RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 CLCNKBP51801 687 aa21.01■□□□□ 0.95
HMGCS1-206ENST00000511774 ROR1Q01973 937 aa21.01■□□□□ 0.95
HMGCS1-206ENST00000511774 N4BP2L1Q5TBK1 243 aaPredicted RBP21.01■□□□□ 0.95
HMGCS1-206ENST00000511774 PPP1R10Q96QC0 940 aaKnown RBP21.01■□□□□ 0.95
HMGCS1-206ENST00000511774 TRMT61BQ9BVS5 477 aaKnown RBP21.01■□□□□ 0.95
HMGCS1-206ENST00000511774 ZFP14Q9HCL3 533 aa21.01■□□□□ 0.95
HMGCS1-206ENST00000511774 RBM12Q9NTZ6 932 aaKnown RBP21.01■□□□□ 0.95
HMGCS1-206ENST00000511774 FASNP49327 2511 aaKnown RBP21.01■□□□□ 0.95
HMGCS1-206ENST00000511774 ARNTLO00327 626 aa21■□□□□ 0.95
HMGCS1-206ENST00000511774 CDC45O75419 566 aa21■□□□□ 0.95
HMGCS1-206ENST00000511774 B3GAT3O94766 335 aa21■□□□□ 0.95
HMGCS1-206ENST00000511774 ABLIM3O94929 683 aa21■□□□□ 0.95
HMGCS1-206ENST00000511774 GDI1P31150 447 aa21■□□□□ 0.95
HMGCS1-206ENST00000511774 CXCL12P48061 93 aa21■□□□□ 0.95
HMGCS1-206ENST00000511774 FAM187BQ17R55 369 aa21■□□□□ 0.95
HMGCS1-206ENST00000511774 RTL10Q7L3V2 364 aa21■□□□□ 0.95
HMGCS1-206ENST00000511774 HS6ST3Q8IZP7 471 aa21■□□□□ 0.95
HMGCS1-206ENST00000511774 RXFP3Q9NSD7 469 aa21■□□□□ 0.95
HMGCS1-206ENST00000511774 PRMT7Q9NVM4 692 aaPredicted RBP21■□□□□ 0.95
HMGCS1-206ENST00000511774 GDAQ9Y2T3 454 aa21■□□□□ 0.95
HMGCS1-206ENST00000511774 WNT7AO00755 349 aa20.99■□□□□ 0.95
HMGCS1-206ENST00000511774 TM4SF5O14894 197 aa20.99■□□□□ 0.95
HMGCS1-206ENST00000511774 GJA1P17302 382 aa20.99■□□□□ 0.95
HMGCS1-206ENST00000511774 CCNE1P24864 410 aa20.99■□□□□ 0.95
HMGCS1-206ENST00000511774 SOX4Q06945 474 aaPredicted RBP20.99■□□□□ 0.95
HMGCS1-206ENST00000511774 STK3Q13188 491 aa20.99■□□□□ 0.95
HMGCS1-206ENST00000511774 SLC8B1Q6J4K2 584 aa20.99■□□□□ 0.95
HMGCS1-206ENST00000511774 Q6ZS52 159 aa20.99■□□□□ 0.95
HMGCS1-206ENST00000511774 ZNF461Q8TAF7 563 aa20.99■□□□□ 0.95
HMGCS1-206ENST00000511774 RSPRY1Q96DX4 576 aa20.99■□□□□ 0.95
HMGCS1-206ENST00000511774 PRIMPOLQ96LW4 560 aa20.99■□□□□ 0.95
HMGCS1-206ENST00000511774 IER2Q9BTL4 223 aa20.99■□□□□ 0.95
HMGCS1-206ENST00000511774 TRPV5Q9NQA5 729 aa20.99■□□□□ 0.95
HMGCS1-206ENST00000511774 ANGPTL2Q9UKU9 493 aa20.99■□□□□ 0.95
HMGCS1-206ENST00000511774 ANKRD11Q6UB99 2663 aaPredicted RBP20.99■□□□□ 0.95
HMGCS1-206ENST00000511774 N4BP3O15049 544 aa20.98■□□□□ 0.95
HMGCS1-206ENST00000511774 MARCH6O60337 910 aa20.98■□□□□ 0.95
HMGCS1-206ENST00000511774 SOX9P48436 509 aa20.98■□□□□ 0.95
HMGCS1-206ENST00000511774 UPP1Q16831 310 aa20.98■□□□□ 0.95
HMGCS1-206ENST00000511774 HEATR6Q6AI08 1181 aaKnown RBP20.98■□□□□ 0.95
HMGCS1-206ENST00000511774 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.98■□□□□ 0.95
HMGCS1-206ENST00000511774 FAM177A1Q8N128 213 aaPredicted RBP20.98■□□□□ 0.95
HMGCS1-206ENST00000511774 FAM160A2Q8N612 972 aaPredicted RBP20.98■□□□□ 0.95
HMGCS1-206ENST00000511774 IRF7Q92985 503 aa20.98■□□□□ 0.95
HMGCS1-206ENST00000511774 CCDC113Q9H0I3 377 aa20.98■□□□□ 0.95
HMGCS1-206ENST00000511774 AKAP13Q12802 2813 aa20.97■□□□□ 0.95
HMGCS1-206ENST00000511774 KIF26AQ9ULI4 1882 aaPredicted RBP20.97■□□□□ 0.95
HMGCS1-206ENST00000511774 CPLX1O14810 134 aa20.97■□□□□ 0.95
HMGCS1-206ENST00000511774 LRG1P02750 347 aa20.97■□□□□ 0.95
HMGCS1-206ENST00000511774 PSMC3P17980 439 aa20.97■□□□□ 0.95
HMGCS1-206ENST00000511774 RBM25P49756 843 aaKnown RBP20.97■□□□□ 0.95
HMGCS1-206ENST00000511774 PTGDRQ13258 359 aa20.97■□□□□ 0.95
HMGCS1-206ENST00000511774 SF3A2Q15428 464 aaKnown RBP20.97■□□□□ 0.95
HMGCS1-206ENST00000511774 CCDC6Q16204 474 aa20.97■□□□□ 0.95
HMGCS1-206ENST00000511774 ANKS3Q6ZW76 656 aa20.97■□□□□ 0.95
HMGCS1-206ENST00000511774 SLFN12Q8IYM2 578 aa20.97■□□□□ 0.95
HMGCS1-206ENST00000511774 SMARCD2Q92925 531 aa20.97■□□□□ 0.95
HMGCS1-206ENST00000511774 INSL5Q9Y5Q6 135 aa20.97■□□□□ 0.95
HMGCS1-206ENST00000511774 EML5Q05BV3 1969 aa20.96■□□□□ 0.95
HMGCS1-206ENST00000511774 PRKCBP05771 671 aa20.96■□□□□ 0.95
HMGCS1-206ENST00000511774 NR5A1Q13285 461 aa20.96■□□□□ 0.95
HMGCS1-206ENST00000511774 PRPF4BQ13523 1007 aaKnown RBP20.96■□□□□ 0.95
HMGCS1-206ENST00000511774 PPP2R5DQ14738 602 aa20.96■□□□□ 0.95
HMGCS1-206ENST00000511774 TXNDC11Q6PKC3 985 aa20.96■□□□□ 0.95
HMGCS1-206ENST00000511774 TCEAL8Q8IYN2 117 aa20.96■□□□□ 0.95
HMGCS1-206ENST00000511774 SPEM1Q8N4L4 309 aa20.96■□□□□ 0.95
HMGCS1-206ENST00000511774 CEP72Q9P209 647 aa20.96■□□□□ 0.95
HMGCS1-206ENST00000511774 ATG2BQ96BY7 2078 aa20.95■□□□□ 0.94
HMGCS1-206ENST00000511774 PRRG1O14668 218 aa20.95■□□□□ 0.94
HMGCS1-206ENST00000511774 PAPSS2O95340 614 aaPredicted RBP20.95■□□□□ 0.94
HMGCS1-206ENST00000511774 SPATA31C1P0DKV0 1188 aa20.95■□□□□ 0.94
HMGCS1-206ENST00000511774 HOXB3P14651 431 aaPredicted RBP20.95■□□□□ 0.94
HMGCS1-206ENST00000511774 ATF2P15336 505 aa20.95■□□□□ 0.94
HMGCS1-206ENST00000511774 LIG1P18858 919 aa20.95■□□□□ 0.94
HMGCS1-206ENST00000511774 ARPP19P56211 112 aa20.95■□□□□ 0.94
HMGCS1-206ENST00000511774 SHC2P98077 582 aa20.95■□□□□ 0.94
HMGCS1-206ENST00000511774 RUFY3Q7L099 469 aa20.95■□□□□ 0.94
HMGCS1-206ENST00000511774 TNFRSF25Q93038 417 aa20.95■□□□□ 0.94
HMGCS1-206ENST00000511774 ZNF274Q96GC6 653 aaPredicted RBP20.95■□□□□ 0.94
HMGCS1-206ENST00000511774 CYP4F11Q9HBI6 524 aa20.95■□□□□ 0.94
HMGCS1-206ENST00000511774 WDFY3Q8IZQ1 3526 aa20.95■□□□□ 0.94
HMGCS1-206ENST00000511774 MICAL2O94851 1124 aa20.94■□□□□ 0.94
HMGCS1-206ENST00000511774 BAG4O95429 457 aaKnown RBP20.94■□□□□ 0.94
HMGCS1-206ENST00000511774 PSMA5P28066 241 aa20.94■□□□□ 0.94
HMGCS1-206ENST00000511774 NT5DC1Q5TFE4 455 aa20.94■□□□□ 0.94
HMGCS1-206ENST00000511774 PDZD4Q76G19 769 aaPredicted RBP20.94■□□□□ 0.94
HMGCS1-206ENST00000511774 LONP2Q86WA8 852 aa20.94■□□□□ 0.94
HMGCS1-206ENST00000511774 ZBTB8OSQ8IWT0 167 aa20.94■□□□□ 0.94
HMGCS1-206ENST00000511774 CEP120Q8N960 986 aa20.94■□□□□ 0.94
HMGCS1-206ENST00000511774 ZSCAN18Q8TBC5 510 aaPredicted RBP20.94■□□□□ 0.94
HMGCS1-206ENST00000511774 KIFC3Q9BVG8 833 aa20.94■□□□□ 0.94
HMGCS1-206ENST00000511774 TRPV4Q9HBA0 871 aa20.94■□□□□ 0.94
HMGCS1-206ENST00000511774 ZSWIM6Q9HCJ5 1215 aa20.94■□□□□ 0.94
HMGCS1-206ENST00000511774 POLD4Q9HCU8 107 aa20.94■□□□□ 0.94
HMGCS1-206ENST00000511774 PCDHA12Q9UN75 941 aa20.94■□□□□ 0.94
HMGCS1-206ENST00000511774 PKD1L2Q7Z442 2459 aa20.94■□□□□ 0.94
HMGCS1-206ENST00000511774 SLC38A8A6NNN8 435 aa20.93■□□□□ 0.94
HMGCS1-206ENST00000511774 HEPACAM2A8MVW5 462 aa20.93■□□□□ 0.94
HMGCS1-206ENST00000511774 ACKR2O00590 384 aa20.93■□□□□ 0.94
HMGCS1-206ENST00000511774 ZNF197O14709 1029 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms