RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 C2orf71A6NGG8 1288 aa21.88■■□□□ 1.09
HOXC6-204ENST00000509328 HIDE1A8MVS5 230 aa21.88■■□□□ 1.09
HOXC6-204ENST00000509328 HYAL1Q12794 435 aa21.88■■□□□ 1.09
HOXC6-204ENST00000509328 USP41Q3LFD5 358 aa21.88■■□□□ 1.09
HOXC6-204ENST00000509328 CD300LGQ6UXG3 332 aa21.88■■□□□ 1.09
HOXC6-204ENST00000509328 TAS1R1Q7RTX1 841 aa21.88■■□□□ 1.09
HOXC6-204ENST00000509328 CBWD2Q8IUF1 395 aa21.88■■□□□ 1.09
HOXC6-204ENST00000509328 MRPL17Q9NRX2 175 aaKnown RBP21.88■■□□□ 1.09
HOXC6-204ENST00000509328 TRAF3IP3Q9Y228 551 aa21.88■■□□□ 1.09
HOXC6-204ENST00000509328 SSX2IPQ9Y2D8 614 aa21.88■■□□□ 1.09
HOXC6-204ENST00000509328 FSD2A1L4K1 749 aa21.87■■□□□ 1.09
HOXC6-204ENST00000509328 TRAPPC3O43617 180 aa21.87■■□□□ 1.09
HOXC6-204ENST00000509328 CALUO43852 315 aaPredicted RBP21.87■■□□□ 1.09
HOXC6-204ENST00000509328 URODP06132 367 aa21.87■■□□□ 1.09
HOXC6-204ENST00000509328 CA8P35219 290 aa21.87■■□□□ 1.09
HOXC6-204ENST00000509328 NRIP1P48552 1158 aa21.87■■□□□ 1.09
HOXC6-204ENST00000509328 GLUD2P49448 558 aa21.87■■□□□ 1.09
HOXC6-204ENST00000509328 SURF1Q15526 300 aa21.87■■□□□ 1.09
HOXC6-204ENST00000509328 PTPN14Q15678 1187 aa21.87■■□□□ 1.09
HOXC6-204ENST00000509328 SNRNP35Q16560 246 aaKnown RBP21.87■■□□□ 1.09
HOXC6-204ENST00000509328 COBLL1Q53SF7 1204 aa21.87■■□□□ 1.09
HOXC6-204ENST00000509328 KIAA1841Q6NSI8 718 aa21.87■■□□□ 1.09
HOXC6-204ENST00000509328 RBM23Q86U06 439 aaKnown RBP21.87■■□□□ 1.09
HOXC6-204ENST00000509328 SLC9A9Q8IVB4 645 aa21.87■■□□□ 1.09
HOXC6-204ENST00000509328 SMYD4Q8IYR2 804 aaPredicted RBP21.87■■□□□ 1.09
HOXC6-204ENST00000509328 C3orf58Q8NDZ4 430 aa21.87■■□□□ 1.09
HOXC6-204ENST00000509328 AUTS2Q8WXX7 1259 aa21.87■■□□□ 1.09
HOXC6-204ENST00000509328 CDCA3Q99618 268 aaPredicted RBP21.87■■□□□ 1.09
HOXC6-204ENST00000509328 CHST7Q9NS84 486 aa21.87■■□□□ 1.09
HOXC6-204ENST00000509328 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.86■■□□□ 1.09
HOXC6-204ENST00000509328 EXOC3O60645 756 aa21.86■■□□□ 1.09
HOXC6-204ENST00000509328 WNT7BP56706 349 aa21.86■■□□□ 1.09
HOXC6-204ENST00000509328 DSG1Q02413 1049 aa21.86■■□□□ 1.09
HOXC6-204ENST00000509328 MYBPC2Q14324 1141 aa21.86■■□□□ 1.09
HOXC6-204ENST00000509328 COL19A1Q14993 1142 aa21.86■■□□□ 1.09
HOXC6-204ENST00000509328 DUSP6Q16828 381 aa21.86■■□□□ 1.09
HOXC6-204ENST00000509328 KIAA0319Q5VV43 1072 aa21.86■■□□□ 1.09
HOXC6-204ENST00000509328 EFCAB13Q8IY85 973 aa21.86■■□□□ 1.09
HOXC6-204ENST00000509328 GPR65Q8IYL9 337 aa21.86■■□□□ 1.09
HOXC6-204ENST00000509328 IGFLR1Q9H665 355 aa21.86■■□□□ 1.09
HOXC6-204ENST00000509328 PDE11AQ9HCR9 933 aa21.86■■□□□ 1.09
HOXC6-204ENST00000509328 DMAC2Q9NW81 257 aa21.86■■□□□ 1.09
HOXC6-204ENST00000509328 MAN1B1Q9UKM7 699 aa21.86■■□□□ 1.09
HOXC6-204ENST00000509328 COG5Q9UP83 839 aa21.86■■□□□ 1.09
HOXC6-204ENST00000509328 PRUNE2Q8WUY3 3088 aa21.86■■□□□ 1.09
HOXC6-204ENST00000509328 SCN1AP35498 2009 aa21.85■■□□□ 1.09
HOXC6-204ENST00000509328 TULP1O00294 542 aaPredicted RBP21.85■■□□□ 1.09
HOXC6-204ENST00000509328 PER2O15055 1255 aa21.85■■□□□ 1.09
HOXC6-204ENST00000509328 LILRB3O75022 631 aa21.85■■□□□ 1.09
HOXC6-204ENST00000509328 NR3C1P04150 777 aa21.85■■□□□ 1.09
HOXC6-204ENST00000509328 IGFBP6P24592 240 aaPredicted RBP21.85■■□□□ 1.09
HOXC6-204ENST00000509328 GTF2F1P35269 517 aaKnown RBP eCLIP21.85■■□□□ 1.094e-7■■■■■ 30.9
HOXC6-204ENST00000509328 PRCPP42785 496 aa21.85■■□□□ 1.09
HOXC6-204ENST00000509328 GUCY2FP51841 1108 aa21.85■■□□□ 1.09
HOXC6-204ENST00000509328 NFIL3Q16649 462 aa21.85■■□□□ 1.09
HOXC6-204ENST00000509328 FAM171A1Q5VUB5 890 aa21.85■■□□□ 1.09
HOXC6-204ENST00000509328 EFHBQ8N7U6 833 aa21.85■■□□□ 1.09
HOXC6-204ENST00000509328 RDH13Q8NBN7 331 aa21.85■■□□□ 1.09
HOXC6-204ENST00000509328 CACTINQ8WUQ7 758 aaKnown RBP21.85■■□□□ 1.09
HOXC6-204ENST00000509328 HLA-CQ95604 372 aa21.85■■□□□ 1.09
HOXC6-204ENST00000509328 PABPC5Q96DU9 382 aaKnown RBP21.85■■□□□ 1.09
HOXC6-204ENST00000509328 TTPALQ9BTX7 342 aa21.85■■□□□ 1.09
HOXC6-204ENST00000509328 DPP3Q9NY33 737 aa21.85■■□□□ 1.09
HOXC6-204ENST00000509328 NUB1Q9Y5A7 615 aa21.85■■□□□ 1.09
HOXC6-204ENST00000509328 BRWD1Q9NSI6 2320 aa21.85■■□□□ 1.09
HOXC6-204ENST00000509328 C2CD2LO14523 706 aa21.84■■□□□ 1.09
HOXC6-204ENST00000509328 BRCC3P46736 316 aa21.84■■□□□ 1.09
HOXC6-204ENST00000509328 TFAMQ00059 246 aaKnown RBP21.84■■□□□ 1.09
HOXC6-204ENST00000509328 CYP24A1Q07973 514 aa21.84■■□□□ 1.09
HOXC6-204ENST00000509328 CAMK4Q16566 473 aa21.84■■□□□ 1.09
HOXC6-204ENST00000509328 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.84■■□□□ 1.09
HOXC6-204ENST00000509328 TMEM130Q8N3G9 435 aa21.84■■□□□ 1.09
HOXC6-204ENST00000509328 B3GALT6Q96L58 329 aa21.84■■□□□ 1.09
HOXC6-204ENST00000509328 EMILIN2Q9BXX0 1053 aa21.84■■□□□ 1.09
HOXC6-204ENST00000509328 CLSTN2Q9H4D0 955 aa21.84■■□□□ 1.09
HOXC6-204ENST00000509328 PRDM6Q9NQX0 595 aa21.84■■□□□ 1.09
HOXC6-204ENST00000509328 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.83■■□□□ 1.09
HOXC6-204ENST00000509328 CLASP2O75122 1294 aaKnown RBP21.83■■□□□ 1.09
HOXC6-204ENST00000509328 FGFR3P22607 806 aa21.83■■□□□ 1.09
HOXC6-204ENST00000509328 MCM4P33991 863 aa21.83■■□□□ 1.09
HOXC6-204ENST00000509328 CREMQ03060 361 aa21.83■■□□□ 1.09
HOXC6-204ENST00000509328 ADAM15Q13444 863 aa21.83■■□□□ 1.09
HOXC6-204ENST00000509328 STIM1Q13586 685 aa21.83■■□□□ 1.09
HOXC6-204ENST00000509328 MORC3Q14149 939 aa21.83■■□□□ 1.09
HOXC6-204ENST00000509328 PSMD6Q15008 389 aa21.83■■□□□ 1.09
HOXC6-204ENST00000509328 CTC1Q2NKJ3 1217 aa21.83■■□□□ 1.09
HOXC6-204ENST00000509328 C9orf57Q5W0N0 161 aa21.83■■□□□ 1.09
HOXC6-204ENST00000509328 ISM2Q6H9L7 571 aa21.83■■□□□ 1.09
HOXC6-204ENST00000509328 CEP57Q86XR8 500 aa21.83■■□□□ 1.09
HOXC6-204ENST00000509328 RIN2Q8WYP3 895 aaPredicted RBP21.83■■□□□ 1.09
HOXC6-204ENST00000509328 MFSD14AQ96MC6 490 aa21.83■■□□□ 1.09
HOXC6-204ENST00000509328 UBE2ZQ9H832 354 aaPredicted RBP21.83■■□□□ 1.09
HOXC6-204ENST00000509328 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.83■■□□□ 1.09
HOXC6-204ENST00000509328 CLDND1Q9NY35 253 aa21.83■■□□□ 1.09
HOXC6-204ENST00000509328 KIAA1468Q9P260 1216 aa21.83■■□□□ 1.09
HOXC6-204ENST00000509328 THEGQ9P2T0 379 aa21.83■■□□□ 1.09
HOXC6-204ENST00000509328 ANO9A1A5B4 782 aa21.82■■□□□ 1.08
HOXC6-204ENST00000509328 I3L4J1 428 aa21.82■■□□□ 1.08
HOXC6-204ENST00000509328 PIRO00625 290 aa21.82■■□□□ 1.08
HOXC6-204ENST00000509328 PAX3P23760 479 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms