RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 MYCT1Q8N699 235 aa11.72□□□□□ -0.53
PVT1-209ENST00000520913 PRSS33Q8NF86 280 aa11.72□□□□□ -0.53
PVT1-209ENST00000520913 SLC7A14Q8TBB6 771 aa11.72□□□□□ -0.53
PVT1-209ENST00000520913 MFSD1Q9H3U5 465 aa11.72□□□□□ -0.53
PVT1-209ENST00000520913 KCNK12Q9HB15 430 aa11.72□□□□□ -0.53
PVT1-209ENST00000520913 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.72□□□□□ -0.532e-8■■□□□ 12.1
PVT1-209ENST00000520913 STK17AQ9UEE5 414 aa11.72□□□□□ -0.53
PVT1-209ENST00000520913 NUB1Q9Y5A7 615 aa11.72□□□□□ -0.53
PVT1-209ENST00000520913 BACE2Q9Y5Z0 518 aa11.72□□□□□ -0.53
PVT1-209ENST00000520913 CLIC4Q9Y696 253 aa11.72□□□□□ -0.53
PVT1-209ENST00000520913 I3L4J1 428 aa11.71□□□□□ -0.53
PVT1-209ENST00000520913 OGTO15294 1046 aa11.71□□□□□ -0.53
PVT1-209ENST00000520913 MEFVO15553 781 aaPredicted RBP11.71□□□□□ -0.53
PVT1-209ENST00000520913 ADAM12O43184 909 aa11.71□□□□□ -0.53
PVT1-209ENST00000520913 XPOTO43592 962 aaKnown RBP11.71□□□□□ -0.53
PVT1-209ENST00000520913 TRAK2O60296 914 aa11.71□□□□□ -0.53
PVT1-209ENST00000520913 CLTAP09496 248 aa11.71□□□□□ -0.53
PVT1-209ENST00000520913 MCM4P33991 863 aa11.71□□□□□ -0.53
PVT1-209ENST00000520913 SLC10A6Q3KNW5 377 aa11.71□□□□□ -0.53
PVT1-209ENST00000520913 SEZ6Q53EL9 994 aa11.71□□□□□ -0.53
PVT1-209ENST00000520913 VARS2Q5ST30 1063 aaKnown RBP11.71□□□□□ -0.53
PVT1-209ENST00000520913 AXDND1Q5T1B0 1012 aaPredicted RBP11.71□□□□□ -0.53
PVT1-209ENST00000520913 CD300LGQ6UXG3 332 aa11.71□□□□□ -0.53
PVT1-209ENST00000520913 RTL10Q7L3V2 364 aa11.71□□□□□ -0.53
PVT1-209ENST00000520913 MAP4K3Q8IVH8 894 aa11.71□□□□□ -0.53
PVT1-209ENST00000520913 NXPE3Q969Y0 559 aa11.71□□□□□ -0.53
PVT1-209ENST00000520913 C18orf25Q96B23 403 aaPredicted RBP11.71□□□□□ -0.53
PVT1-209ENST00000520913 MYADMQ96S97 322 aa11.71□□□□□ -0.53
PVT1-209ENST00000520913 HAPLN2Q9GZV7 340 aa11.71□□□□□ -0.53
PVT1-209ENST00000520913 ZHX3Q9H4I2 956 aa11.71□□□□□ -0.53
PVT1-209ENST00000520913 PLEKHA5Q9HAU0 1116 aa11.71□□□□□ -0.53
PVT1-209ENST00000520913 CCDC39Q9UFE4 941 aa11.71□□□□□ -0.53
PVT1-209ENST00000520913 TUBGCP4Q9UGJ1 667 aa11.71□□□□□ -0.53
PVT1-209ENST00000520913 FBXO2Q9UK22 296 aaPredicted RBP11.71□□□□□ -0.53
PVT1-209ENST00000520913 TBX20Q9UMR3 447 aa11.71□□□□□ -0.53
PVT1-209ENST00000520913 SRPRBQ9Y5M8 271 aaKnown RBP11.71□□□□□ -0.53
PVT1-209ENST00000520913 ZFP37Q9Y6Q3 630 aaPredicted RBP11.71□□□□□ -0.53
PVT1-209ENST00000520913 MORC2Q9Y6X9 1032 aaPredicted RBP11.71□□□□□ -0.53
PVT1-209ENST00000520913 OBSL1O75147 1896 aa11.71□□□□□ -0.53
PVT1-209ENST00000520913 DMDP11532 3685 aa11.71□□□□□ -0.54
PVT1-209ENST00000520913 DENND4CQ5VZ89 1909 aa11.7□□□□□ -0.54
PVT1-209ENST00000520913 COL4A2P08572 1712 aa11.7□□□□□ -0.54
PVT1-209ENST00000520913 TTC26A0AVF1 554 aa11.7□□□□□ -0.54
PVT1-209ENST00000520913 H7C4K7 107 aa11.7□□□□□ -0.54
PVT1-209ENST00000520913 CCL16O15467 120 aa11.7□□□□□ -0.54
PVT1-209ENST00000520913 FSHRP23945 695 aa11.7□□□□□ -0.54
PVT1-209ENST00000520913 IGFBP6P24592 240 aaPredicted RBP11.7□□□□□ -0.54
PVT1-209ENST00000520913 MARCKSP29966 332 aaPredicted RBP11.7□□□□□ -0.54
PVT1-209ENST00000520913 AVPR2P30518 371 aa11.7□□□□□ -0.54
PVT1-209ENST00000520913 TNFSF9P41273 254 aa11.7□□□□□ -0.54
PVT1-209ENST00000520913 NUBP1P53384 320 aa11.7□□□□□ -0.54
PVT1-209ENST00000520913 ROR1Q01973 937 aa11.7□□□□□ -0.54
PVT1-209ENST00000520913 UVSSAQ2YD98 709 aa11.7□□□□□ -0.54
PVT1-209ENST00000520913 IER5LQ5T953 404 aa11.7□□□□□ -0.54
PVT1-209ENST00000520913 SLC8B1Q6J4K2 584 aa11.7□□□□□ -0.54
PVT1-209ENST00000520913 ZNF280DQ6N043 979 aa11.7□□□□□ -0.54
PVT1-209ENST00000520913 GRASPQ7Z6J2 395 aaPredicted RBP11.7□□□□□ -0.54
PVT1-209ENST00000520913 KRI1Q8N9T8 703 aaKnown RBP11.7□□□□□ -0.54
PVT1-209ENST00000520913 HVCN1Q96D96 273 aa11.7□□□□□ -0.54
PVT1-209ENST00000520913 KIF12Q96FN5 646 aa11.7□□□□□ -0.54
PVT1-209ENST00000520913 EPSTI1Q96J88 318 aa11.7□□□□□ -0.54
PVT1-209ENST00000520913 SUSD3Q96L08 255 aa11.7□□□□□ -0.54
PVT1-209ENST00000520913 FIZ1Q96SL8 496 aa11.7□□□□□ -0.54
PVT1-209ENST00000520913 ZSCAN16Q9H4T2 348 aaPredicted RBP11.7□□□□□ -0.54
PVT1-209ENST00000520913 UBQLN1Q9UMX0 589 aaKnown RBP11.7□□□□□ -0.54
PVT1-209ENST00000520913 POLIQ9UNA4 740 aa11.7□□□□□ -0.54
PVT1-209ENST00000520913 MTMR6Q9Y217 621 aa11.7□□□□□ -0.54
PVT1-209ENST00000520913 PIEZO1Q92508 2521 aa11.7□□□□□ -0.54
PVT1-209ENST00000520913 TICRRQ7Z2Z1 1910 aa11.7□□□□□ -0.54
PVT1-209ENST00000520913 WDR27A2RRH5 827 aa11.69□□□□□ -0.54
PVT1-209ENST00000520913 STX6O43752 255 aa11.69□□□□□ -0.54
PVT1-209ENST00000520913 FAM189A1O60320 539 aa11.69□□□□□ -0.54
PVT1-209ENST00000520913 LAMP2P13473 410 aa11.69□□□□□ -0.54
PVT1-209ENST00000520913 CYP3A5P20815 502 aa11.69□□□□□ -0.54
PVT1-209ENST00000520913 NMT1P30419 496 aaKnown RBP11.69□□□□□ -0.54
PVT1-209ENST00000520913 LRPAP1P30533 357 aa11.69□□□□□ -0.54
PVT1-209ENST00000520913 DDIT3P35638 169 aa11.69□□□□□ -0.54
PVT1-209ENST00000520913 GTF2BQ00403 316 aa11.69□□□□□ -0.54
PVT1-209ENST00000520913 ENOX2Q16206 610 aaKnown RBP11.69□□□□□ -0.54
PVT1-209ENST00000520913 SPECC1Q5M775 1068 aa11.69□□□□□ -0.54
PVT1-209ENST00000520913 FAM173BQ6P4H8 233 aa11.69□□□□□ -0.54
PVT1-209ENST00000520913 RSPO2Q6UXX9 243 aaPredicted RBP11.69□□□□□ -0.54
PVT1-209ENST00000520913 USP49Q70CQ1 688 aa11.69□□□□□ -0.54
PVT1-209ENST00000520913 APPL2Q8NEU8 664 aa11.69□□□□□ -0.54
PVT1-209ENST00000520913 TSPAN18Q96SJ8 248 aa11.69□□□□□ -0.54
PVT1-209ENST00000520913 MSTO1Q9BUK6 570 aa11.69□□□□□ -0.54
PVT1-209ENST00000520913 ST6GALNAC4Q9H4F1 302 aa11.69□□□□□ -0.54
PVT1-209ENST00000520913 RPF1Q9H9Y2 349 aaKnown RBP11.69□□□□□ -0.54
PVT1-209ENST00000520913 FOXD4L1Q9NU39 408 aa11.69□□□□□ -0.54
PVT1-209ENST00000520913 SEL1LQ9UBV2 794 aa11.69□□□□□ -0.54
PVT1-209ENST00000520913 FBXL21Q9UKT6 434 aa11.69□□□□□ -0.54
PVT1-209ENST00000520913 A0A0B4J269 797 aa11.68□□□□□ -0.54
PVT1-209ENST00000520913 NARSO43776 548 aaKnown RBP11.68□□□□□ -0.54
PVT1-209ENST00000520913 LRG1P02750 347 aa11.68□□□□□ -0.54
PVT1-209ENST00000520913 SRFP11831 508 aa11.68□□□□□ -0.54
PVT1-209ENST00000520913 ELF1P32519 619 aa11.68□□□□□ -0.54
PVT1-209ENST00000520913 NTHL1P78549 312 aa11.68□□□□□ -0.54
PVT1-209ENST00000520913 CEBPZQ03701 1054 aaKnown RBP11.68□□□□□ -0.54
PVT1-209ENST00000520913 SPAG1Q07617 926 aa11.68□□□□□ -0.54
PVT1-209ENST00000520913 TCF15Q12870 199 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms