RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 EML1O00423 815 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 AKR1B10O60218 316 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 SLITRK3O94933 977 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 CMA1P23946 247 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 EDNRBP24530 442 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 GNL1P36915 607 aaPredicted RBP13.34□□□□□ -0.27
LIN54-210ENST00000510877 SNW1Q13573 536 aaKnown RBP13.34□□□□□ -0.27
LIN54-210ENST00000510877 PKN1Q16512 942 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 RGL4Q8IZJ4 473 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 HVCN1Q96D96 273 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 EEF2KMTQ96G04 330 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 HPDLQ96IR7 371 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 C17orf80Q9BSJ5 609 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 PBX4Q9BYU1 374 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 SDK1Q7Z5N4 2213 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 STX1AQ16623 288 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 TYW1BQ6NUM6 668 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 UNC13DQ70J99 1090 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 MCRS1Q96EZ8 462 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 FAM81BQ96LP2 452 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 TBX20Q9UMR3 447 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 SCN9AQ15858 1988 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 ITGB3P05106 788 aa13.33□□□□□ -0.27
LIN54-210ENST00000510877 TNFAIP3P21580 790 aa13.33□□□□□ -0.27
LIN54-210ENST00000510877 WEE1P30291 646 aa13.33□□□□□ -0.27
LIN54-210ENST00000510877 PFKPQ01813 784 aa13.33□□□□□ -0.27
LIN54-210ENST00000510877 TJAP1Q5JTD0 557 aa13.33□□□□□ -0.27
LIN54-210ENST00000510877 USP6NLQ92738 828 aa13.33□□□□□ -0.27
LIN54-210ENST00000510877 CTAGE1Q96RT6 745 aa13.33□□□□□ -0.27
LIN54-210ENST00000510877 TBX21Q9UL17 535 aa13.33□□□□□ -0.27
LIN54-210ENST00000510877 MTMR6Q9Y217 621 aa13.33□□□□□ -0.27
LIN54-210ENST00000510877 ZNF263O14978 683 aa13.33□□□□□ -0.28
LIN54-210ENST00000510877 CCL16O15467 120 aa13.33□□□□□ -0.28
LIN54-210ENST00000510877 SYNCRIPO60506 623 aaKnown RBP13.33□□□□□ -0.28
LIN54-210ENST00000510877 APOEP02649 317 aa13.33□□□□□ -0.28
LIN54-210ENST00000510877 LHX1P48742 406 aa13.33□□□□□ -0.28
LIN54-210ENST00000510877 SP2Q02086 613 aa13.33□□□□□ -0.28
LIN54-210ENST00000510877 SCYL2Q6P3W7 929 aa13.33□□□□□ -0.28
LIN54-210ENST00000510877 NELFBQ8WX92 580 aa13.33□□□□□ -0.28
LIN54-210ENST00000510877 FBXO32Q969P5 355 aa13.33□□□□□ -0.28
LIN54-210ENST00000510877 ALS2CR12Q96Q35 445 aa13.33□□□□□ -0.28
LIN54-210ENST00000510877 C8AP07357 584 aa13.33□□□□□ -0.28
LIN54-210ENST00000510877 SLFN14P0C7P3 912 aa13.33□□□□□ -0.28
LIN54-210ENST00000510877 CXCL8P10145 99 aa13.33□□□□□ -0.28
LIN54-210ENST00000510877 MFAP3P55082 362 aa13.33□□□□□ -0.28
LIN54-210ENST00000510877 ARHGAP29Q52LW3 1261 aa13.33□□□□□ -0.28
LIN54-210ENST00000510877 PRR23BQ6ZRT6 265 aa13.33□□□□□ -0.28
LIN54-210ENST00000510877 EMID1Q96A84 441 aaPredicted RBP13.33□□□□□ -0.28
LIN54-210ENST00000510877 CDY1Q9Y6F8 540 aa13.33□□□□□ -0.28
LIN54-210ENST00000510877 NPHP3-ACAD11A0A0J9YXS1 232 aa13.32□□□□□ -0.28
LIN54-210ENST00000510877 A0A0U1RQF3 1178 aa13.32□□□□□ -0.28
LIN54-210ENST00000510877 PABPN1LA6NDY0 278 aaKnown RBP13.32□□□□□ -0.28
LIN54-210ENST00000510877 MYMKA6NI61 221 aa13.32□□□□□ -0.28
LIN54-210ENST00000510877 UBE3AQ05086 875 aa13.32□□□□□ -0.28
LIN54-210ENST00000510877 AMHR2Q16671 573 aa13.32□□□□□ -0.28
LIN54-210ENST00000510877 BBS5Q8N3I7 341 aa13.32□□□□□ -0.28
LIN54-210ENST00000510877 ZFP14Q9HCL3 533 aa13.32□□□□□ -0.28
LIN54-210ENST00000510877 PCDHA7Q9UN72 937 aa13.32□□□□□ -0.28
LIN54-210ENST00000510877 COL4A5P29400 1685 aa13.32□□□□□ -0.28
LIN54-210ENST00000510877 THAP12O43422 761 aa13.32□□□□□ -0.28
LIN54-210ENST00000510877 KIF5CO60282 957 aa13.32□□□□□ -0.28
LIN54-210ENST00000510877 COASYQ13057 564 aa13.32□□□□□ -0.28
LIN54-210ENST00000510877 GJD3Q8N144 294 aa13.32□□□□□ -0.28
LIN54-210ENST00000510877 SLC7A14Q8TBB6 771 aa13.32□□□□□ -0.28
LIN54-210ENST00000510877 PBXIP1Q96AQ6 731 aa13.32□□□□□ -0.28
LIN54-210ENST00000510877 CCDC97Q96F63 343 aaPredicted RBP13.32□□□□□ -0.28
LIN54-210ENST00000510877 CDCA3Q99618 268 aaPredicted RBP13.32□□□□□ -0.28
LIN54-210ENST00000510877 C16orf70Q9BSU1 422 aa13.32□□□□□ -0.28
LIN54-210ENST00000510877 SLC9A3R1O14745 358 aaPredicted RBP13.32□□□□□ -0.28
LIN54-210ENST00000510877 HMBSP08397 361 aa13.32□□□□□ -0.28
LIN54-210ENST00000510877 RPL9P32969 192 aaKnown RBP13.32□□□□□ -0.28
LIN54-210ENST00000510877 AUTS2Q8WXX7 1259 aa13.32□□□□□ -0.28
LIN54-210ENST00000510877 RSRC1Q96IZ7 334 aaKnown RBP13.32□□□□□ -0.28
LIN54-210ENST00000510877 MFSD14AQ96MC6 490 aa13.32□□□□□ -0.28
LIN54-210ENST00000510877 C1QTNF1Q9BXJ1 281 aa13.32□□□□□ -0.28
LIN54-210ENST00000510877 BCO2Q9BYV7 579 aa13.32□□□□□ -0.28
LIN54-210ENST00000510877 TTLL3Q9Y4R7 772 aa13.32□□□□□ -0.28
LIN54-210ENST00000510877 I3L4J1 428 aa13.32□□□□□ -0.28
LIN54-210ENST00000510877 CCDC88AQ3V6T2 1871 aa13.32□□□□□ -0.28
LIN54-210ENST00000510877 SYT2Q8N9I0 419 aaPredicted RBP13.32□□□□□ -0.28
LIN54-210ENST00000510877 NAGPAQ9UK23 515 aa13.32□□□□□ -0.28
LIN54-210ENST00000510877 MYO7AQ13402 2215 aa13.32□□□□□ -0.28
LIN54-210ENST00000510877 BCORQ6W2J9 1755 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 ACADMP11310 421 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 NFKBIAP25963 317 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 TCEAL5Q5H9L2 206 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 FAM228AQ86W67 206 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 CTNNBL1Q8WYA6 563 aaPredicted RBP13.31□□□□□ -0.28
LIN54-210ENST00000510877 TRIM62Q9BVG3 475 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 NXF3Q9H4D5 531 aaKnown RBP13.31□□□□□ -0.28
LIN54-210ENST00000510877 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.31□□□□□ -0.28
LIN54-210ENST00000510877 CXXC1Q9P0U4 656 aaPredicted RBP13.31□□□□□ -0.28
LIN54-210ENST00000510877 FNDC3AQ9Y2H6 1198 aaKnown RBP13.31□□□□□ -0.28
LIN54-210ENST00000510877 MAFBQ9Y5Q3 323 aaPredicted RBP13.31□□□□□ -0.28
LIN54-210ENST00000510877 ZNF500O60304 480 aaPredicted RBP13.31□□□□□ -0.28
LIN54-210ENST00000510877 PTPN2P17706 415 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 ARF4P18085 180 aaPredicted RBP13.31□□□□□ -0.28
LIN54-210ENST00000510877 GLRA2P23416 452 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 C10orf120Q5SQS8 335 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 OR6B2Q6IFH4 312 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms