RNA–Protein interactions for RNA: ENST00000515494.5

CDK18-222, Transcript of cyclin dependent kinase 18, human

TSL 1 (best)

Gene CDK18, Length 3,756 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-222	ENST00000515494	VTA1	Q9NP79	307 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	TMEM88B	A6NKF7	163 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	HLA-DRA	P01903	254 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	VTN	P04004	478 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	PEX19	P40855	299 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	RFC5	P40937	340 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	MORC4	Q8TE76	937 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	TAF4B	Q92750	862 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	SUCLA2	Q9P2R7	463 aa	Predicted RBP	11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	NOCT	Q9UK39	431 aa	Known RBP	11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	L1RE1	Q9UN81	338 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	FAM169A	Q9Y6X4	670 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	ESYT3	A0FGR9	886 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	SLC15A5	A6NIM6	579 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494		H0YCG3	227 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	CLDN3	O15551	220 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	B4GALT5	O43286	388 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	CAND2	O75155	1236 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	RFX1	P22670	979 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	CLNS1A	P54105	237 aa	Known RBP	11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	LAMC2	Q13753	1193 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	OLFML2B	Q68BL8	750 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	CPNE8	Q86YQ8	564 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	ZNF513	Q8N8E2	541 aa	Predicted RBP	11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	RFFL	Q8WZ73	363 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	RPGRIP1	Q96KN7	1286 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	AP1M1	Q9BXS5	423 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	ABHD16B	Q9H3Z7	469 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	TRPM7	Q96QT4	1865 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	UMODL1	Q5DID0	1318 aa		11.27	□□□□□ -0.6
CDK18-222	ENST00000515494		A0A0B4J269	797 aa		11.27	□□□□□ -0.6
CDK18-222	ENST00000515494	BTNL10	A8MVZ5	291 aa		11.27	□□□□□ -0.6
CDK18-222	ENST00000515494	INO80B-WBP1	J3KQ70	363 aa		11.27	□□□□□ -0.6
CDK18-222	ENST00000515494	RPS6KA5	O75582	802 aa		11.27	□□□□□ -0.6
CDK18-222	ENST00000515494	CYP11B1	P15538	503 aa		11.27	□□□□□ -0.6
CDK18-222	ENST00000515494	PIK3CA	P42336	1068 aa		11.27	□□□□□ -0.6
CDK18-222	ENST00000515494	KLHL7	Q8IXQ5	586 aa		11.27	□□□□□ -0.6
CDK18-222	ENST00000515494	KIRREL3	Q8IZU9	778 aa		11.27	□□□□□ -0.6
CDK18-222	ENST00000515494	BTBD6	Q96KE9	485 aa		11.27	□□□□□ -0.6
CDK18-222	ENST00000515494	INO80B	Q9C086	356 aa	Predicted RBP	11.27	□□□□□ -0.6
CDK18-222	ENST00000515494	FAM49A	Q9H0Q0	323 aa	Predicted RBP	11.27	□□□□□ -0.6
CDK18-222	ENST00000515494	ERAP1	Q9NZ08	941 aa		11.27	□□□□□ -0.6
CDK18-222	ENST00000515494	CTTNBP2NL	Q9P2B4	639 aa		11.27	□□□□□ -0.6
CDK18-222	ENST00000515494	GABRQ	Q9UN88	632 aa		11.27	□□□□□ -0.6
CDK18-222	ENST00000515494		H3BRB1	525 aa		11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	MSC	O60682	206 aa		11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	VNN1	O95497	513 aa		11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	TMEM253	P0C7T8	217 aa		11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	ANXA13	P27216	316 aa		11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	GCK	P35557	465 aa		11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	PSMC4	P43686	418 aa		11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	CAP1	Q01518	475 aa		11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	FMO1	Q01740	532 aa		11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	NAA25	Q14CX7	972 aa		11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	ADAT2	Q7Z6V5	191 aa	Known RBP	11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	USP37	Q86T82	979 aa		11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	ABRA	Q8N0Z2	381 aa		11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	SMC1B	Q8NDV3	1235 aa		11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	FAXDC2	Q96IV6	333 aa		11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	CABS1	Q96KC9	395 aa		11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	SCLT1	Q96NL6	688 aa		11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	KRT12	Q99456	494 aa		11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	TUT1	Q9H6E5	874 aa	Known RBP	11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	MINDY3	Q9H8M7	445 aa		11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	SETD4	Q9NVD3	440 aa		11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	TSKS	Q9UJT2	592 aa		11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	AKT3	Q9Y243	479 aa		11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	LGR5	O75473	907 aa		11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	SKAP2	O75563	359 aa	Predicted RBP	11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	IRX1	P78414	480 aa	Predicted RBP	11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	TRIM32	Q13049	653 aa		11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	PSMD6	Q15008	389 aa		11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	ZACN	Q401N2	412 aa		11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	NT5DC3	Q86UY8	548 aa		11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	THNSL1	Q8IYQ7	743 aa		11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	STYXL1	Q9Y6J8	313 aa		11.27	□□□□□ -0.61
CDK18-222	ENST00000515494	ANKRD62	A6NC57	917 aa		11.26	□□□□□ -0.61
CDK18-222	ENST00000515494	C4BPA	P04003	597 aa	Known RBP	11.26	□□□□□ -0.61
CDK18-222	ENST00000515494	FGFR4	P22455	802 aa		11.26	□□□□□ -0.61
CDK18-222	ENST00000515494	TRADD	Q15628	312 aa		11.26	□□□□□ -0.61
CDK18-222	ENST00000515494	IFI16	Q16666	785 aa	Known RBP	11.26	□□□□□ -0.61
CDK18-222	ENST00000515494	MORN1	Q5T089	497 aa		11.26	□□□□□ -0.61
CDK18-222	ENST00000515494	NAA35	Q5VZE5	725 aa		11.26	□□□□□ -0.61
CDK18-222	ENST00000515494	LLGL2	Q6P1M3	1020 aa		11.26	□□□□□ -0.61
CDK18-222	ENST00000515494	WDR93	Q6P2C0	686 aa		11.26	□□□□□ -0.61
CDK18-222	ENST00000515494	FAM167A	Q96KS9	214 aa		11.26	□□□□□ -0.61
CDK18-222	ENST00000515494	APOBEC3G	Q9HC16	384 aa	Known RBP	11.26	□□□□□ -0.61
CDK18-222	ENST00000515494	C1orf112	Q9NSG2	853 aa		11.26	□□□□□ -0.61
CDK18-222	ENST00000515494	PMM2	O15305	246 aa		11.26	□□□□□ -0.61
CDK18-222	ENST00000515494	PRKCB	P05771	671 aa		11.26	□□□□□ -0.61
CDK18-222	ENST00000515494	TUBB4B	P68371	445 aa		11.26	□□□□□ -0.61
CDK18-222	ENST00000515494	ZNF211	Q13398	564 aa	Predicted RBP	11.26	□□□□□ -0.61
CDK18-222	ENST00000515494	CASP8	Q14790	479 aa		11.26	□□□□□ -0.61
CDK18-222	ENST00000515494	LLGL1	Q15334	1064 aa		11.26	□□□□□ -0.61
CDK18-222	ENST00000515494	DUSP28	Q4G0W2	176 aa		11.26	□□□□□ -0.61
CDK18-222	ENST00000515494	IER5	Q5VY09	327 aa		11.26	□□□□□ -0.61
CDK18-222	ENST00000515494	C8orf74	Q6P047	294 aa		11.26	□□□□□ -0.61
CDK18-222	ENST00000515494	C15orf39	Q6ZRI6	1047 aa		11.26	□□□□□ -0.61
CDK18-222	ENST00000515494	MMGT1	Q8N4V1	131 aa		11.26	□□□□□ -0.61
CDK18-222	ENST00000515494	HNRNPLL	Q8WVV9	542 aa	Known RBP	11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms