RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 PLCB2Q00722 1185 aa9.03□□□□□ -0.96
CCL28-204ENST00000514421 HSP90AA2PQ14568 343 aaPredicted RBP9.03□□□□□ -0.96
CCL28-204ENST00000514421 SKIV2LQ15477 1246 aaKnown RBP9.03□□□□□ -0.96
CCL28-204ENST00000514421 NAB2Q15742 525 aa9.03□□□□□ -0.96
CCL28-204ENST00000514421 ZBTB6Q15916 424 aa9.03□□□□□ -0.96
CCL28-204ENST00000514421 TCEAL5Q5H9L2 206 aa9.03□□□□□ -0.96
CCL28-204ENST00000514421 GLRA4Q5JXX5 417 aa9.03□□□□□ -0.96
CCL28-204ENST00000514421 ISM2Q6H9L7 571 aa9.03□□□□□ -0.96
CCL28-204ENST00000514421 APTXQ7Z2E3 356 aaKnown RBP9.03□□□□□ -0.96
CCL28-204ENST00000514421 TMEM173Q86WV6 379 aaPredicted RBP9.03□□□□□ -0.96
CCL28-204ENST00000514421 MRPL43Q8N983 215 aaKnown RBP9.03□□□□□ -0.96
CCL28-204ENST00000514421 GLIS3Q8NEA6 775 aa9.03□□□□□ -0.96
CCL28-204ENST00000514421 SCFD1Q8WVM8 642 aa9.03□□□□□ -0.96
CCL28-204ENST00000514421 SNX27Q96L92 541 aa9.03□□□□□ -0.96
CCL28-204ENST00000514421 UROC1Q96N76 676 aa9.03□□□□□ -0.96
CCL28-204ENST00000514421 ZMAT2Q96NC0 199 aaKnown RBP9.03□□□□□ -0.96
CCL28-204ENST00000514421 XPO4Q9C0E2 1151 aaKnown RBP9.03□□□□□ -0.96
CCL28-204ENST00000514421 IKZF4Q9H2S9 585 aa9.03□□□□□ -0.96
CCL28-204ENST00000514421 ASB7Q9H672 318 aa9.03□□□□□ -0.96
CCL28-204ENST00000514421 TLE6Q9H808 572 aa9.03□□□□□ -0.96
CCL28-204ENST00000514421 FANCLQ9NW38 375 aa9.03□□□□□ -0.96
CCL28-204ENST00000514421 CGNQ9P2M7 1197 aaKnown RBP9.03□□□□□ -0.96
CCL28-204ENST00000514421 RWDD2AQ9UIY3 292 aa9.03□□□□□ -0.96
CCL28-204ENST00000514421 COG5Q9UP83 839 aa9.03□□□□□ -0.96
CCL28-204ENST00000514421 NFE2L3Q9Y4A8 694 aa9.03□□□□□ -0.96
CCL28-204ENST00000514421 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.02□□□□□ -0.97
CCL28-204ENST00000514421 CASTOR2A6NHX0 329 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 MEFVO15553 781 aaPredicted RBP9.02□□□□□ -0.97
CCL28-204ENST00000514421 TGFB1I1O43294 461 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 XPOTO43592 962 aaKnown RBP9.02□□□□□ -0.97
CCL28-204ENST00000514421 EXTL3O43909 919 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 KIF20AO95235 890 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 EFEMP2O95967 443 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 SOD2P04179 222 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 CXCL8P10145 99 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 CTSAP10619 480 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 ATP1A3P13637 1013 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 CYP3A5P20815 502 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 TNFSF9P41273 254 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 ACOT2P49753 483 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 PPP2R3AQ06190 1150 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 ELAVL2Q12926 359 aaKnown RBP9.02□□□□□ -0.97
CCL28-204ENST00000514421 SMC1AQ14683 1233 aaKnown RBP9.02□□□□□ -0.97
CCL28-204ENST00000514421 ENOX2Q16206 610 aaKnown RBP9.02□□□□□ -0.97
CCL28-204ENST00000514421 KNOP1Q1ED39 458 aaKnown RBP9.02□□□□□ -0.97
CCL28-204ENST00000514421 BMT2Q1RMZ1 405 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 ZBTB41Q5SVQ8 909 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 CRELD2Q6UXH1 353 aaPredicted RBP9.02□□□□□ -0.97
CCL28-204ENST00000514421 MAMSTRQ6ZN01 415 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 HS2ST1Q7LGA3 356 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 TAS1R1Q7RTX1 841 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 CCDC186Q7Z3E2 898 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 LRRC8AQ8IWT6 810 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 NELFCDQ8IXH7 590 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 GPR65Q8IYL9 337 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 ADSSL1Q8N142 457 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 BCL7CQ8WUZ0 217 aaPredicted RBP9.02□□□□□ -0.97
CCL28-204ENST00000514421 HLA-CQ95604 372 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 FAM212AQ96EL1 285 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 TCF25Q9BQ70 676 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 PCIF1Q9H4Z3 704 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 IGFLR1Q9H665 355 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 KIAA1586Q9HCI6 787 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 ENTPD7Q9NQZ7 604 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 MARCH5Q9NX47 278 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 IFNKQ9P0W0 207 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 ADAM28Q9UKQ2 775 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 SSX2IPQ9Y2D8 614 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 DERAQ9Y315 318 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 IRAK3Q9Y616 596 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 GBF1Q92538 1859 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 UBE4BO95155 1302 aa9.02□□□□□ -0.97
CCL28-204ENST00000514421 A0A1B0GTH6 734 aa9.01□□□□□ -0.97
CCL28-204ENST00000514421 ZNF233A6NK53 670 aa9.01□□□□□ -0.97
CCL28-204ENST00000514421 HIDE1A8MVS5 230 aa9.01□□□□□ -0.97
CCL28-204ENST00000514421 CLIC2O15247 247 aa9.01□□□□□ -0.97
CCL28-204ENST00000514421 TRAPPC3O43617 180 aa9.01□□□□□ -0.97
CCL28-204ENST00000514421 LILRB3O75022 631 aa9.01□□□□□ -0.97
CCL28-204ENST00000514421 B3GAT3O94766 335 aa9.01□□□□□ -0.97
CCL28-204ENST00000514421 CSPG5O95196 566 aa9.01□□□□□ -0.97
CCL28-204ENST00000514421 IL18RAPO95256 599 aa9.01□□□□□ -0.97
CCL28-204ENST00000514421 PBX1P40424 430 aa9.01□□□□□ -0.97
CCL28-204ENST00000514421 NRIP1P48552 1158 aa9.01□□□□□ -0.97
CCL28-204ENST00000514421 CLCNKBP51801 687 aa9.01□□□□□ -0.97
CCL28-204ENST00000514421 UBASH3AP57075 661 aa9.01□□□□□ -0.97
CCL28-204ENST00000514421 SOX4Q06945 474 aaPredicted RBP9.01□□□□□ -0.97
CCL28-204ENST00000514421 HYAL1Q12794 435 aa9.01□□□□□ -0.97
CCL28-204ENST00000514421 TBX2Q13207 712 aaPredicted RBP9.01□□□□□ -0.97
CCL28-204ENST00000514421 ADAM15Q13444 863 aa9.01□□□□□ -0.97
CCL28-204ENST00000514421 NR1I3Q14994 352 aa9.01□□□□□ -0.97
CCL28-204ENST00000514421 UPP1Q16831 310 aa9.01□□□□□ -0.97
CCL28-204ENST00000514421 USP41Q3LFD5 358 aa9.01□□□□□ -0.97
CCL28-204ENST00000514421 FNDC1Q4ZHG4 1894 aaPredicted RBP9.01□□□□□ -0.97
CCL28-204ENST00000514421 KIAA0319Q5VV43 1072 aa9.01□□□□□ -0.97
CCL28-204ENST00000514421 PLPP4Q5VZY2 271 aa9.01□□□□□ -0.97
CCL28-204ENST00000514421 KIAA1841Q6NSI8 718 aa9.01□□□□□ -0.97
CCL28-204ENST00000514421 ARMCX5Q6P1M9 558 aa9.01□□□□□ -0.97
CCL28-204ENST00000514421 RBM23Q86U06 439 aaKnown RBP9.01□□□□□ -0.97
CCL28-204ENST00000514421 VSTM4Q8IW00 320 aa9.01□□□□□ -0.97
CCL28-204ENST00000514421 GPD1LQ8N335 351 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms