RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 QSER1Q2KHR3 1735 aa5.53□□□□□ -1.52
NSMCE2-211ENST00000523549 PKD1L3Q7Z443 1732 aa5.53□□□□□ -1.52
NSMCE2-211ENST00000523549 DUOX2Q9NRD8 1548 aa5.53□□□□□ -1.52
NSMCE2-211ENST00000523549 DIRC3C9JPN6 131 aa5.52□□□□□ -1.53
NSMCE2-211ENST00000523549 CD38P28907 300 aa5.52□□□□□ -1.53
NSMCE2-211ENST00000523549 FOXI1Q12951 378 aa5.52□□□□□ -1.53
NSMCE2-211ENST00000523549 ESPNLQ6ZVH7 1005 aa5.52□□□□□ -1.53
NSMCE2-211ENST00000523549 PTF1AQ7RTS3 328 aa5.52□□□□□ -1.53
NSMCE2-211ENST00000523549 GAB3Q8WWW8 586 aa5.52□□□□□ -1.53
NSMCE2-211ENST00000523549 SREK1Q8WXA9 508 aaKnown RBP5.52□□□□□ -1.53
NSMCE2-211ENST00000523549 TEX101Q9BY14 249 aa5.52□□□□□ -1.53
NSMCE2-211ENST00000523549 R3HDMLQ9H3Y0 253 aa5.52□□□□□ -1.53
NSMCE2-211ENST00000523549 ADARB2Q9NS39 739 aaKnown RBP5.52□□□□□ -1.53
NSMCE2-211ENST00000523549 INTS7Q9NVH2 962 aaKnown RBP5.52□□□□□ -1.53
NSMCE2-211ENST00000523549 IFT57Q9NWB7 429 aa5.52□□□□□ -1.53
NSMCE2-211ENST00000523549 ZKSCAN5Q9Y2L8 839 aa5.52□□□□□ -1.53
NSMCE2-211ENST00000523549 TNRC6CQ9HCJ0 1690 aaKnown RBP5.52□□□□□ -1.53
NSMCE2-211ENST00000523549 MTUS2Q5JR59 1369 aa5.52□□□□□ -1.53
NSMCE2-211ENST00000523549 TECPR2O15040 1411 aa5.51□□□□□ -1.53
NSMCE2-211ENST00000523549 PIPSLA2A3N6 862 aa5.51□□□□□ -1.53
NSMCE2-211ENST00000523549 ZNF185O15231 689 aa5.51□□□□□ -1.53
NSMCE2-211ENST00000523549 NDUFA10O95299 355 aa5.51□□□□□ -1.53
NSMCE2-211ENST00000523549 ZNF37AP17032 561 aaPredicted RBP5.51□□□□□ -1.53
NSMCE2-211ENST00000523549 POU3F2P20265 443 aaPredicted RBP5.51□□□□□ -1.53
NSMCE2-211ENST00000523549 SEC24CP53992 1094 aa5.51□□□□□ -1.53
NSMCE2-211ENST00000523549 DUSP2Q05923 314 aa5.51□□□□□ -1.53
NSMCE2-211ENST00000523549 PABPC4Q13310 644 aaKnown RBP eCLIP5.51□□□□□ -1.53
NSMCE2-211ENST00000523549 BMS1Q14692 1282 aaKnown RBP5.51□□□□□ -1.53
NSMCE2-211ENST00000523549 UBE3CQ15386 1083 aa5.51□□□□□ -1.53
NSMCE2-211ENST00000523549 PRR16Q569H4 304 aa5.51□□□□□ -1.53
NSMCE2-211ENST00000523549 CCDC178Q5BJE1 867 aa5.51□□□□□ -1.53
NSMCE2-211ENST00000523549 GPR158Q5T848 1215 aa5.51□□□□□ -1.53
NSMCE2-211ENST00000523549 ZKSCAN2Q63HK3 967 aa5.51□□□□□ -1.53
NSMCE2-211ENST00000523549 METRNLQ641Q3 311 aa5.51□□□□□ -1.53
NSMCE2-211ENST00000523549 LYSMD2Q8IV50 215 aa5.51□□□□□ -1.53
NSMCE2-211ENST00000523549 NXPE1Q8N323 547 aa5.51□□□□□ -1.53
NSMCE2-211ENST00000523549 FAM98AQ8NCA5 519 aaKnown RBP5.51□□□□□ -1.53
NSMCE2-211ENST00000523549 SUPT20HQ8NEM7 779 aa5.51□□□□□ -1.53
NSMCE2-211ENST00000523549 MAGEC2Q9UBF1 373 aaPredicted RBP5.51□□□□□ -1.53
NSMCE2-211ENST00000523549 CFDP1Q9UEE9 299 aaPredicted RBP5.51□□□□□ -1.53
NSMCE2-211ENST00000523549 MSRAQ9UJ68 235 aa5.51□□□□□ -1.53
NSMCE2-211ENST00000523549 USP18Q9UMW8 372 aa5.51□□□□□ -1.53
NSMCE2-211ENST00000523549 HDAC5Q9UQL6 1122 aa5.51□□□□□ -1.53
NSMCE2-211ENST00000523549 SPATA31A3Q5VYP0 1347 aa5.5□□□□□ -1.53
NSMCE2-211ENST00000523549 CASP8AP2Q9UKL3 1982 aa5.5□□□□□ -1.53
NSMCE2-211ENST00000523549 PRSS38A1L453 326 aa5.5□□□□□ -1.53
NSMCE2-211ENST00000523549 INO80B-WBP1J3KQ70 363 aa5.5□□□□□ -1.53
NSMCE2-211ENST00000523549 HSPA8P11142 646 aaKnown RBP5.5□□□□□ -1.53
NSMCE2-211ENST00000523549 HSP90B1P14625 803 aaKnown RBP5.5□□□□□ -1.53
NSMCE2-211ENST00000523549 ATXN1P54253 815 aaKnown RBP5.5□□□□□ -1.53
NSMCE2-211ENST00000523549 RNASE9P60153 205 aaKnown RBP5.5□□□□□ -1.53
NSMCE2-211ENST00000523549 KRTAP10-11P60412 298 aa5.5□□□□□ -1.53
NSMCE2-211ENST00000523549 NHLH2Q02577 135 aa5.5□□□□□ -1.53
NSMCE2-211ENST00000523549 ANKS6Q68DC2 871 aa5.5□□□□□ -1.53
NSMCE2-211ENST00000523549 PLXDC1Q8IUK5 500 aa5.5□□□□□ -1.53
NSMCE2-211ENST00000523549 SLC41A1Q8IVJ1 513 aa5.5□□□□□ -1.53
NSMCE2-211ENST00000523549 LCORLQ8N3X6 602 aa5.5□□□□□ -1.53
NSMCE2-211ENST00000523549 CHTF18Q8WVB6 975 aa5.5□□□□□ -1.53
NSMCE2-211ENST00000523549 ADAM2Q99965 735 aa5.5□□□□□ -1.53
NSMCE2-211ENST00000523549 INO80BQ9C086 356 aaPredicted RBP5.5□□□□□ -1.53
NSMCE2-211ENST00000523549 TMEM260Q9NX78 707 aa5.5□□□□□ -1.53
NSMCE2-211ENST00000523549 NUMBLQ9Y6R0 609 aa5.5□□□□□ -1.53
NSMCE2-211ENST00000523549 PARP4Q9UKK3 1724 aaKnown RBP5.5□□□□□ -1.53
NSMCE2-211ENST00000523549 UNC80Q8N2C7 3258 aa5.5□□□□□ -1.53
NSMCE2-211ENST00000523549 RRBP1Q9P2E9 1410 aaKnown RBP5.49□□□□□ -1.53
NSMCE2-211ENST00000523549 FMN2Q9NZ56 1722 aa5.49□□□□□ -1.53
NSMCE2-211ENST00000523549 MARCH11A6NNE9 402 aa5.49□□□□□ -1.53
NSMCE2-211ENST00000523549 TBKBP1A7MCY6 615 aa5.49□□□□□ -1.53
NSMCE2-211ENST00000523549 ZNF891A8MT65 544 aaPredicted RBP5.49□□□□□ -1.53
NSMCE2-211ENST00000523549 PRR5-ARHGAP8B1AHC4 643 aa5.49□□□□□ -1.53
NSMCE2-211ENST00000523549 AVPR1BP47901 424 aa5.49□□□□□ -1.53
NSMCE2-211ENST00000523549 FXR1P51114 621 aaKnown RBP eCLIP5.49□□□□□ -1.53
NSMCE2-211ENST00000523549 APBA1Q02410 837 aa5.49□□□□□ -1.53
NSMCE2-211ENST00000523549 C19orf54Q5BKX5 351 aa5.49□□□□□ -1.53
NSMCE2-211ENST00000523549 PASD1Q8IV76 773 aa5.49□□□□□ -1.53
NSMCE2-211ENST00000523549 CMTR2Q8IYT2 770 aaKnown RBP5.49□□□□□ -1.53
NSMCE2-211ENST00000523549 SH3TC2Q8TF17 1288 aa5.49□□□□□ -1.53
NSMCE2-211ENST00000523549 MRFAP1L1Q96HT8 127 aa5.49□□□□□ -1.53
NSMCE2-211ENST00000523549 CCDC141Q6ZP82 1450 aa5.49□□□□□ -1.53
NSMCE2-211ENST00000523549 SPATA31A1Q5TZJ5 1347 aa5.48□□□□□ -1.53
NSMCE2-211ENST00000523549 KCPQ6ZWJ8 1503 aa5.48□□□□□ -1.53
NSMCE2-211ENST00000523549 PHRF1Q9P1Y6 1649 aaKnown RBP5.48□□□□□ -1.53
NSMCE2-211ENST00000523549 RGPD8O14715 1765 aaPredicted RBP5.48□□□□□ -1.53
NSMCE2-211ENST00000523549 AKAP12Q02952 1782 aa5.48□□□□□ -1.53
NSMCE2-211ENST00000523549 NRP2O60462 931 aa5.48□□□□□ -1.53
NSMCE2-211ENST00000523549 GAS7O60861 476 aa5.48□□□□□ -1.53
NSMCE2-211ENST00000523549 EGR2P11161 476 aaPredicted RBP5.48□□□□□ -1.53
NSMCE2-211ENST00000523549 SOX10P56693 466 aa5.48□□□□□ -1.53
NSMCE2-211ENST00000523549 PHC1P78364 1004 aa5.48□□□□□ -1.53
NSMCE2-211ENST00000523549 PDCD4Q53EL6 469 aaKnown RBP5.48□□□□□ -1.53
NSMCE2-211ENST00000523549 FAM102AQ5T9C2 384 aaPredicted RBP5.48□□□□□ -1.53
NSMCE2-211ENST00000523549 FBXO42Q6P3S6 717 aa5.48□□□□□ -1.53
NSMCE2-211ENST00000523549 RD3Q7Z3Z2 195 aa5.48□□□□□ -1.53
NSMCE2-211ENST00000523549 ZNF610Q8N9Z0 462 aa5.48□□□□□ -1.53
NSMCE2-211ENST00000523549 SIMC1Q8NDZ2 872 aa5.48□□□□□ -1.53
NSMCE2-211ENST00000523549 CPEB3Q8NE35 698 aaKnown RBP5.48□□□□□ -1.53
NSMCE2-211ENST00000523549 NAF1Q96HR8 494 aaKnown RBP5.48□□□□□ -1.53
NSMCE2-211ENST00000523549 EVLQ9UI08 416 aaPredicted RBP5.48□□□□□ -1.53
NSMCE2-211ENST00000523549 ST20-MTHFSA0A0A6YYL1 179 aa5.47□□□□□ -1.53
NSMCE2-211ENST00000523549 LCHNA4D1U4 455 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms