RNA–Protein interactions for RNA: ENST00000518910.5

CTNNA1-211, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-211ENST00000518910 GSDMAQ96QA5 445 aa13.29□□□□□ -0.28
CTNNA1-211ENST00000518910 MTMR12Q9C0I1 747 aa13.29□□□□□ -0.28
CTNNA1-211ENST00000518910 KCTD10Q9H3F6 313 aa13.29□□□□□ -0.28
CTNNA1-211ENST00000518910 ADAM28Q9UKQ2 775 aa13.29□□□□□ -0.28
CTNNA1-211ENST00000518910 STXBP5LQ9Y2K9 1186 aa13.29□□□□□ -0.28
CTNNA1-211ENST00000518910 NUB1Q9Y5A7 615 aa13.29□□□□□ -0.28
CTNNA1-211ENST00000518910 PTPRJQ12913 1337 aa13.29□□□□□ -0.28
CTNNA1-211ENST00000518910 C2orf16Q68DN1 1984 aa13.29□□□□□ -0.28
CTNNA1-211ENST00000518910 ZNF233A6NK53 670 aa13.28□□□□□ -0.28
CTNNA1-211ENST00000518910 INPPL1O15357 1258 aa13.28□□□□□ -0.28
CTNNA1-211ENST00000518910 CALUO43852 315 aaPredicted RBP13.28□□□□□ -0.28
CTNNA1-211ENST00000518910 URODP06132 367 aa13.28□□□□□ -0.28
CTNNA1-211ENST00000518910 TMEM191BP0C7N4 346 aa13.28□□□□□ -0.28
CTNNA1-211ENST00000518910 KCNE1P15382 129 aa13.28□□□□□ -0.28
CTNNA1-211ENST00000518910 ARPP19P56211 112 aa13.28□□□□□ -0.28
CTNNA1-211ENST00000518910 BMT2Q1RMZ1 405 aa13.28□□□□□ -0.28
CTNNA1-211ENST00000518910 TIGD5Q53EQ6 642 aa13.28□□□□□ -0.28
CTNNA1-211ENST00000518910 CLEC17AQ6ZS10 378 aa13.28□□□□□ -0.28
CTNNA1-211ENST00000518910 CREBRFQ8IUR6 639 aa13.28□□□□□ -0.28
CTNNA1-211ENST00000518910 BEST2Q8NFU1 509 aa13.28□□□□□ -0.28
CTNNA1-211ENST00000518910 OR5B17Q8NGF7 314 aa13.28□□□□□ -0.28
CTNNA1-211ENST00000518910 RIN2Q8WYP3 895 aaPredicted RBP13.28□□□□□ -0.28
CTNNA1-211ENST00000518910 NSUN3Q9H649 340 aaKnown RBP13.28□□□□□ -0.28
CTNNA1-211ENST00000518910 TLE6Q9H808 572 aa13.28□□□□□ -0.28
CTNNA1-211ENST00000518910 SLC38A7Q9NVC3 462 aa13.28□□□□□ -0.28
CTNNA1-211ENST00000518910 CLDND1Q9NY35 253 aa13.28□□□□□ -0.28
CTNNA1-211ENST00000518910 UBQLN1Q9UMX0 589 aaKnown RBP13.28□□□□□ -0.28
CTNNA1-211ENST00000518910 TIMM13Q9Y5L4 95 aaPredicted RBP13.28□□□□□ -0.28
CTNNA1-211ENST00000518910 SPDYE4A6NLX3 237 aa13.27□□□□□ -0.29
CTNNA1-211ENST00000518910 LDHAP00338 332 aaKnown RBP13.27□□□□□ -0.29
CTNNA1-211ENST00000518910 ITGB3P05106 788 aa13.27□□□□□ -0.29
CTNNA1-211ENST00000518910 SPATA31D3P0C874 917 aa13.27□□□□□ -0.29
CTNNA1-211ENST00000518910 TNNI1P19237 187 aa13.27□□□□□ -0.29
CTNNA1-211ENST00000518910 BMP6P22004 513 aa13.27□□□□□ -0.29
CTNNA1-211ENST00000518910 NR2F2P24468 414 aa13.27□□□□□ -0.29
CTNNA1-211ENST00000518910 TKTP29401 623 aaKnown RBP13.27□□□□□ -0.29
CTNNA1-211ENST00000518910 POLR2BP30876 1174 aaKnown RBP13.27□□□□□ -0.29
CTNNA1-211ENST00000518910 GLUD2P49448 558 aa13.27□□□□□ -0.29
CTNNA1-211ENST00000518910 PLCB3Q01970 1234 aa13.27□□□□□ -0.29
CTNNA1-211ENST00000518910 CYP24A1Q07973 514 aa13.27□□□□□ -0.29
CTNNA1-211ENST00000518910 HYAL1Q12794 435 aa13.27□□□□□ -0.29
CTNNA1-211ENST00000518910 BFSP1Q12934 665 aa13.27□□□□□ -0.29
CTNNA1-211ENST00000518910 SMC1AQ14683 1233 aaKnown RBP13.27□□□□□ -0.29
CTNNA1-211ENST00000518910 KYAT1Q16773 422 aa13.27□□□□□ -0.29
CTNNA1-211ENST00000518910 UPP1Q16831 310 aa13.27□□□□□ -0.29
CTNNA1-211ENST00000518910 DSTYKQ6XUX3 929 aa13.27□□□□□ -0.29
CTNNA1-211ENST00000518910 SPATA31D4Q6ZUB0 917 aa13.27□□□□□ -0.29
CTNNA1-211ENST00000518910 DDX53Q86TM3 631 aaKnown RBP13.27□□□□□ -0.29
CTNNA1-211ENST00000518910 GUF1Q8N442 669 aaKnown RBP13.27□□□□□ -0.29
CTNNA1-211ENST00000518910 NELFBQ8WX92 580 aa13.27□□□□□ -0.29
CTNNA1-211ENST00000518910 KCNN1Q92952 543 aa13.27□□□□□ -0.29
CTNNA1-211ENST00000518910 FNBP1Q96RU3 617 aa13.27□□□□□ -0.29
CTNNA1-211ENST00000518910 TSG101Q99816 390 aa13.27□□□□□ -0.29
CTNNA1-211ENST00000518910 ZBP1Q9H171 429 aa13.27□□□□□ -0.29
CTNNA1-211ENST00000518910 PLEKHA5Q9HAU0 1116 aa13.27□□□□□ -0.29
CTNNA1-211ENST00000518910 DPP3Q9NY33 737 aa13.27□□□□□ -0.29
CTNNA1-211ENST00000518910 SF3B1O75533 1304 aaKnown RBP eCLIP13.27□□□□□ -0.294e-6■■■■■ 92.3
CTNNA1-211ENST00000518910 H3BQ06 376 aaPredicted RBP13.26□□□□□ -0.29
CTNNA1-211ENST00000518910 IL18RAPO95256 599 aa13.26□□□□□ -0.29
CTNNA1-211ENST00000518910 TRIM49P0CI25 452 aa13.26□□□□□ -0.29
CTNNA1-211ENST00000518910 TRIM49CP0CI26 452 aa13.26□□□□□ -0.29
CTNNA1-211ENST00000518910 DLG4P78352 724 aa13.26□□□□□ -0.29
CTNNA1-211ENST00000518910 TFF2Q03403 129 aa13.26□□□□□ -0.29
CTNNA1-211ENST00000518910 STIM1Q13586 685 aa13.26□□□□□ -0.29
CTNNA1-211ENST00000518910 MORC3Q14149 939 aa13.26□□□□□ -0.29
CTNNA1-211ENST00000518910 XKR4Q5GH76 650 aa13.26□□□□□ -0.29
CTNNA1-211ENST00000518910 RTP2Q5QGT7 225 aa13.26□□□□□ -0.29
CTNNA1-211ENST00000518910 ANKRD40Q6AI12 368 aa13.26□□□□□ -0.29
CTNNA1-211ENST00000518910 PALB2Q86YC2 1186 aa13.26□□□□□ -0.29
CTNNA1-211ENST00000518910 CSGALNACT2Q8N6G5 542 aa13.26□□□□□ -0.29
CTNNA1-211ENST00000518910 PLEKHO2Q8TD55 490 aa13.26□□□□□ -0.29
CTNNA1-211ENST00000518910 HERC2P3Q9BVR0 1158 aa13.26□□□□□ -0.29
CTNNA1-211ENST00000518910 LMAN2LQ9H0V9 348 aa13.26□□□□□ -0.29
CTNNA1-211ENST00000518910 MRPL17Q9NRX2 175 aaKnown RBP13.26□□□□□ -0.29
CTNNA1-211ENST00000518910 KIAA1468Q9P260 1216 aa13.26□□□□□ -0.29
CTNNA1-211ENST00000518910 AGAP1Q9UPQ3 857 aa13.26□□□□□ -0.29
CTNNA1-211ENST00000518910 FRMD4BQ9Y2L6 1034 aa13.26□□□□□ -0.29
CTNNA1-211ENST00000518910 PDXKO00764 312 aa13.25□□□□□ -0.29
CTNNA1-211ENST00000518910 PSMA7O14818 248 aa13.25□□□□□ -0.29
CTNNA1-211ENST00000518910 FSCN2O14926 492 aa13.25□□□□□ -0.29
CTNNA1-211ENST00000518910 XPOTO43592 962 aaKnown RBP13.25□□□□□ -0.29
CTNNA1-211ENST00000518910 PHACTR2O75167 634 aa13.25□□□□□ -0.29
CTNNA1-211ENST00000518910 KIF20AO95235 890 aa13.25□□□□□ -0.29
CTNNA1-211ENST00000518910 TNNC2P02585 160 aa13.25□□□□□ -0.29
CTNNA1-211ENST00000518910 SOD2P04179 222 aa13.25□□□□□ -0.29
CTNNA1-211ENST00000518910 KCNA5P22460 613 aa13.25□□□□□ -0.29
CTNNA1-211ENST00000518910 NDUFV1P49821 464 aa13.25□□□□□ -0.29
CTNNA1-211ENST00000518910 UBE3AQ05086 875 aa13.25□□□□□ -0.29
CTNNA1-211ENST00000518910 ADAM9Q13443 819 aa13.25□□□□□ -0.29
CTNNA1-211ENST00000518910 BIRC3Q13489 604 aa13.25□□□□□ -0.29
CTNNA1-211ENST00000518910 PTPN14Q15678 1187 aa13.25□□□□□ -0.29
CTNNA1-211ENST00000518910 HSP90AA4PQ58FG1 418 aa13.25□□□□□ -0.29
CTNNA1-211ENST00000518910 SPATA1Q5VX52 437 aa13.25□□□□□ -0.29
CTNNA1-211ENST00000518910 C9orf57Q5W0N0 161 aa13.25□□□□□ -0.29
CTNNA1-211ENST00000518910 CAVIN1Q6NZI2 390 aaKnown RBP13.25□□□□□ -0.29
CTNNA1-211ENST00000518910 DCLRE1AQ6PJP8 1040 aa13.25□□□□□ -0.29
CTNNA1-211ENST00000518910 CD300LGQ6UXG3 332 aa13.25□□□□□ -0.29
CTNNA1-211ENST00000518910 FAM186BQ8IYM0 893 aa13.25□□□□□ -0.29
CTNNA1-211ENST00000518910 ADSSL1Q8N142 457 aa13.25□□□□□ -0.29
CTNNA1-211ENST00000518910 GOLGA5Q8TBA6 731 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms