RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 TMX3Q96JJ7 454 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 KCNC2Q96PR1 638 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 FAM83CQ9BQN1 747 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 G6PC3Q9BUM1 346 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 SSBP4Q9BWG4 385 aaPredicted RBP2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 OSBPL6Q9BZF3 934 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 DPH1Q9BZG8 443 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 AP5M1Q9H0R1 490 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 MANSC1Q9H8J5 431 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 MKNK2Q9HBH9 465 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 TMEM8AQ9HCN3 771 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 ATP13A1Q9HD20 1204 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 ZFP64Q9NPA5 681 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 NSMCE4AQ9NXX6 385 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 IMPACTQ9P2X3 320 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 EBF1Q9UH73 591 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 PALD1Q9ULE6 856 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 PLAGL2Q9UPG8 496 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 SIT1Q9Y3P8 196 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 LMTK3Q96Q04 1460 aa2.94□□□□□ -1.94
SCARNA3-201ENST00000517097 A0A0A6YYK5 440 aaPredicted RBP2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 PGPEP1LA6NFU8 196 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 CLCA1A8K7I4 914 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 NT5C1B-RDH14C9J2C7 533 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 BTN3A1O00481 513 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 ASNA1O43681 348 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 AHCYL1O43865 530 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 CUTAO60888 179 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 ZBED4O75132 1171 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 USP2O75604 605 aaPredicted RBP2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 AHSGP02765 367 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 CEACAM5P06731 702 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 FTH1P19P0C7X4 201 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 ZSCAN22P10073 491 aaPredicted RBP2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 RARBP10826 455 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 GLULP15104 373 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 APEX1P27695 318 aaKnown RBP2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 CST5P28325 142 aaPredicted RBP2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 GABRB3P28472 473 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 PRDX5P30044 214 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 KIR2DL1P43626 348 aaPredicted RBP2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 KIR2DL2P43627 348 aaPredicted RBP2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 CARSP49589 748 aaKnown RBP2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 PAPOLAP51003 745 aaKnown RBP2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 SOX8P57073 446 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 SESN2P58004 480 aaPredicted RBP2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 RTP1P59025 263 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 PFKPQ01813 784 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 CACNB2Q08289 660 aaPredicted RBP2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 CUL4BQ13620 913 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 KRT32Q14532 448 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 KIR3DS1Q14943 382 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 TAF11Q15544 211 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 MAN2A1Q16706 1144 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 ARHGAP15Q53QZ3 475 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 FAM26FQ5R3K3 315 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 KLHL17Q6TDP4 642 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 TMCO3Q6UWJ1 677 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 ABHD15Q6UXT9 468 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 CEP128Q6ZU80 1094 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 Q6ZVL8 140 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 RNF44Q7L0R7 432 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 GET4Q7L5D6 327 aaPredicted RBP2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 ENOSF1Q7L5Y1 443 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 MICU3Q86XE3 530 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 FAM129CQ86XR2 697 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 TCP11L2Q8N4U5 519 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 ZGPATQ8N5A5 531 aaKnown RBP2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 NETO2Q8NC67 525 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 TDRD7Q8NHU6 1098 aaKnown RBP2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 CCHCR1Q8TD31 782 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 AFG1LQ8WV93 481 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 LINC01599Q8WXQ3 324 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 TP53INP1Q96A56 240 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 LRRC46Q96FV0 321 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 DBNDD2Q9BQY9 259 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 SOX7Q9BT81 388 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 KATNAL1Q9BW62 490 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 C1orf43Q9BWL3 253 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 AGXT2Q9BYV1 514 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 PAIP1Q9H074 479 aaKnown RBP2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 CHST8Q9H2A9 424 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 MRPL46Q9H2W6 279 aaKnown RBP2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 MLXIPQ9HAP2 919 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 PREBQ9HCU5 417 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 SLC39A2Q9NP94 309 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 SAYSD1Q9NPB0 183 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 NECTIN3Q9NQS3 549 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 INCENPQ9NQS7 918 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 KCND1Q9NSA2 647 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 RGL1Q9NZL6 768 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 ORC3Q9UBD5 711 aaPredicted RBP2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 HERC5Q9UII4 1024 aaKnown RBP2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 ACSL6Q9UKU0 697 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 RPTORQ8N122 1335 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 MYBBP1AQ9BQG0 1328 aaKnown RBP2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 PITPNM2Q9BZ72 1349 aa2.93□□□□□ -1.94
SCARNA3-201ENST00000517097 CCDC196A0A1B0GTZ2 297 aa2.92□□□□□ -1.94
SCARNA3-201ENST00000517097 A0A1W2PQJ5 194 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms