RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 DSG1Q02413 1049 aa23.87■■□□□ 1.41
VEGFA-217ENST00000518538 TMEM132DQ14C87 1099 aa23.87■■□□□ 1.41
VEGFA-217ENST00000518538 USP41Q3LFD5 358 aa23.87■■□□□ 1.41
VEGFA-217ENST00000518538 C12orf56Q8IXR9 622 aa23.87■■□□□ 1.41
VEGFA-217ENST00000518538 C3orf58Q8NDZ4 430 aa23.87■■□□□ 1.41
VEGFA-217ENST00000518538 SPATA20Q8TB22 786 aa23.87■■□□□ 1.41
VEGFA-217ENST00000518538 UBE2ZQ9H832 354 aaPredicted RBP23.87■■□□□ 1.41
VEGFA-217ENST00000518538 KIAA1586Q9HCI6 787 aa23.87■■□□□ 1.41
VEGFA-217ENST00000518538 MYO7AQ13402 2215 aa23.87■■□□□ 1.41
VEGFA-217ENST00000518538 CLIC2O15247 247 aa23.86■■□□□ 1.41
VEGFA-217ENST00000518538 LILRB3O75022 631 aa23.86■■□□□ 1.41
VEGFA-217ENST00000518538 SPATA1Q5VX52 437 aa23.86■■□□□ 1.41
VEGFA-217ENST00000518538 KIAA1841Q6NSI8 718 aa23.86■■□□□ 1.41
VEGFA-217ENST00000518538 CD300LGQ6UXG3 332 aa23.86■■□□□ 1.41
VEGFA-217ENST00000518538 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.86■■□□□ 1.417e-15■■■□□ 17.8
VEGFA-217ENST00000518538 GPR65Q8IYL9 337 aa23.86■■□□□ 1.41
VEGFA-217ENST00000518538 BEST2Q8NFU1 509 aa23.86■■□□□ 1.41
VEGFA-217ENST00000518538 NOC3LQ8WTT2 800 aaKnown RBP23.86■■□□□ 1.41
VEGFA-217ENST00000518538 SMARCE1Q969G3 411 aa23.86■■□□□ 1.41
VEGFA-217ENST00000518538 FBXL18Q96ME1 805 aa23.86■■□□□ 1.41
VEGFA-217ENST00000518538 KCTD10Q9H3F6 313 aa23.86■■□□□ 1.41
VEGFA-217ENST00000518538 CLDND1Q9NY35 253 aa23.86■■□□□ 1.41
VEGFA-217ENST00000518538 PCDHA5Q9Y5H7 936 aa23.86■■□□□ 1.41
VEGFA-217ENST00000518538 IGFBP6P24592 240 aaPredicted RBP23.85■■□□□ 1.41
VEGFA-217ENST00000518538 ADAM15Q13444 863 aa23.85■■□□□ 1.41
VEGFA-217ENST00000518538 KIAA0319Q5VV43 1072 aa23.85■■□□□ 1.41
VEGFA-217ENST00000518538 NT5DC4Q86YG4 428 aa23.85■■□□□ 1.41
VEGFA-217ENST00000518538 ATXN2LQ8WWM7 1075 aaKnown RBP23.85■■□□□ 1.41
VEGFA-217ENST00000518538 REV3LO60673 3130 aa23.84■■□□□ 1.41
VEGFA-217ENST00000518538 ANK1P16157 1881 aa23.84■■□□□ 1.41
VEGFA-217ENST00000518538 ZNF233A6NK53 670 aa23.84■■□□□ 1.41
VEGFA-217ENST00000518538 PDXKO00764 312 aa23.84■■□□□ 1.41
VEGFA-217ENST00000518538 C2CD2LO14523 706 aa23.84■■□□□ 1.41
VEGFA-217ENST00000518538 LINC01565O15544 149 aa23.84■■□□□ 1.41
VEGFA-217ENST00000518538 TRAPPC3O43617 180 aa23.84■■□□□ 1.41
VEGFA-217ENST00000518538 CYP2J2P51589 502 aa23.84■■□□□ 1.41
VEGFA-217ENST00000518538 WNT7BP56706 349 aa23.84■■□□□ 1.41
VEGFA-217ENST00000518538 FAM171A1Q5VUB5 890 aa23.84■■□□□ 1.41
VEGFA-217ENST00000518538 EP400NLQ6ZTU2 488 aa23.84■■□□□ 1.41
VEGFA-217ENST00000518538 CBWD2Q8IUF1 395 aa23.84■■□□□ 1.41
VEGFA-217ENST00000518538 EFCAB13Q8IY85 973 aa23.84■■□□□ 1.41
VEGFA-217ENST00000518538 GUF1Q8N442 669 aaKnown RBP23.84■■□□□ 1.41
VEGFA-217ENST00000518538 XXYLT1Q8NBI6 393 aa23.84■■□□□ 1.41
VEGFA-217ENST00000518538 ERCC4Q92889 916 aaPredicted RBP23.84■■□□□ 1.41
VEGFA-217ENST00000518538 B3GALT6Q96L58 329 aa23.84■■□□□ 1.41
VEGFA-217ENST00000518538 GBP4Q96PP9 640 aa23.84■■□□□ 1.41
VEGFA-217ENST00000518538 EMILIN2Q9BXX0 1053 aa23.84■■□□□ 1.41
VEGFA-217ENST00000518538 CLASP2O75122 1294 aaKnown RBP23.83■■□□□ 1.41
VEGFA-217ENST00000518538 GUCY2FP51841 1108 aa23.83■■□□□ 1.41
VEGFA-217ENST00000518538 KCNC3Q14003 757 aa23.83■■□□□ 1.41
VEGFA-217ENST00000518538 AAK1Q2M2I8 961 aa23.83■■□□□ 1.41
VEGFA-217ENST00000518538 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.83■■□□□ 1.41
VEGFA-217ENST00000518538 TMEM130Q8N3G9 435 aa23.83■■□□□ 1.41
VEGFA-217ENST00000518538 TMEM174Q8WUU8 243 aa23.83■■□□□ 1.41
VEGFA-217ENST00000518538 TTPALQ9BTX7 342 aa23.83■■□□□ 1.41
VEGFA-217ENST00000518538 GTPBP4Q9BZE4 634 aaKnown RBP23.83■■□□□ 1.41
VEGFA-217ENST00000518538 MAPK8IP1Q9UQF2 711 aa23.83■■□□□ 1.41
VEGFA-217ENST00000518538 NUB1Q9Y5A7 615 aa23.83■■□□□ 1.41
VEGFA-217ENST00000518538 TBX10O75333 385 aa23.82■■□□□ 1.4
VEGFA-217ENST00000518538 GLP2RO95838 553 aa23.82■■□□□ 1.4
VEGFA-217ENST00000518538 CNPP09543 421 aaKnown RBP23.82■■□□□ 1.4
VEGFA-217ENST00000518538 KCNA5P22460 613 aa23.82■■□□□ 1.4
VEGFA-217ENST00000518538 FGFR3P22607 806 aa23.82■■□□□ 1.4
VEGFA-217ENST00000518538 LTBRP36941 435 aa23.82■■□□□ 1.4
VEGFA-217ENST00000518538 BRCC3P46736 316 aa23.82■■□□□ 1.4
VEGFA-217ENST00000518538 NDUFV1P49821 464 aa23.82■■□□□ 1.4
VEGFA-217ENST00000518538 TFF2Q03403 129 aa23.82■■□□□ 1.4
VEGFA-217ENST00000518538 SNRNP35Q16560 246 aaKnown RBP23.82■■□□□ 1.4
VEGFA-217ENST00000518538 RTP2Q5QGT7 225 aa23.82■■□□□ 1.4
VEGFA-217ENST00000518538 ZNF658Q5TYW1 1059 aaPredicted RBP23.82■■□□□ 1.4
VEGFA-217ENST00000518538 CEP57Q86XR8 500 aa23.82■■□□□ 1.4
VEGFA-217ENST00000518538 SLC9A9Q8IVB4 645 aa23.82■■□□□ 1.4
VEGFA-217ENST00000518538 VN1R2Q8NFZ6 395 aa23.82■■□□□ 1.4
VEGFA-217ENST00000518538 RIN2Q8WYP3 895 aaPredicted RBP23.82■■□□□ 1.4
VEGFA-217ENST00000518538 KLHL5Q96PQ7 755 aa23.82■■□□□ 1.4
VEGFA-217ENST00000518538 RXFP1Q9HBX9 757 aa23.82■■□□□ 1.4
VEGFA-217ENST00000518538 PDE11AQ9HCR9 933 aa23.82■■□□□ 1.4
VEGFA-217ENST00000518538 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.82■■□□□ 1.4
VEGFA-217ENST00000518538 PRUNE2Q8WUY3 3088 aa23.81■■□□□ 1.4
VEGFA-217ENST00000518538 CALUO43852 315 aaPredicted RBP23.81■■□□□ 1.4
VEGFA-217ENST00000518538 SRGAP2BP0DMP2 458 aa23.81■■□□□ 1.4
VEGFA-217ENST00000518538 MCM4P33991 863 aa23.81■■□□□ 1.4
VEGFA-217ENST00000518538 MRPS5P82675 430 aaKnown RBP23.81■■□□□ 1.4
VEGFA-217ENST00000518538 CREMQ03060 361 aa23.81■■□□□ 1.4
VEGFA-217ENST00000518538 SURF1Q15526 300 aa23.81■■□□□ 1.4
VEGFA-217ENST00000518538 COBLL1Q53SF7 1204 aa23.81■■□□□ 1.4
VEGFA-217ENST00000518538 C9orf57Q5W0N0 161 aa23.81■■□□□ 1.4
VEGFA-217ENST00000518538 PDXDC1Q6P996 788 aa23.81■■□□□ 1.4
VEGFA-217ENST00000518538 TMEM184AQ6ZMB5 413 aa23.81■■□□□ 1.4
VEGFA-217ENST00000518538 PPFIBP1Q86W92 1011 aa23.81■■□□□ 1.4
VEGFA-217ENST00000518538 PIK3R5Q8WYR1 880 aa23.81■■□□□ 1.4
VEGFA-217ENST00000518538 DMAC2Q9NW81 257 aa23.81■■□□□ 1.4
VEGFA-217ENST00000518538 DPP3Q9NY33 737 aa23.81■■□□□ 1.4
VEGFA-217ENST00000518538 TRAF3IP3Q9Y228 551 aa23.81■■□□□ 1.4
VEGFA-217ENST00000518538 HCFC2Q9Y5Z7 792 aa23.81■■□□□ 1.4
VEGFA-217ENST00000518538 ANO9A1A5B4 782 aa23.8■■□□□ 1.4
VEGFA-217ENST00000518538 I3L4J1 428 aa23.8■■□□□ 1.4
VEGFA-217ENST00000518538 TULP1O00294 542 aaPredicted RBP23.8■■□□□ 1.4
VEGFA-217ENST00000518538 EXOC3O60645 756 aa23.8■■□□□ 1.4
VEGFA-217ENST00000518538 ADH1AP07327 375 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms