RNA–Protein interactions for RNA: ENST00000517400.5

LINC00534-201, long intergenic non-protein coding RNA 534, humanhuman

TSL 2 BASIC

Gene LINC00534, Length 793 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-201ENST00000517400 UHRF1Q96T88 793 aaPredicted RBP5.56□□□□□ -1.52
LINC00534-201ENST00000517400 PDCD2LQ9BRP1 358 aa5.56□□□□□ -1.52
LINC00534-201ENST00000517400 KRTAP4-7Q9BYR0 210 aa5.56□□□□□ -1.52
LINC00534-201ENST00000517400 IL23AQ9NPF7 189 aa5.56□□□□□ -1.52
LINC00534-201ENST00000517400 LANCL2Q9NS86 450 aa5.56□□□□□ -1.52
LINC00534-201ENST00000517400 TDP1Q9NUW8 608 aa5.56□□□□□ -1.52
LINC00534-201ENST00000517400 USP40Q9NVE5 1235 aa5.56□□□□□ -1.52
LINC00534-201ENST00000517400 STK26Q9P289 416 aa5.56□□□□□ -1.52
LINC00534-201ENST00000517400 GABBR1Q9UBS5 961 aa5.56□□□□□ -1.52
LINC00534-201ENST00000517400 OAZ3Q9UMX2 235 aa5.56□□□□□ -1.52
LINC00534-201ENST00000517400 RPRD2Q5VT52 1461 aaKnown RBP5.56□□□□□ -1.52
LINC00534-201ENST00000517400 MST1RQ04912 1400 aa5.56□□□□□ -1.52
LINC00534-201ENST00000517400 METP08581 1390 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 SASH1O94885 1247 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 ALDH2P05091 517 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 ZSCAN22P10073 491 aaPredicted RBP5.55□□□□□ -1.52
LINC00534-201ENST00000517400 IL2RBP14784 551 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 CR2P20023 1033 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 CASRP41180 1078 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 IL12RB1P42701 662 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 NPEPPSP55786 919 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 RIN1Q13671 783 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 GRM3Q14832 879 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 KRTAP19-4Q3LI73 84 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 CHST15Q7LFX5 561 aaPredicted RBP5.55□□□□□ -1.52
LINC00534-201ENST00000517400 DENND1CQ8IV53 801 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 TRMT2AQ8IZ69 625 aaKnown RBP5.55□□□□□ -1.52
LINC00534-201ENST00000517400 CAMKK1Q8N5S9 505 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 ZBTB34Q8NCN2 500 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 SHCBP1Q8NEM2 672 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 OR5M3Q8NGP4 307 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 CCHCR1Q8TD31 782 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 CASKIN2Q8WXE0 1202 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 CLPTM1LQ96KA5 538 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 MRGPRX4Q96LA9 322 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 KCNC2Q96PR1 638 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 LMF1Q96S06 567 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 CDC5LQ99459 802 aaKnown RBP5.55□□□□□ -1.52
LINC00534-201ENST00000517400 C12orf65Q9H3J6 166 aaKnown RBP5.55□□□□□ -1.52
LINC00534-201ENST00000517400 NELFAQ9H3P2 528 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 KMT5AQ9NQR1 393 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 TMEM140Q9NV12 185 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 CALCOCO1Q9P1Z2 691 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 DDX20Q9UHI6 824 aaKnown RBP5.55□□□□□ -1.52
LINC00534-201ENST00000517400 POLHQ9Y253 713 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 CDK12Q9NYV4 1490 aaPredicted RBP5.55□□□□□ -1.52
LINC00534-201ENST00000517400 ADGRL3Q9HAR2 1447 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 NCOA3Q9Y6Q9 1424 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 TMEM131LA2VDJ0 1609 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 DIP2AQ14689 1571 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 PIK3R4Q99570 1358 aa5.55□□□□□ -1.52
LINC00534-201ENST00000517400 FRMPD2Q68DX3 1309 aaPredicted RBP5.54□□□□□ -1.52
LINC00534-201ENST00000517400 MYBBP1AQ9BQG0 1328 aaKnown RBP5.54□□□□□ -1.52
LINC00534-201ENST00000517400 ADCY6O43306 1168 aa5.54□□□□□ -1.52
LINC00534-201ENST00000517400 TUSC2O75896 110 aa5.54□□□□□ -1.52
LINC00534-201ENST00000517400 UBXN7O94888 489 aa5.54□□□□□ -1.52
LINC00534-201ENST00000517400 AMY1AP04745 511 aa5.54□□□□□ -1.52
LINC00534-201ENST00000517400 GZMKP49863 264 aa5.54□□□□□ -1.52
LINC00534-201ENST00000517400 ATP8B2P98198 1209 aa5.54□□□□□ -1.52
LINC00534-201ENST00000517400 TARDBPQ13148 414 aaKnown RBP eCLIP5.54□□□□□ -1.526e-7■■■■□ 20.3
LINC00534-201ENST00000517400 SP140Q13342 867 aa5.54□□□□□ -1.52
LINC00534-201ENST00000517400 MRPL49Q13405 166 aaKnown RBP5.54□□□□□ -1.52
LINC00534-201ENST00000517400 RAB39AQ14964 217 aa5.54□□□□□ -1.52
LINC00534-201ENST00000517400 PRAMEF14Q5SWL7 426 aa5.54□□□□□ -1.52
LINC00534-201ENST00000517400 LCE4AQ5TA78 99 aa5.54□□□□□ -1.52
LINC00534-201ENST00000517400 SLFN13Q68D06 897 aa5.54□□□□□ -1.52
LINC00534-201ENST00000517400 OVCH2Q7RTZ1 564 aa5.54□□□□□ -1.52
LINC00534-201ENST00000517400 ZNF572Q7Z3I7 529 aaPredicted RBP5.54□□□□□ -1.52
LINC00534-201ENST00000517400 DEFB132Q7Z7B7 95 aa5.54□□□□□ -1.52
LINC00534-201ENST00000517400 GPR135Q8IZ08 494 aa5.54□□□□□ -1.52
LINC00534-201ENST00000517400 FAM43AQ8N2R8 423 aa5.54□□□□□ -1.52
LINC00534-201ENST00000517400 C3orf20Q8ND61 904 aa5.54□□□□□ -1.52
LINC00534-201ENST00000517400 REPS2Q8NFH8 660 aa5.54□□□□□ -1.52
LINC00534-201ENST00000517400 BORCS6Q96GS4 357 aa5.54□□□□□ -1.52
LINC00534-201ENST00000517400 DPYSL5Q9BPU6 564 aa5.54□□□□□ -1.52
LINC00534-201ENST00000517400 SENP6Q9GZR1 1112 aaPredicted RBP5.54□□□□□ -1.52
LINC00534-201ENST00000517400 TMEM60Q9H2L4 133 aa5.54□□□□□ -1.52
LINC00534-201ENST00000517400 AGO3Q9H9G7 860 aaKnown RBP5.54□□□□□ -1.52
LINC00534-201ENST00000517400 MAN1C1Q9NR34 630 aa5.54□□□□□ -1.52
LINC00534-201ENST00000517400 DUSP10Q9Y6W6 482 aa5.54□□□□□ -1.52
LINC00534-201ENST00000517400 SETD5Q9C0A6 1442 aa5.54□□□□□ -1.52
LINC00534-201ENST00000517400 SETBP1Q9Y6X0 1596 aa5.54□□□□□ -1.52
LINC00534-201ENST00000517400 ATRNL1Q5VV63 1379 aa5.54□□□□□ -1.52
LINC00534-201ENST00000517400 C1orf167Q5SNV9 1468 aa5.53□□□□□ -1.52
LINC00534-201ENST00000517400 CCDC194A0A1B0GVG4 234 aa5.53□□□□□ -1.52
LINC00534-201ENST00000517400 UBE2QL1A1L167 161 aa5.53□□□□□ -1.52
LINC00534-201ENST00000517400 LAMTOR5O43504 91 aa5.53□□□□□ -1.52
LINC00534-201ENST00000517400 B3GALT2O43825 422 aa5.53□□□□□ -1.52
LINC00534-201ENST00000517400 CDC14BO60729 498 aa5.53□□□□□ -1.52
LINC00534-201ENST00000517400 GPR32O75388 356 aa5.53□□□□□ -1.52
LINC00534-201ENST00000517400 ARIH2O95376 493 aa5.53□□□□□ -1.52
LINC00534-201ENST00000517400 FTLP02792 175 aaPredicted RBP5.53□□□□□ -1.52
LINC00534-201ENST00000517400 HRGP04196 525 aa5.53□□□□□ -1.52
LINC00534-201ENST00000517400 KRT18P05783 430 aaKnown RBP5.53□□□□□ -1.52
LINC00534-201ENST00000517400 BMP7P18075 431 aa5.53□□□□□ -1.52
LINC00534-201ENST00000517400 DDCP20711 480 aa5.53□□□□□ -1.52
LINC00534-201ENST00000517400 PTPN7P35236 360 aa5.53□□□□□ -1.52
LINC00534-201ENST00000517400 RPS19P39019 145 aaKnown RBP5.53□□□□□ -1.52
LINC00534-201ENST00000517400 MAP2K6P52564 334 aa5.53□□□□□ -1.52
LINC00534-201ENST00000517400 HK3P52790 923 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms