RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 HES2Q9Y543 173 aa9.52□□□□□ -0.89
PDPN-209ENST00000510906 ATG2AQ2TAZ0 1938 aa9.52□□□□□ -0.89
PDPN-209ENST00000510906 ARHGEF35A5YM69 484 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 LRRIQ4A6NIV6 560 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 FIGNL2A6NMB9 653 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 PP2D1A8MPX8 630 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 MBTPS2O43462 519 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 RECKO95980 971 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 GALTP07902 379 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 ARF4P18085 180 aaPredicted RBP9.51□□□□□ -0.89
PDPN-209ENST00000510906 CYP11B2P19099 503 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 NCLP19338 710 aaKnown RBP9.51□□□□□ -0.89
PDPN-209ENST00000510906 GRNP28799 593 aaKnown RBP9.51□□□□□ -0.89
PDPN-209ENST00000510906 CCT6AP40227 531 aaKnown RBP9.51□□□□□ -0.89
PDPN-209ENST00000510906 MAPK8P45983 427 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 SLC11A1P49279 550 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 ALDH7A1P49419 539 aaKnown RBP9.51□□□□□ -0.89
PDPN-209ENST00000510906 RNASELQ05823 741 aaKnown RBP9.51□□□□□ -0.89
PDPN-209ENST00000510906 ZP2Q05996 745 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 SMAD4Q13485 552 aaKnown RBP9.51□□□□□ -0.89
PDPN-209ENST00000510906 IL17AQ16552 155 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 DUSP6Q16828 381 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 ARSJQ5FYB0 599 aaPredicted RBP9.51□□□□□ -0.89
PDPN-209ENST00000510906 SAMD5Q5TGI4 173 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 HAUS3Q68CZ6 603 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 PDE12Q6L8Q7 609 aaKnown RBP9.51□□□□□ -0.89
PDPN-209ENST00000510906 NOTUMQ6P988 496 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 XKR5Q6UX68 686 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 LRRC69Q6ZNQ3 347 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 CDR2LQ86X02 465 aaPredicted RBP9.51□□□□□ -0.89
PDPN-209ENST00000510906 IGSF22Q8N9C0 903 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 MCPH1Q8NEM0 835 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 SNX29Q8TEQ0 813 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 RSPH1Q8WYR4 309 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 BSNDQ8WZ55 320 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 NFKBIZQ9BYH8 718 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 EPHX3Q9H6B9 360 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 RSAD1Q9HA92 442 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 POLD4Q9HCU8 107 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 IPPQ9Y573 584 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 KCNMB2Q9Y691 235 aa9.51□□□□□ -0.89
PDPN-209ENST00000510906 H3BQV1 296 aa9.5□□□□□ -0.89
PDPN-209ENST00000510906 DDHD2O94830 711 aa9.5□□□□□ -0.89
PDPN-209ENST00000510906 POMCP01189 267 aa9.5□□□□□ -0.89
PDPN-209ENST00000510906 F11P03951 625 aa9.5□□□□□ -0.89
PDPN-209ENST00000510906 ITGA4P13612 1032 aa9.5□□□□□ -0.89
PDPN-209ENST00000510906 MUTP22033 750 aa9.5□□□□□ -0.89
PDPN-209ENST00000510906 CDC25AP30304 524 aa9.5□□□□□ -0.89
PDPN-209ENST00000510906 AXLP30530 894 aa9.5□□□□□ -0.89
PDPN-209ENST00000510906 MCM2P49736 904 aa9.5□□□□□ -0.89
PDPN-209ENST00000510906 NCBP1Q09161 790 aaKnown RBP9.5□□□□□ -0.89
PDPN-209ENST00000510906 PDIA5Q14554 519 aa9.5□□□□□ -0.89
PDPN-209ENST00000510906 PCBP1Q15365 356 aaKnown RBP eCLIP9.5□□□□□ -0.89
PDPN-209ENST00000510906 TRIP4Q15650 581 aaPredicted RBP9.5□□□□□ -0.89
PDPN-209ENST00000510906 SMAD2Q15796 467 aaKnown RBP9.5□□□□□ -0.89
PDPN-209ENST00000510906 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.5□□□□□ -0.89
PDPN-209ENST00000510906 CDCA2Q69YH5 1023 aaPredicted RBP9.5□□□□□ -0.89
PDPN-209ENST00000510906 NLRP8Q86W28 1048 aa9.5□□□□□ -0.89
PDPN-209ENST00000510906 SMRP1Q8NCR6 262 aa9.5□□□□□ -0.89
PDPN-209ENST00000510906 URGCPQ8TCY9 931 aa9.5□□□□□ -0.89
PDPN-209ENST00000510906 AUTS2Q8WXX7 1259 aa9.5□□□□□ -0.89
PDPN-209ENST00000510906 CCDC51Q96ER9 411 aa9.5□□□□□ -0.89
PDPN-209ENST00000510906 TMEM169Q96HH4 297 aa9.5□□□□□ -0.89
PDPN-209ENST00000510906 IGSF21Q96ID5 467 aa9.5□□□□□ -0.89
PDPN-209ENST00000510906 CDCA3Q99618 268 aaPredicted RBP9.5□□□□□ -0.89
PDPN-209ENST00000510906 APOL6Q9BWW8 343 aa9.5□□□□□ -0.89
PDPN-209ENST00000510906 VN1R3Q9BXE9 311 aa9.5□□□□□ -0.89
PDPN-209ENST00000510906 CSRNP2Q9H175 543 aa9.5□□□□□ -0.89
PDPN-209ENST00000510906 BHMT2Q9H2M3 363 aa9.5□□□□□ -0.89
PDPN-209ENST00000510906 NXF3Q9H4D5 531 aaKnown RBP9.5□□□□□ -0.89
PDPN-209ENST00000510906 NGRNQ9NPE2 291 aaKnown RBP9.5□□□□□ -0.89
PDPN-209ENST00000510906 DDX19AQ9NUU7 478 aaKnown RBP9.5□□□□□ -0.89
PDPN-209ENST00000510906 SMC3Q9UQE7 1217 aa9.5□□□□□ -0.89
PDPN-209ENST00000510906 FAM50BQ9Y247 325 aa9.5□□□□□ -0.89
PDPN-209ENST00000510906 USP20Q9Y2K6 914 aa9.5□□□□□ -0.89
PDPN-209ENST00000510906 PLXNA4Q9HCM2 1894 aa9.5□□□□□ -0.89
PDPN-209ENST00000510906 CNTNAP2Q9UHC6 1331 aa9.5□□□□□ -0.89
PDPN-209ENST00000510906 ARID2Q68CP9 1835 aa9.49□□□□□ -0.89
PDPN-209ENST00000510906 C2orf71A6NGG8 1288 aa9.49□□□□□ -0.89
PDPN-209ENST00000510906 E9PMD0 336 aa9.49□□□□□ -0.89
PDPN-209ENST00000510906 LAD1O00515 517 aa9.49□□□□□ -0.89
PDPN-209ENST00000510906 GFRA3O60609 400 aa9.49□□□□□ -0.89
PDPN-209ENST00000510906 NPTXRO95502 500 aa9.49□□□□□ -0.89
PDPN-209ENST00000510906 EYA4O95677 639 aa9.49□□□□□ -0.89
PDPN-209ENST00000510906 LIG1P18858 919 aa9.49□□□□□ -0.89
PDPN-209ENST00000510906 CA8P35219 290 aa9.49□□□□□ -0.89
PDPN-209ENST00000510906 MLH1P40692 756 aa9.49□□□□□ -0.89
PDPN-209ENST00000510906 COASYQ13057 564 aa9.49□□□□□ -0.89
PDPN-209ENST00000510906 KCNC3Q14003 757 aa9.49□□□□□ -0.89
PDPN-209ENST00000510906 SMC1AQ14683 1233 aaKnown RBP9.49□□□□□ -0.89
PDPN-209ENST00000510906 RILPL1Q5EBL4 403 aa9.49□□□□□ -0.89
PDPN-209ENST00000510906 LLGL2Q6P1M3 1020 aa9.49□□□□□ -0.89
PDPN-209ENST00000510906 KCNK18Q7Z418 384 aa9.49□□□□□ -0.89
PDPN-209ENST00000510906 ADHFE1Q8IWW8 467 aa9.49□□□□□ -0.89
PDPN-209ENST00000510906 VPS52Q8N1B4 723 aa9.49□□□□□ -0.89
PDPN-209ENST00000510906 MRPL43Q8N983 215 aaKnown RBP9.49□□□□□ -0.89
PDPN-209ENST00000510906 CNNM3Q8NE01 707 aa9.49□□□□□ -0.89
PDPN-209ENST00000510906 GAD1Q99259 594 aa9.49□□□□□ -0.89
PDPN-209ENST00000510906 MMTAG2Q9BU76 263 aaKnown RBP9.49□□□□□ -0.89
PDPN-209ENST00000510906 KIFC3Q9BVG8 833 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms