RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 CRHR2Q13324 411 aa4.72□□□□□ -1.65
VPS13B-207ENST00000518569 RRP1BQ14684 758 aaKnown RBP4.72□□□□□ -1.65
VPS13B-207ENST00000518569 CDSNQ15517 529 aa4.72□□□□□ -1.65
VPS13B-207ENST00000518569 ARHGAP29Q52LW3 1261 aa4.72□□□□□ -1.65
VPS13B-207ENST00000518569 SLC4A10Q6U841 1118 aa4.72□□□□□ -1.65
VPS13B-207ENST00000518569 HEATR3Q7Z4Q2 680 aa4.72□□□□□ -1.65
VPS13B-207ENST00000518569 TMPRSS6Q8IU80 811 aa4.72□□□□□ -1.65
VPS13B-207ENST00000518569 CAMKK1Q8N5S9 505 aa4.72□□□□□ -1.65
VPS13B-207ENST00000518569 OR10H5Q8NGA6 315 aa4.72□□□□□ -1.65
VPS13B-207ENST00000518569 KLHDC4Q8TBB5 520 aa4.72□□□□□ -1.65
VPS13B-207ENST00000518569 CCDC136Q96JN2 1154 aa4.72□□□□□ -1.65
VPS13B-207ENST00000518569 MYOCQ99972 504 aa4.72□□□□□ -1.65
VPS13B-207ENST00000518569 TMEM60Q9H2L4 133 aa4.72□□□□□ -1.65
VPS13B-207ENST00000518569 LMBRD1Q9NUN5 540 aa4.72□□□□□ -1.65
VPS13B-207ENST00000518569 PNPOQ9NVS9 261 aa4.72□□□□□ -1.65
VPS13B-207ENST00000518569 OBP2AQ9NY56 170 aa4.72□□□□□ -1.65
VPS13B-207ENST00000518569 RUVBL1Q9Y265 456 aaKnown RBP4.72□□□□□ -1.65
VPS13B-207ENST00000518569 PCDHA3Q9Y5H8 950 aa4.72□□□□□ -1.65
VPS13B-207ENST00000518569 LRRC14BA6NHZ5 514 aa4.71□□□□□ -1.66
VPS13B-207ENST00000518569 VSTM5A8MXK1 200 aa4.71□□□□□ -1.66
VPS13B-207ENST00000518569 F2RL2O00254 374 aa4.71□□□□□ -1.66
VPS13B-207ENST00000518569 TRIM24O15164 1050 aa4.71□□□□□ -1.66
VPS13B-207ENST00000518569 B3GALT2O43825 422 aa4.71□□□□□ -1.66
VPS13B-207ENST00000518569 SLC43A1O75387 559 aa4.71□□□□□ -1.66
VPS13B-207ENST00000518569 HAUS5O94927 633 aa4.71□□□□□ -1.66
VPS13B-207ENST00000518569 CD1AP06126 327 aa4.71□□□□□ -1.66
VPS13B-207ENST00000518569 HTR1BP28222 390 aa4.71□□□□□ -1.66
VPS13B-207ENST00000518569 PRDX5P30044 214 aa4.71□□□□□ -1.66
VPS13B-207ENST00000518569 AGFG1P52594 562 aaKnown RBP4.71□□□□□ -1.66
VPS13B-207ENST00000518569 FLYWCH1Q4VC44 716 aa4.71□□□□□ -1.66
VPS13B-207ENST00000518569 METRNLQ641Q3 311 aa4.71□□□□□ -1.66
VPS13B-207ENST00000518569 CHST15Q7LFX5 561 aaPredicted RBP4.71□□□□□ -1.66
VPS13B-207ENST00000518569 OVCH2Q7RTZ1 564 aa4.71□□□□□ -1.66
VPS13B-207ENST00000518569 SRGAP1Q7Z6B7 1085 aa4.71□□□□□ -1.66
VPS13B-207ENST00000518569 DGKHQ86XP1 1220 aa4.71□□□□□ -1.66
VPS13B-207ENST00000518569 FAM90A1Q86YD7 464 aa4.71□□□□□ -1.66
VPS13B-207ENST00000518569 FITM2Q8N6M3 262 aa4.71□□□□□ -1.66
VPS13B-207ENST00000518569 ZBTB34Q8NCN2 500 aa4.71□□□□□ -1.66
VPS13B-207ENST00000518569 REXO4Q9GZR2 422 aaKnown RBP4.71□□□□□ -1.66
VPS13B-207ENST00000518569 RLIMQ9NVW2 624 aa4.71□□□□□ -1.66
VPS13B-207ENST00000518569 FBXO34Q9NWN3 711 aa4.71□□□□□ -1.66
VPS13B-207ENST00000518569 JKAMPQ9P055 326 aa4.71□□□□□ -1.66
VPS13B-207ENST00000518569 FEZ2Q9UHY8 353 aaPredicted RBP4.71□□□□□ -1.66
VPS13B-207ENST00000518569 NR2E3Q9Y5X4 410 aa4.71□□□□□ -1.66
VPS13B-207ENST00000518569 TCRBV7S2A1N4TA0A589 114 aa4.7□□□□□ -1.66
VPS13B-207ENST00000518569 GRXCR1A8MXD5 290 aa4.7□□□□□ -1.66
VPS13B-207ENST00000518569 FAM227AF5H4B4 570 aa4.7□□□□□ -1.66
VPS13B-207ENST00000518569 KIAA0391O15091 583 aaKnown RBP4.7□□□□□ -1.66
VPS13B-207ENST00000518569 RECQL4O94761 1208 aa4.7□□□□□ -1.66
VPS13B-207ENST00000518569 ANXA1P04083 346 aa4.7□□□□□ -1.66
VPS13B-207ENST00000518569 HRGP04196 525 aa4.7□□□□□ -1.66
VPS13B-207ENST00000518569 SBK3P0C264 359 aa4.7□□□□□ -1.66
VPS13B-207ENST00000518569 GCSHP23434 173 aa4.7□□□□□ -1.66
VPS13B-207ENST00000518569 GPSM2P81274 684 aa4.7□□□□□ -1.66
VPS13B-207ENST00000518569 ANO6Q4KMQ2 910 aa4.7□□□□□ -1.66
VPS13B-207ENST00000518569 CCDC157Q569K6 752 aa4.7□□□□□ -1.66
VPS13B-207ENST00000518569 UBE3BQ7Z3V4 1068 aa4.7□□□□□ -1.66
VPS13B-207ENST00000518569 DAAM2Q86T65 1068 aa4.7□□□□□ -1.66
VPS13B-207ENST00000518569 PDSS2Q86YH6 399 aa4.7□□□□□ -1.66
VPS13B-207ENST00000518569 SYT12Q8IV01 421 aa4.7□□□□□ -1.66
VPS13B-207ENST00000518569 RHOT2Q8IXI1 618 aa4.7□□□□□ -1.66
VPS13B-207ENST00000518569 KIAA0319LQ8IZA0 1049 aa4.7□□□□□ -1.66
VPS13B-207ENST00000518569 FAM43AQ8N2R8 423 aa4.7□□□□□ -1.66
VPS13B-207ENST00000518569 AOPEPQ8N6M6 819 aa4.7□□□□□ -1.66
VPS13B-207ENST00000518569 RNF169Q8NCN4 708 aa4.7□□□□□ -1.66
VPS13B-207ENST00000518569 PPP1R35Q8TAP8 253 aa4.7□□□□□ -1.66
VPS13B-207ENST00000518569 MTFMTQ96DP5 389 aaKnown RBP4.7□□□□□ -1.66
VPS13B-207ENST00000518569 LRFN3Q9BTN0 628 aa4.7□□□□□ -1.66
VPS13B-207ENST00000518569 PACSIN1Q9BY11 444 aa4.7□□□□□ -1.66
VPS13B-207ENST00000518569 GSTO2Q9H4Y5 243 aa4.7□□□□□ -1.66
VPS13B-207ENST00000518569 FAM204AQ9H8W3 233 aa4.7□□□□□ -1.66
VPS13B-207ENST00000518569 ABCF2Q9UG63 623 aa4.7□□□□□ -1.66
VPS13B-207ENST00000518569 ZDHHC8Q9ULC8 765 aa4.7□□□□□ -1.66
VPS13B-207ENST00000518569 H3BUI4 141 aa4.69□□□□□ -1.66
VPS13B-207ENST00000518569 PLSCR1O15162 318 aa4.69□□□□□ -1.66
VPS13B-207ENST00000518569 PEX11BO96011 259 aa4.69□□□□□ -1.66
VPS13B-207ENST00000518569 GNAI3P08754 354 aa4.69□□□□□ -1.66
VPS13B-207ENST00000518569 CKBP12277 381 aa4.69□□□□□ -1.66
VPS13B-207ENST00000518569 SLC6A4P31645 630 aa4.69□□□□□ -1.66
VPS13B-207ENST00000518569 PIK3CGP48736 1102 aa4.69□□□□□ -1.66
VPS13B-207ENST00000518569 CHN2P52757 468 aa4.69□□□□□ -1.66
VPS13B-207ENST00000518569 GNAI1P63096 354 aa4.69□□□□□ -1.66
VPS13B-207ENST00000518569 NHLH2Q02577 135 aa4.69□□□□□ -1.66
VPS13B-207ENST00000518569 TOB2Q14106 344 aaPredicted RBP4.69□□□□□ -1.66
VPS13B-207ENST00000518569 FGL2Q14314 439 aa4.69□□□□□ -1.66
VPS13B-207ENST00000518569 RABL3Q5HYI8 236 aa4.69□□□□□ -1.66
VPS13B-207ENST00000518569 FAM102AQ5T9C2 384 aaPredicted RBP4.69□□□□□ -1.66
VPS13B-207ENST00000518569 EMC10Q5UCC4 262 aa4.69□□□□□ -1.66
VPS13B-207ENST00000518569 AGAP9Q5VTM2 703 aa4.69□□□□□ -1.66
VPS13B-207ENST00000518569 NPNTQ6UXI9 565 aa4.69□□□□□ -1.66
VPS13B-207ENST00000518569 ZNF365Q70YC5 407 aa4.69□□□□□ -1.66
VPS13B-207ENST00000518569 MED25Q71SY5 747 aa4.69□□□□□ -1.66
VPS13B-207ENST00000518569 C1orf210Q8IVY1 113 aa4.69□□□□□ -1.66
VPS13B-207ENST00000518569 ZFPM1Q8IX07 1006 aa4.69□□□□□ -1.66
VPS13B-207ENST00000518569 PALM2Q8IXS6 379 aa4.69□□□□□ -1.66
VPS13B-207ENST00000518569 NUP133Q8WUM0 1156 aa4.69□□□□□ -1.66
VPS13B-207ENST00000518569 PGBD4Q96DM1 585 aa4.69□□□□□ -1.66
VPS13B-207ENST00000518569 SLC35A4Q96G79 324 aa4.69□□□□□ -1.66
VPS13B-207ENST00000518569 MRPL46Q9H2W6 279 aaKnown RBP4.69□□□□□ -1.66
VPS13B-207ENST00000518569 PARPBPQ9NWS1 579 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms