RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 PLA2G12BQ9BX93 195 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 SLC12A5Q9H2X9 1139 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 SLAMF7Q9NQ25 335 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 PNPOQ9NVS9 261 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 ABCF2Q9UG63 623 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 FAM50BQ9Y247 325 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 LRRIQ1Q96JM4 1722 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 SYCP2Q9BX26 1530 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 RIMS1Q86UR5 1692 aaKnown RBP5.21□□□□□ -1.57
HTT-210ENST00000512909 HECW2Q9P2P5 1572 aa5.21□□□□□ -1.57
HTT-210ENST00000512909 RICTORQ6R327 1708 aa5.21□□□□□ -1.58
HTT-210ENST00000512909 CFAP69A5D8W1 941 aa5.21□□□□□ -1.58
HTT-210ENST00000512909 CYP27B1O15528 508 aa5.21□□□□□ -1.58
HTT-210ENST00000512909 POMCP01189 267 aa5.21□□□□□ -1.58
HTT-210ENST00000512909 FTH1P19P0C7X4 201 aa5.21□□□□□ -1.58
HTT-210ENST00000512909 EDNRBP24530 442 aa5.21□□□□□ -1.58
HTT-210ENST00000512909 MGAT1P26572 445 aa5.21□□□□□ -1.58
HTT-210ENST00000512909 CTXN1P60606 82 aa5.21□□□□□ -1.58
HTT-210ENST00000512909 FAM193AP78312 1265 aa5.21□□□□□ -1.58
HTT-210ENST00000512909 GPSM2P81274 684 aa5.21□□□□□ -1.58
HTT-210ENST00000512909 NOGQ13253 232 aa5.21□□□□□ -1.58
HTT-210ENST00000512909 MRPL49Q13405 166 aaKnown RBP5.21□□□□□ -1.58
HTT-210ENST00000512909 GRM3Q14832 879 aa5.21□□□□□ -1.58
HTT-210ENST00000512909 SAFBQ15424 915 aaKnown RBP eCLIP5.21□□□□□ -1.58
HTT-210ENST00000512909 ELAVL1Q15717 326 aaKnown RBP5.21□□□□□ -1.58
HTT-210ENST00000512909 LCE1DQ5T752 114 aa5.21□□□□□ -1.58
HTT-210ENST00000512909 AFMIDQ63HM1 303 aa5.21□□□□□ -1.58
HTT-210ENST00000512909 ZNF572Q7Z3I7 529 aaPredicted RBP5.21□□□□□ -1.58
HTT-210ENST00000512909 MB21D1Q8N884 522 aa5.21□□□□□ -1.58
HTT-210ENST00000512909 CHST13Q8NET6 341 aa5.21□□□□□ -1.58
HTT-210ENST00000512909 PPP1R35Q8TAP8 253 aa5.21□□□□□ -1.58
HTT-210ENST00000512909 TFAP2CQ92754 450 aa5.21□□□□□ -1.58
HTT-210ENST00000512909 RUNDC1Q96C34 613 aa5.21□□□□□ -1.58
HTT-210ENST00000512909 FAM89AQ96GI7 184 aa5.21□□□□□ -1.58
HTT-210ENST00000512909 ZNF512Q96ME7 567 aaPredicted RBP5.21□□□□□ -1.58
HTT-210ENST00000512909 MRI1Q9BV20 369 aa5.21□□□□□ -1.58
HTT-210ENST00000512909 KRTAP4-7Q9BYR0 210 aa5.21□□□□□ -1.58
HTT-210ENST00000512909 C11orf54Q9H0W9 315 aaPredicted RBP5.21□□□□□ -1.58
HTT-210ENST00000512909 CPA4Q9UI42 421 aa5.21□□□□□ -1.58
HTT-210ENST00000512909 PCDHB1Q9Y5F3 818 aa5.21□□□□□ -1.58
HTT-210ENST00000512909 ACTL7AQ9Y615 435 aa5.21□□□□□ -1.58
HTT-210ENST00000512909 MADDQ8WXG6 1647 aa5.21□□□□□ -1.58
HTT-210ENST00000512909 EHBP1L1Q8N3D4 1523 aa5.21□□□□□ -1.58
HTT-210ENST00000512909 UHRF1BP1Q6BDS2 1440 aa5.21□□□□□ -1.58
HTT-210ENST00000512909 CDC42BPBQ9Y5S2 1711 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 ARHGEF40Q8TER5 1519 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 CCDC194A0A1B0GVG4 234 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 CAPN14A8MX76 684 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 HOXA3O43365 443 aaPredicted RBP5.2□□□□□ -1.58
HTT-210ENST00000512909 B3GALT2O43825 422 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 PLATP00750 562 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 GNAI2P04899 355 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 IFIT2P09913 472 aaKnown RBP5.2□□□□□ -1.58
HTT-210ENST00000512909 MSX2P35548 267 aaPredicted RBP5.2□□□□□ -1.58
HTT-210ENST00000512909 MAP2K6P52564 334 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 CLRN1P58418 232 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 MXRA7P84157 204 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 PURAQ00577 322 aaKnown RBP5.2□□□□□ -1.58
HTT-210ENST00000512909 CRHR2Q13324 411 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 ANO6Q4KMQ2 910 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 ATXN7L2Q5T6C5 722 aaPredicted RBP5.2□□□□□ -1.58
HTT-210ENST00000512909 ZNF529Q6P280 563 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 POLNQ7Z5Q5 900 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 APBB1IPQ7Z5R6 666 aaPredicted RBP5.2□□□□□ -1.58
HTT-210ENST00000512909 ADGRE4PQ86SQ3 457 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 NSUN6Q8TEA1 469 aaKnown RBP5.2□□□□□ -1.58
HTT-210ENST00000512909 ST8SIA2Q92186 375 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 TIFAQ96CG3 184 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 SLC35A4Q96G79 324 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 TNIP3Q96KP6 325 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 PHACTR3Q96KR7 559 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 GNRHR2Q96P88 292 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 B3GNT5Q9BYG0 378 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 DEF6Q9H4E7 631 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 PARD6AQ9NPB6 346 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 PLA2G3Q9NZ20 509 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 DDX20Q9UHI6 824 aaKnown RBP5.2□□□□□ -1.58
HTT-210ENST00000512909 USP25Q9UHP3 1055 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 ZFR2Q9UPR6 939 aaKnown RBP5.2□□□□□ -1.58
HTT-210ENST00000512909 MYOM3Q5VTT5 1437 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 TIAM1Q13009 1591 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 SAMD9LQ8IVG5 1584 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 BCORL1Q5H9F3 1711 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 CAMSAP2Q08AD1 1489 aa5.2□□□□□ -1.58
HTT-210ENST00000512909 PREX2Q70Z35 1606 aa5.19□□□□□ -1.58
HTT-210ENST00000512909 KANK1Q14678 1352 aa5.19□□□□□ -1.58
HTT-210ENST00000512909 ABCC1P33527 1531 aa5.19□□□□□ -1.58
HTT-210ENST00000512909 ZMYM4Q5VZL5 1548 aa5.19□□□□□ -1.58
HTT-210ENST00000512909 ADAMTSL3P82987 1691 aa5.19□□□□□ -1.58
HTT-210ENST00000512909 OTOL1A6NHN0 477 aaPredicted RBP5.19□□□□□ -1.58
HTT-210ENST00000512909 PQBP1O60828 265 aaKnown RBP5.19□□□□□ -1.58
HTT-210ENST00000512909 TUSC2O75896 110 aa5.19□□□□□ -1.58
HTT-210ENST00000512909 AMHP03971 560 aa5.19□□□□□ -1.58
HTT-210ENST00000512909 ALDH2P05091 517 aa5.19□□□□□ -1.58
HTT-210ENST00000512909 CD1AP06126 327 aa5.19□□□□□ -1.58
HTT-210ENST00000512909 INHBBP09529 407 aa5.19□□□□□ -1.58
HTT-210ENST00000512909 MALP21145 153 aa5.19□□□□□ -1.58
HTT-210ENST00000512909 HK3P52790 923 aa5.19□□□□□ -1.58
HTT-210ENST00000512909 TARDBPQ13148 414 aaKnown RBP eCLIP5.19□□□□□ -1.58
HTT-210ENST00000512909 FAM214AQ32MH5 1076 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms