RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 DDX19BQ9UMR2 479 aa8.12□□□□□ -1.11
CLK4-202ENST00000519132 STXBP5LQ9Y2K9 1186 aa8.12□□□□□ -1.11
CLK4-202ENST00000519132 TMEM82A0PJX8 343 aa8.11□□□□□ -1.11
CLK4-202ENST00000519132 PRAMEF22A3QJZ6 481 aa8.11□□□□□ -1.11
CLK4-202ENST00000519132 PCDH8O95206 1070 aa8.11□□□□□ -1.11
CLK4-202ENST00000519132 EIF2S2P20042 333 aaKnown RBP8.11□□□□□ -1.11
CLK4-202ENST00000519132 ARHGAP44Q17R89 818 aa8.11□□□□□ -1.11
CLK4-202ENST00000519132 GJC2Q5T442 439 aaPredicted RBP8.11□□□□□ -1.11
CLK4-202ENST00000519132 IFFO2Q5TF58 517 aa8.11□□□□□ -1.11
CLK4-202ENST00000519132 RRAGBQ5VZM2 374 aa8.11□□□□□ -1.11
CLK4-202ENST00000519132 SMG8Q8ND04 991 aaKnown RBP8.11□□□□□ -1.11
CLK4-202ENST00000519132 TMEM52Q8NDY8 209 aa8.11□□□□□ -1.11
CLK4-202ENST00000519132 VRK1Q99986 396 aaPredicted RBP8.11□□□□□ -1.11
CLK4-202ENST00000519132 SUFUQ9UMX1 484 aa8.11□□□□□ -1.11
CLK4-202ENST00000519132 KIF3AQ9Y496 699 aa8.11□□□□□ -1.11
CLK4-202ENST00000519132 RGPD3A6NKT7 1758 aaPredicted RBP8.11□□□□□ -1.11
CLK4-202ENST00000519132 RGPD4Q7Z3J3 1758 aa8.11□□□□□ -1.11
CLK4-202ENST00000519132 ATP10DQ9P241 1426 aa8.11□□□□□ -1.11
CLK4-202ENST00000519132 FGF10O15520 208 aaPredicted RBP8.11□□□□□ -1.11
CLK4-202ENST00000519132 GLULP15104 373 aa8.11□□□□□ -1.11
CLK4-202ENST00000519132 KCNA2P16389 499 aa8.11□□□□□ -1.11
CLK4-202ENST00000519132 TACR1P25103 407 aa8.11□□□□□ -1.11
CLK4-202ENST00000519132 DSC2Q02487 901 aa8.11□□□□□ -1.11
CLK4-202ENST00000519132 GPR19Q15760 415 aa8.11□□□□□ -1.11
CLK4-202ENST00000519132 RCSD1Q6JBY9 416 aa8.11□□□□□ -1.11
CLK4-202ENST00000519132 G2E3Q7L622 706 aa8.11□□□□□ -1.11
CLK4-202ENST00000519132 IQCF2Q8IXL9 164 aa8.11□□□□□ -1.11
CLK4-202ENST00000519132 RRP36Q96EU6 259 aaKnown RBP8.11□□□□□ -1.11
CLK4-202ENST00000519132 SLC35A4Q96G79 324 aa8.11□□□□□ -1.11
CLK4-202ENST00000519132 PPM1MQ96MI6 270 aa8.11□□□□□ -1.11
CLK4-202ENST00000519132 PTCHD1Q96NR3 888 aa8.11□□□□□ -1.11
CLK4-202ENST00000519132 LZTS2Q9BRK4 669 aa8.11□□□□□ -1.11
CLK4-202ENST00000519132 IFT122Q9HBG6 1241 aa8.11□□□□□ -1.11
CLK4-202ENST00000519132 C1GALT1Q9NS00 363 aa8.11□□□□□ -1.11
CLK4-202ENST00000519132 TNNQ9UQP3 1299 aa8.11□□□□□ -1.11
CLK4-202ENST00000519132 TIMM13Q9Y5L4 95 aaPredicted RBP8.11□□□□□ -1.11
CLK4-202ENST00000519132 USP16Q9Y5T5 823 aa8.11□□□□□ -1.11
CLK4-202ENST00000519132 SYNGAP1Q96PV0 1343 aa8.1□□□□□ -1.11
CLK4-202ENST00000519132 SYNDIG1LA6NDD5 238 aa8.1□□□□□ -1.11
CLK4-202ENST00000519132 FGF18O76093 207 aa8.1□□□□□ -1.11
CLK4-202ENST00000519132 ZNF865P0CJ78 1059 aaPredicted RBP8.1□□□□□ -1.11
CLK4-202ENST00000519132 BMP8BP34820 402 aa8.1□□□□□ -1.11
CLK4-202ENST00000519132 LIFRP42702 1097 aa8.1□□□□□ -1.11
CLK4-202ENST00000519132 MYBPC3Q14896 1274 aa8.1□□□□□ -1.11
CLK4-202ENST00000519132 GMCL1Q96IK5 515 aa8.1□□□□□ -1.11
CLK4-202ENST00000519132 RIC8AQ9NPQ8 531 aa8.1□□□□□ -1.11
CLK4-202ENST00000519132 RIC8BQ9NVN3 520 aa8.1□□□□□ -1.11
CLK4-202ENST00000519132 DSEQ9UL01 958 aa8.1□□□□□ -1.11
CLK4-202ENST00000519132 SLC27A2O14975 620 aa8.1□□□□□ -1.11
CLK4-202ENST00000519132 ARHGAP6O43182 974 aa8.1□□□□□ -1.11
CLK4-202ENST00000519132 TRPC1P48995 793 aa8.1□□□□□ -1.11
CLK4-202ENST00000519132 CCDC15Q0P6D6 951 aa8.1□□□□□ -1.11
CLK4-202ENST00000519132 ARHGAP15Q53QZ3 475 aa8.1□□□□□ -1.11
CLK4-202ENST00000519132 SYTL1Q8IYJ3 562 aa8.1□□□□□ -1.11
CLK4-202ENST00000519132 TMEM57Q8N5G2 664 aa8.1□□□□□ -1.11
CLK4-202ENST00000519132 APIPQ96GX9 242 aa8.1□□□□□ -1.11
CLK4-202ENST00000519132 ACAP3Q96P50 834 aa8.1□□□□□ -1.11
CLK4-202ENST00000519132 PALLDQ8WX93 1383 aa8.1□□□□□ -1.11
CLK4-202ENST00000519132 H0YHG0 523 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 CCP110O43303 1012 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 MGEA5O60502 916 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 HSD3B1P14060 373 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 CCT4P50991 539 aaKnown RBP8.09□□□□□ -1.11
CLK4-202ENST00000519132 SARNPP82979 210 aaKnown RBP8.09□□□□□ -1.11
CLK4-202ENST00000519132 KRT27Q7Z3Y8 459 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 ZSCAN30Q86W11 494 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 ANKRD13BQ86YJ7 626 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 IL31RAQ8NI17 732 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 ARL8AQ96BM9 186 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 SYTL4Q96C24 671 aaPredicted RBP8.09□□□□□ -1.11
CLK4-202ENST00000519132 CHCHD6Q9BRQ6 235 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 DUSP15Q9H1R2 295 aaPredicted RBP8.09□□□□□ -1.11
CLK4-202ENST00000519132 RGS17Q9UGC6 210 aaPredicted RBP8.09□□□□□ -1.11
CLK4-202ENST00000519132 PCDHA6Q9UN73 950 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 SIT1Q9Y3P8 196 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 PCDHA3Q9Y5H8 950 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 ANKRD36CQ5JPF3 1778 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 PRAMEF25A6NGN4 478 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 C22orf46C9J442 243 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 APOL1O14791 398 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 CD40P25942 277 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 NOP2P46087 812 aaKnown RBP8.09□□□□□ -1.11
CLK4-202ENST00000519132 ADAM9Q13443 819 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 BLMHQ13867 455 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 GRIK4Q16099 956 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 DGKKQ5KSL6 1271 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.09□□□□□ -1.11
CLK4-202ENST00000519132 OR1N1Q8NGS0 311 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 CCDC47Q96A33 483 aaKnown RBP8.09□□□□□ -1.11
CLK4-202ENST00000519132 AGAP3Q96P47 875 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 AFDNP55196 1824 aaKnown RBP8.09□□□□□ -1.11
CLK4-202ENST00000519132 STARD3NLO95772 234 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 NDST3O95803 873 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 FUCA1P04066 466 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 TNNT1P13805 278 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 PTPN1P18031 435 aaKnown RBP8.09□□□□□ -1.11
CLK4-202ENST00000519132 MAGEA8P43361 318 aa8.09□□□□□ -1.11
CLK4-202ENST00000519132 TNNT3P45378 269 aaPredicted RBP8.09□□□□□ -1.11
CLK4-202ENST00000519132 POLD3Q15054 466 aaPredicted RBP8.09□□□□□ -1.11
CLK4-202ENST00000519132 SMAD1Q15797 465 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms