RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 USP17L20D6RJB6 530 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 USP17L24Q0WX57 530 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 SFSWAPQ12872 951 aaKnown RBP9.14□□□□□ -0.95
CSMD1-206ENST00000520002 KBTBD12Q3ZCT8 623 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 USP17L6PQ6QN14 398 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 NYAP1Q6ZVC0 841 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 NARS2Q96I59 477 aaKnown RBP9.14□□□□□ -0.95
CSMD1-206ENST00000520002 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.14□□□□□ -0.95
CSMD1-206ENST00000520002 C20orf96Q9NUD7 363 aaPredicted RBP9.14□□□□□ -0.95
CSMD1-206ENST00000520002 ADCY10Q96PN6 1610 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 CAV1Q03135 178 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 MTMR1Q13613 665 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 IYDQ6PHW0 289 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 MICU2Q8IYU8 434 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 PPHLN1Q8NEY8 458 aaKnown RBP9.14□□□□□ -0.95
CSMD1-206ENST00000520002 TTC8Q8TAM2 541 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 DDI1Q8WTU0 396 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 DCAF4Q8WV16 495 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 VPS50Q96JG6 964 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 CPVLQ9H3G5 476 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 HSPBP1Q9NZL4 362 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 DDX20Q9UHI6 824 aaKnown RBP9.14□□□□□ -0.95
CSMD1-206ENST00000520002 FAM47DPA6NHR8 397 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 H2AFXP16104 143 aaPredicted RBP9.14□□□□□ -0.95
CSMD1-206ENST00000520002 PSMC6P62333 389 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 SLC20A2Q08357 652 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 KCNH2Q12809 1159 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 CCDC60Q8IWA6 550 aaPredicted RBP9.14□□□□□ -0.95
CSMD1-206ENST00000520002 SLC25A41Q8N5S1 370 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 LRRC39Q96DD0 335 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 PAIP1Q9H074 479 aaKnown RBP9.14□□□□□ -0.95
CSMD1-206ENST00000520002 CYP26B1Q9NR63 512 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 SOX13Q9UN79 622 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 ARHGEF37A1IGU5 675 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 MIF4GDA9UHW6 222 aaKnown RBP9.14□□□□□ -0.95
CSMD1-206ENST00000520002 SLC16A4O15374 487 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 PPARGP37231 505 aaPredicted RBP9.14□□□□□ -0.95
CSMD1-206ENST00000520002 ZC3H15Q8WU90 426 aaKnown RBP9.14□□□□□ -0.95
CSMD1-206ENST00000520002 MCRS1Q96EZ8 462 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 RMDN3Q96TC7 470 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 KLHL4Q9C0H6 718 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.14□□□□□ -0.95
CSMD1-206ENST00000520002 TTC26A0AVF1 554 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 M0QYV0 167 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 KRT76Q01546 638 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 R3HDM1Q15032 1099 aaKnown RBP9.14□□□□□ -0.95
CSMD1-206ENST00000520002 IMPG1Q17R60 797 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 FAM83BQ5T0W9 1011 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 IZUMO3Q5VZ72 239 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 KDM7AQ6ZMT4 941 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 MRPS26Q9BYN8 205 aaKnown RBP9.14□□□□□ -0.95
CSMD1-206ENST00000520002 KLHL31Q9H511 634 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 MAGI3Q5TCQ9 1506 aa9.14□□□□□ -0.95
CSMD1-206ENST00000520002 CFAP99D6REC4 459 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 GPC5P78333 572 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 RNF19BQ6ZMZ0 732 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 RAD54LQ92698 747 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 MTERF3Q96E29 417 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 METTL5Q9NRN9 209 aaKnown RBP9.13□□□□□ -0.95
CSMD1-206ENST00000520002 LIMA1Q9UHB6 759 aaKnown RBP9.13□□□□□ -0.95
CSMD1-206ENST00000520002 POLIQ9UNA4 740 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 DIS3Q9Y2L1 958 aaKnown RBP9.13□□□□□ -0.95
CSMD1-206ENST00000520002 SEMA3DO95025 777 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 RNF25Q96BH1 459 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-206ENST00000520002 PYGLP06737 847 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 AKR1B1P15121 316 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 USP6P35125 1406 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 P3H1Q32P28 736 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 RNF219Q5W0B1 726 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-206ENST00000520002 XXYLT1Q8NBI6 393 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 MMTAG2Q9BU76 263 aaKnown RBP9.13□□□□□ -0.95
CSMD1-206ENST00000520002 RANBP17Q9H2T7 1088 aaKnown RBP9.13□□□□□ -0.95
CSMD1-206ENST00000520002 DKK3Q9UBP4 350 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 PYGMP11217 842 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 ROR1Q01973 937 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 ITIH4Q14624 930 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 LBRQ14739 615 aaKnown RBP9.13□□□□□ -0.95
CSMD1-206ENST00000520002 TBCCQ15814 346 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 PREPLQ4J6C6 727 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-206ENST00000520002 C11orf74Q86VG3 221 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 DDIASQ8IXT1 998 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 DIS3LQ8TF46 1054 aaKnown RBP9.13□□□□□ -0.95
CSMD1-206ENST00000520002 WDR60Q8WVS4 1066 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 TFR2Q9UP52 801 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 AATKQ6ZMQ8 1374 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 FOXN1O15353 648 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 PEX5P50542 639 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 DSTYKQ6XUX3 929 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 SCG3Q8WXD2 468 aaKnown RBP9.13□□□□□ -0.95
CSMD1-206ENST00000520002 KLHL11Q9NVR0 708 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 SUPT20HL1Q3ZLR7 823 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 KIAA1755Q5JYT7 1200 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 FAM196AQ6ZSG2 479 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 TTC30AQ86WT1 665 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 CLEC4FQ8N1N0 589 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 NLGN1Q8N2Q7 840 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 UBASH3BQ8TF42 649 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 AFG1LQ8WV93 481 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 ZBTB5O15062 677 aa9.13□□□□□ -0.95
CSMD1-206ENST00000520002 RAD51CO43502 376 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms