RNA–Protein interactions for RNA: ENST00000518936.5

PCM1-210, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-210ENST00000518936 DPP3Q9NY33 737 aa23.04■■□□□ 1.28
PCM1-210ENST00000518936 LRRIQ3A6PVS8 624 aaPredicted RBP23.03■■□□□ 1.28
PCM1-210ENST00000518936 NFICP08651 508 aa23.03■■□□□ 1.28
PCM1-210ENST00000518936 BIRC3Q13489 604 aa23.03■■□□□ 1.28
PCM1-210ENST00000518936 NCAPHQ15003 741 aa23.03■■□□□ 1.28
PCM1-210ENST00000518936 LRIT3Q3SXY7 679 aa23.03■■□□□ 1.28
PCM1-210ENST00000518936 GLRA4Q5JXX5 417 aa23.03■■□□□ 1.28
PCM1-210ENST00000518936 LRRC52Q8N7C0 313 aa23.03■■□□□ 1.28
PCM1-210ENST00000518936 ZSWIM2Q8NEG5 633 aa23.03■■□□□ 1.28
PCM1-210ENST00000518936 TAF4BQ92750 862 aa23.03■■□□□ 1.28
PCM1-210ENST00000518936 ZNF558Q96NG5 402 aa23.03■■□□□ 1.28
PCM1-210ENST00000518936 PLVAPQ9BX97 442 aa23.03■■□□□ 1.28
PCM1-210ENST00000518936 FAN1Q9Y2M0 1017 aa23.03■■□□□ 1.28
PCM1-210ENST00000518936 TMEM189-UBE2V1I3L0A0 370 aa23.02■■□□□ 1.28
PCM1-210ENST00000518936 ZC3H11AO75152 810 aaKnown RBP eCLIP23.02■■□□□ 1.28
PCM1-210ENST00000518936 ZNF18P17022 549 aa23.02■■□□□ 1.28
PCM1-210ENST00000518936 ATICP31939 592 aa23.02■■□□□ 1.28
PCM1-210ENST00000518936 ELAVL2Q12926 359 aaKnown RBP23.02■■□□□ 1.28
PCM1-210ENST00000518936 BMS1Q14692 1282 aaKnown RBP23.02■■□□□ 1.28
PCM1-210ENST00000518936 FKBP15Q5T1M5 1219 aa23.02■■□□□ 1.28
PCM1-210ENST00000518936 CLP1Q92989 425 aaKnown RBP23.02■■□□□ 1.28
PCM1-210ENST00000518936 SLC35C1Q96A29 364 aa23.02■■□□□ 1.28
PCM1-210ENST00000518936 ZMAT2Q96NC0 199 aaKnown RBP23.02■■□□□ 1.28
PCM1-210ENST00000518936 MTMR12Q9C0I1 747 aa23.02■■□□□ 1.28
PCM1-210ENST00000518936 GTPBP10A4D1E9 387 aaKnown RBP23.01■■□□□ 1.27
PCM1-210ENST00000518936 RB1P06400 928 aa23.01■■□□□ 1.27
PCM1-210ENST00000518936 P4HA1P13674 534 aa23.01■■□□□ 1.27
PCM1-210ENST00000518936 OR1G1P47890 313 aa23.01■■□□□ 1.27
PCM1-210ENST00000518936 KCNH2Q12809 1159 aa23.01■■□□□ 1.27
PCM1-210ENST00000518936 ZACNQ401N2 412 aa23.01■■□□□ 1.27
PCM1-210ENST00000518936 SV2CQ496J9 727 aa23.01■■□□□ 1.27
PCM1-210ENST00000518936 DCLRE1AQ6PJP8 1040 aa23.01■■□□□ 1.27
PCM1-210ENST00000518936 TRAPPC11Q7Z392 1133 aa23.01■■□□□ 1.27
PCM1-210ENST00000518936 LUZP1Q86V48 1076 aa23.01■■□□□ 1.27
PCM1-210ENST00000518936 EFCAB13Q8IY85 973 aa23.01■■□□□ 1.27
PCM1-210ENST00000518936 COLGALT2Q8IYK4 626 aa23.01■■□□□ 1.27
PCM1-210ENST00000518936 FAXDC2Q96IV6 333 aa23.01■■□□□ 1.27
PCM1-210ENST00000518936 FAM81BQ96LP2 452 aa23.01■■□□□ 1.27
PCM1-210ENST00000518936 LIMA1Q9UHB6 759 aaKnown RBP23.01■■□□□ 1.27
PCM1-210ENST00000518936 LRRC10BA6NIK2 292 aa23■■□□□ 1.27
PCM1-210ENST00000518936 PES1O00541 588 aaKnown RBP23■■□□□ 1.27
PCM1-210ENST00000518936 SERPINC1P01008 464 aa23■■□□□ 1.27
PCM1-210ENST00000518936 KRT19P08727 400 aa23■■□□□ 1.27
PCM1-210ENST00000518936 BCAR1P56945 870 aa23■■□□□ 1.27
PCM1-210ENST00000518936 KRT17Q04695 432 aa23■■□□□ 1.27
PCM1-210ENST00000518936 VWA3BQ502W6 1294 aa23■■□□□ 1.27
PCM1-210ENST00000518936 IRF2BP1Q8IU81 584 aa23■■□□□ 1.27
PCM1-210ENST00000518936 FBXL13Q8NEE6 735 aa23■■□□□ 1.27
PCM1-210ENST00000518936 DNAI2Q9GZS0 605 aa23■■□□□ 1.27
PCM1-210ENST00000518936 NRDE2Q9H7Z3 1164 aa23■■□□□ 1.27
PCM1-210ENST00000518936 SLC28A3Q9HAS3 691 aa23■■□□□ 1.27
PCM1-210ENST00000518936 MIOSQ9NXC5 875 aa23■■□□□ 1.27
PCM1-210ENST00000518936 NUB1Q9Y5A7 615 aa23■■□□□ 1.27
PCM1-210ENST00000518936 TMEM265A0A087WTH1 108 aa22.99■■□□□ 1.27
PCM1-210ENST00000518936 PODXLO00592 558 aa22.99■■□□□ 1.27
PCM1-210ENST00000518936 STAU1O95793 577 aaKnown RBP22.99■■□□□ 1.27
PCM1-210ENST00000518936 FMO5P49326 533 aa22.99■■□□□ 1.27
PCM1-210ENST00000518936 TAF6P49848 677 aa22.99■■□□□ 1.27
PCM1-210ENST00000518936 MYL7Q01449 175 aa22.99■■□□□ 1.27
PCM1-210ENST00000518936 NAB2Q15742 525 aa22.99■■□□□ 1.27
PCM1-210ENST00000518936 UPP1Q16831 310 aa22.99■■□□□ 1.27
PCM1-210ENST00000518936 SGSM1Q2NKQ1 1148 aa22.99■■□□□ 1.27
PCM1-210ENST00000518936 WDR44Q5JSH3 913 aa22.99■■□□□ 1.27
PCM1-210ENST00000518936 C9orf57Q5W0N0 161 aa22.99■■□□□ 1.27
PCM1-210ENST00000518936 KCNT2Q6UVM3 1135 aa22.99■■□□□ 1.27
PCM1-210ENST00000518936 SV2AQ7L0J3 742 aa22.99■■□□□ 1.27
PCM1-210ENST00000518936 TMEM169Q96HH4 297 aa22.99■■□□□ 1.27
PCM1-210ENST00000518936 TGS1Q96RS0 853 aaKnown RBP22.99■■□□□ 1.27
PCM1-210ENST00000518936 NDST4Q9H3R1 872 aa22.99■■□□□ 1.27
PCM1-210ENST00000518936 CWH43Q9H720 699 aa22.99■■□□□ 1.27
PCM1-210ENST00000518936 SPG21Q9NZD8 308 aa22.99■■□□□ 1.27
PCM1-210ENST00000518936 PUF60Q9UHX1 559 aaKnown RBP22.99■■□□□ 1.27
PCM1-210ENST00000518936 MRPL42Q9Y6G3 142 aaKnown RBP22.99■■□□□ 1.27
PCM1-210ENST00000518936 CBFA2T2O43439 604 aa22.98■■□□□ 1.27
PCM1-210ENST00000518936 TADA2AO75478 443 aa22.98■■□□□ 1.27
PCM1-210ENST00000518936 B3GAT3O94766 335 aa22.98■■□□□ 1.27
PCM1-210ENST00000518936 C4BPAP04003 597 aaKnown RBP22.98■■□□□ 1.27
PCM1-210ENST00000518936 ITGB3P05106 788 aa22.98■■□□□ 1.27
PCM1-210ENST00000518936 TRIM49P0CI25 452 aa22.98■■□□□ 1.27
PCM1-210ENST00000518936 TRIM49CP0CI26 452 aa22.98■■□□□ 1.27
PCM1-210ENST00000518936 PIK3CAP42336 1068 aa22.98■■□□□ 1.27
PCM1-210ENST00000518936 GCLMP48507 274 aa22.98■■□□□ 1.27
PCM1-210ENST00000518936 GATMP50440 423 aa22.98■■□□□ 1.27
PCM1-210ENST00000518936 NCOA4Q13772 614 aa22.98■■□□□ 1.27
PCM1-210ENST00000518936 KRT31Q15323 416 aa22.98■■□□□ 1.27
PCM1-210ENST00000518936 SMYD5Q6GMV2 418 aa22.98■■□□□ 1.27
PCM1-210ENST00000518936 TMCO2Q7Z6W1 182 aaPredicted RBP22.98■■□□□ 1.27
PCM1-210ENST00000518936 C1orf127Q8N9H9 656 aa22.98■■□□□ 1.27
PCM1-210ENST00000518936 C18orf25Q96B23 403 aaPredicted RBP22.98■■□□□ 1.27
PCM1-210ENST00000518936 FAM124BQ9H5Z6 455 aaPredicted RBP22.98■■□□□ 1.27
PCM1-210ENST00000518936 TUBGCP4Q9UGJ1 667 aa22.98■■□□□ 1.27
PCM1-210ENST00000518936 PLAGL2Q9UPG8 496 aa22.98■■□□□ 1.27
PCM1-210ENST00000518936 SF3B1O75533 1304 aaKnown RBP eCLIP22.98■■□□□ 1.27
PCM1-210ENST00000518936 ANO9A1A5B4 782 aa22.97■■□□□ 1.27
PCM1-210ENST00000518936 CASTOR2A6NHX0 329 aa22.97■■□□□ 1.27
PCM1-210ENST00000518936 NRP1O14786 923 aa22.97■■□□□ 1.27
PCM1-210ENST00000518936 MEFVO15553 781 aaPredicted RBP22.97■■□□□ 1.27
PCM1-210ENST00000518936 DDHD2O94830 711 aa22.97■■□□□ 1.27
PCM1-210ENST00000518936 CLSTN1O94985 981 aa22.97■■□□□ 1.27
PCM1-210ENST00000518936 GALTP07902 379 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms