBLL1Q53SF7 1204 aa13.61□□□□□ -0.23
VEGFA-225ENST00000523950 FAM171A1Q5VUB5 890 aa13.61□□□□□ -0.23
VEGFA-225ENST00000523950 RBM23Q86U06 439 aaKnown RBP13.61□□□□□ -0.23
VEGFA-225ENST00000523950 SLC9A9Q8IVB4 645 aa13.61□□□□□ -0.23
VEGFA-225ENST00000523950 CACTINQ8WUQ7 758 aaKnown RBP13.61□□□□□ -0.23
VEGFA-225ENST00000523950 PIK3R5Q8WYR1 880 aa13.61□□□□□ -0.23
VEGFA-225ENST00000523950 RABGGTAQ92696 567 aa13.61□□□□□ -0.23
VEGFA-225ENST00000523950 CASP10Q92851 521 aa13.61□□□□□ -0.23
VEGFA-225ENST00000523950 TTPALQ9BTX7 342 aa13.61□□□□□ -0.23
VEGFA-225ENST00000523950 KCTD10Q9H3F6 313 aa13.61□□□□□ -0.23
VEGFA-225ENST00000523950 PCIF1Q9H4Z3 704 aa13.61□□□□□ -0.23
VEGFA-225ENST00000523950 IGFLR1Q9H665 355 aa13.61□□□□□ -0.23
VEGFA-225ENST00000523950 PRDM6Q9NQX0 595 aa13.61□□□□□ -0.23
VEGFA-225ENST00000523950 FNIP2Q9P278 1114 aa13.61□□□□□ -0.23
VEGFA-225ENST00000523950 NUB1Q9Y5A7 615 aa13.61□□□□□ -0.23
VEGFA-225ENST00000523950 MYO7AQ13402 2215 aa13.61□□□□□ -0.23
VEGFA-225ENST00000523950 ARHGEF37A1IGU5 675 aa13.6□□□□□ -0.23
VEGFA-225ENST00000523950 PER2O15055 1255 aa13.6□□□□□ -0.23
VEGFA-225ENST00000523950 CLASP2O75122 1294 aaKnown RBP13.6□□□□□ -0.23
VEGFA-225ENST00000523950 PRPF40AO75400 957 aaKnown RBP13.6□□□□□ -0.23
VEGFA-225ENST00000523950 KCNA5P22460 613 aa13.6□□□□□ -0.23
VEGFA-225ENST00000523950 FGFR3P22607 806 aa13.6□□□□□ -0.23
VEGFA-225ENST00000523950 PPP1R2P41236 205 aa13.6□□□□□ -0.23
VEGFA-225ENST00000523950 NDUFV1P49821 464 aa13.6□□□□□ -0.23
VEGFA-225ENST00000523950 SPAG1Q07617 926 aa13.6□□□□□ -0.23
VEGFA-225ENST00000523950 NFIL3Q16649 462 aa13.6□□□□□ -0.23
VEGFA-225ENST00000523950 ZNF658Q5TYW1 1059 aaPredicted RBP13.6□□□□□ -0.23
VEGFA-225ENST00000523950 ELMSAN1Q6PJG2 1045 aa13.6□□□□□ -0.23
VEGFA-225ENST00000523950 CD300LGQ6UXG3 332 aa13.6□□□□□ -0.23
VEGFA-225ENST00000523950 TAS1R1Q7RTX1 841 aa13.6□□□□□ -0.23
VEGFA-225ENST00000523950 C3orf58Q8NDZ4 430 aa13.6□□□□□ -0.23
VEGFA-225ENST00000523950 HASPINQ8TF76 798 aa13.6□□□□□ -0.23
VEGFA-225ENST00000523950 SUSD3Q96L08 255 aa13.6□□□□□ -0.23
VEGFA-225ENST00000523950 KLHL5Q96PQ7 755 aa13.6□□□□□ -0.23
VEGFA-225ENST00000523950 DZANK1Q9NVP4 752 aa13.6□□□□□ -0.23
VEGFA-225ENST00000523950 DPP7Q9UHL4 492 aa13.6□□□□□ -0.23
VEGFA-225ENST00000523950 TRAF3IP3Q9Y228 551 aa13.6□□□□□ -0.23
VEGFA-225ENST00000523950 FAM50BQ9Y247 325 aa13.6□□□□□ -0.23
VEGFA-225ENST00000523950 PCDHA5Q9Y5H7 936 aa13.6□□□□□ -0.23
VEGFA-225ENST00000523950 HCFC2Q9Y5Z7 792 aa13.6□□□□□ -0.23
VEGFA-225ENST00000523950 COL6A3P12111 3177 aa13.6□□□□□ -0.23
VEGFA-225ENST00000523950 ANO9A1A5B4 782 aa13.59□□□□□ -0.23
VEGFA-225ENST00000523950 GOLGA8IPA6NC78 632 aa13.59□□□□□ -0.23
VEGFA-225ENST00000523950 GOLGA8JA6NMD2 632 aa13.59□□□□□ -0.23
VEGFA-225ENST00000523950 C2CD2LO14523 706 aa13.59□□□□□ -0.23
VEGFA-225ENST00000523950 CLIC2O15247 247 aa13.59□□□□□ -0.23
VEGFA-225ENST00000523950 TBX10O75333 385 aa13.59□□□□□ -0.23
VEGFA-225ENST00000523950 GLP2RO95838 553 aa13.59□□□□□ -0.23
VEGFA-225ENST00000523950 CNPP09543 421 aaKnown RBP13.59□□□□□ -0.23
VEGFA-225ENST00000523950 HOXB8P17481 243 aaPredicted RBP13.59□□□□□ -0.23
VEGFA-225ENST00000523950 MCM4P33991 863 aa13.59□□□□□ -0.23
VEGFA-225ENST00000523950 GTF2F1P35269 517 aaKnown RBP eCLIP13.59□□□□□ -0.233e-11■■■■■ 42.3
VEGFA-225ENST00000523950 LTBRP36941 435 aa13.59□□□□□ -0.23
VEGFA-225ENST00000523950 AARSP49588 968 aaKnown RBP eCLIP13.59□□□□□ -0.231e-6■■■■□ 20.6
VEGFA-225ENST00000523950 SNRNP35Q16560 246 aaKnown RBP13.59□□□□□ -0.23
VEGFA-225ENST00000523950 RTP2Q5QGT7 225 aa13.59□□□□□ -0.23
VEGFA-225ENST00000523950 C9orf57Q5W0N0 161 aa13.59□□□□□ -0.23
VEGFA-225ENST00000523950 ANKS3Q6ZW76 656 aa13.59□□□□□ -0.23
VEGFA-225ENST00000523950 CBWD2Q8IUF1 395 aa13.59□□□□□ -0.23
VEGFA-225ENST00000523950 EFCAB13Q8IY85 973 aa13.59□□□□□ -0.23
VEGFA-225ENST00000523950 APPL2Q8NEU8 664 aa13.59□□□□□ -0.23
VEGFA-225ENST00000523950 AUTS2Q8WXX7 1259 aa13.59□□□□□ -0.23
VEGFA-225ENST00000523950 RIN2Q8WYP3 895 aaPredicted RBP13.59□□□□□ -0.23
VEGFA-225ENST00000523950 MSLNLQ96KJ4 702 aa13.59□□□□□ -0.23
VEGFA-225ENST00000523950 ASB2Q96Q27 587 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms