RNA–Protein interactions for RNA: ENST00000521233.1

HDAC2-211, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-211ENST00000521233 ISM2Q6H9L7 571 aa13.54□□□□□ -0.24
HDAC2-211ENST00000521233 FUT10Q6P4F1 479 aa13.54□□□□□ -0.24
HDAC2-211ENST00000521233 DCLRE1AQ6PJP8 1040 aa13.54□□□□□ -0.24
HDAC2-211ENST00000521233 RBM43Q6ZSC3 357 aaKnown RBP13.54□□□□□ -0.24
HDAC2-211ENST00000521233 TMEM173Q86WV6 379 aaPredicted RBP13.54□□□□□ -0.24
HDAC2-211ENST00000521233 WDR49Q8IV35 697 aa13.54□□□□□ -0.24
HDAC2-211ENST00000521233 POF1BQ8WVV4 589 aa13.54□□□□□ -0.24
HDAC2-211ENST00000521233 C18orf25Q96B23 403 aaPredicted RBP13.54□□□□□ -0.24
HDAC2-211ENST00000521233 ANKRD36BP1Q96IX9 119 aa13.54□□□□□ -0.24
HDAC2-211ENST00000521233 CGRRF1Q99675 332 aa13.54□□□□□ -0.24
HDAC2-211ENST00000521233 MKNK1Q9BUB5 465 aa13.54□□□□□ -0.24
HDAC2-211ENST00000521233 HERC2P3Q9BVR0 1158 aa13.54□□□□□ -0.24
HDAC2-211ENST00000521233 CXCL16Q9H2A7 254 aa13.54□□□□□ -0.24
HDAC2-211ENST00000521233 NGRNQ9NPE2 291 aaKnown RBP13.54□□□□□ -0.24
HDAC2-211ENST00000521233 ENTPD7Q9NQZ7 604 aa13.54□□□□□ -0.24
HDAC2-211ENST00000521233 SSX2IPQ9Y2D8 614 aa13.54□□□□□ -0.24
HDAC2-211ENST00000521233 PLXNA4Q9HCM2 1894 aa13.54□□□□□ -0.24
HDAC2-211ENST00000521233 ARHGEF37A1IGU5 675 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 RFXAPO00287 272 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 TADA2AO75478 443 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 B3GAT3O94766 335 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 TNNC2P02585 160 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 SOD2P04179 222 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 URODP06132 367 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 EPB41P11171 864 aaKnown RBP13.53□□□□□ -0.24
HDAC2-211ENST00000521233 KRT13P13646 458 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 BMP6P22004 513 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 PSMC2P35998 433 aaKnown RBP13.53□□□□□ -0.24
HDAC2-211ENST00000521233 CLCNKBP51801 687 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 AP3M2P53677 418 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 TFAMQ00059 246 aaKnown RBP13.53□□□□□ -0.24
HDAC2-211ENST00000521233 FKBP3Q00688 224 aaKnown RBP13.53□□□□□ -0.24
HDAC2-211ENST00000521233 CREMQ03060 361 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 ENPEPQ07075 957 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 SPAG1Q07617 926 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 ADAM9Q13443 819 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 SMC1AQ14683 1233 aaKnown RBP13.53□□□□□ -0.24
HDAC2-211ENST00000521233 KLHL40Q2TBA0 621 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 CEP135Q66GS9 1140 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 KLHL10Q6JEL2 608 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 INTS8Q75QN2 995 aaKnown RBP13.53□□□□□ -0.24
HDAC2-211ENST00000521233 EFCAB13Q8IY85 973 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 GPR65Q8IYL9 337 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 VPS52Q8N1B4 723 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 ZSWIM2Q8NEG5 633 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 BCL7CQ8WUZ0 217 aaPredicted RBP13.53□□□□□ -0.24
HDAC2-211ENST00000521233 NELFBQ8WX92 580 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 MFSD14AQ96MC6 490 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 ZNF560Q96MR9 790 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 TCF25Q9BQ70 676 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 NSUN3Q9H649 340 aaKnown RBP13.53□□□□□ -0.24
HDAC2-211ENST00000521233 GOLGA2P5Q9HBQ8 144 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 PDE11AQ9HCR9 933 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 ITGA11Q9UKX5 1188 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 CTNND2Q9UQB3 1225 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 R3HCC1Q9Y3T6 440 aaKnown RBP13.53□□□□□ -0.24
HDAC2-211ENST00000521233 NUB1Q9Y5A7 615 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 MTCH2Q9Y6C9 303 aa13.53□□□□□ -0.24
HDAC2-211ENST00000521233 PPP1R3GB7ZBB8 358 aa13.52□□□□□ -0.25
HDAC2-211ENST00000521233 TULP1O00294 542 aaPredicted RBP13.52□□□□□ -0.25
HDAC2-211ENST00000521233 FSCN2O14926 492 aa13.52□□□□□ -0.25
HDAC2-211ENST00000521233 DLATP10515 647 aaKnown RBP13.52□□□□□ -0.25
HDAC2-211ENST00000521233 CD44P16070 742 aaKnown RBP13.52□□□□□ -0.25
HDAC2-211ENST00000521233 PNPLA4P41247 253 aa13.52□□□□□ -0.25
HDAC2-211ENST00000521233 GLUD2P49448 558 aa13.52□□□□□ -0.25
HDAC2-211ENST00000521233 ADGRE1Q14246 886 aa13.52□□□□□ -0.25
HDAC2-211ENST00000521233 DUOXA2Q1HG44 320 aa13.52□□□□□ -0.25
HDAC2-211ENST00000521233 SKOR2Q2VWA4 1001 aaPredicted RBP13.52□□□□□ -0.25
HDAC2-211ENST00000521233 USP41Q3LFD5 358 aa13.52□□□□□ -0.25
HDAC2-211ENST00000521233 CT47A1Q5JQC4 288 aaPredicted RBP13.52□□□□□ -0.25
HDAC2-211ENST00000521233 PDXDC1Q6P996 788 aa13.52□□□□□ -0.25
HDAC2-211ENST00000521233 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.52□□□□□ -0.25
HDAC2-211ENST00000521233 TMC7Q7Z402 723 aa13.52□□□□□ -0.25
HDAC2-211ENST00000521233 ZC3H3Q8IXZ2 948 aaKnown RBP13.52□□□□□ -0.25
HDAC2-211ENST00000521233 FAM186BQ8IYM0 893 aa13.52□□□□□ -0.25
HDAC2-211ENST00000521233 RDH13Q8NBN7 331 aa13.52□□□□□ -0.25
HDAC2-211ENST00000521233 TMC2Q8TDI7 906 aa13.52□□□□□ -0.25
HDAC2-211ENST00000521233 CEP63Q96MT8 703 aa13.52□□□□□ -0.25
HDAC2-211ENST00000521233 PAAF1Q9BRP4 392 aa13.52□□□□□ -0.25
HDAC2-211ENST00000521233 ZBP1Q9H171 429 aa13.52□□□□□ -0.25
HDAC2-211ENST00000521233 INTS13Q9NVM9 706 aa13.52□□□□□ -0.25
HDAC2-211ENST00000521233 DPP3Q9NY33 737 aa13.52□□□□□ -0.25
HDAC2-211ENST00000521233 STXBP5LQ9Y2K9 1186 aa13.52□□□□□ -0.25
HDAC2-211ENST00000521233 FGFR1OPO95684 399 aaKnown RBP13.51□□□□□ -0.25
HDAC2-211ENST00000521233 CTSAP10619 480 aa13.51□□□□□ -0.25
HDAC2-211ENST00000521233 TNNI1P19237 187 aa13.51□□□□□ -0.25
HDAC2-211ENST00000521233 NLRP12P59046 1061 aa13.51□□□□□ -0.25
HDAC2-211ENST00000521233 PLPP4Q5VZY2 271 aa13.51□□□□□ -0.25
HDAC2-211ENST00000521233 C9orf57Q5W0N0 161 aa13.51□□□□□ -0.25
HDAC2-211ENST00000521233 ANKRD40Q6AI12 368 aa13.51□□□□□ -0.25
HDAC2-211ENST00000521233 KIAA1841Q6NSI8 718 aa13.51□□□□□ -0.25
HDAC2-211ENST00000521233 TTI2Q6NXR4 508 aa13.51□□□□□ -0.25
HDAC2-211ENST00000521233 SASS6Q6UVJ0 657 aa13.51□□□□□ -0.25
HDAC2-211ENST00000521233 RNF168Q8IYW5 571 aaPredicted RBP13.51□□□□□ -0.25
HDAC2-211ENST00000521233 LRRC52Q8N7C0 313 aa13.51□□□□□ -0.25
HDAC2-211ENST00000521233 MICAL1Q8TDZ2 1067 aa13.51□□□□□ -0.25
HDAC2-211ENST00000521233 HASPINQ8TF76 798 aa13.51□□□□□ -0.25
HDAC2-211ENST00000521233 CCDC127Q96BQ5 260 aa13.51□□□□□ -0.25
HDAC2-211ENST00000521233 CDCA3Q99618 268 aaPredicted RBP13.51□□□□□ -0.25
HDAC2-211ENST00000521233 MTMR12Q9C0I1 747 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms