RNA–Protein interactions for RNA: ENST00000509317.5

COPS4-207, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-207ENST00000509317 ELAVL2Q12926 359 aaKnown RBP11.25□□□□□ -0.61
COPS4-207ENST00000509317 PRPF4BQ13523 1007 aaKnown RBP11.25□□□□□ -0.61
COPS4-207ENST00000509317 SF3A2Q15428 464 aaKnown RBP11.25□□□□□ -0.61
COPS4-207ENST00000509317 UVSSAQ2YD98 709 aa11.25□□□□□ -0.61
COPS4-207ENST00000509317 GALNT17Q6IS24 598 aa11.25□□□□□ -0.61
COPS4-207ENST00000509317 RUFY3Q7L099 469 aa11.25□□□□□ -0.61
COPS4-207ENST00000509317 CELF5Q8N6W0 485 aaKnown RBP11.25□□□□□ -0.61
COPS4-207ENST00000509317 DNASE1L2Q92874 299 aa11.25□□□□□ -0.61
COPS4-207ENST00000509317 ASB16Q96NS5 453 aa11.25□□□□□ -0.61
COPS4-207ENST00000509317 TRMT61BQ9BVS5 477 aaKnown RBP11.25□□□□□ -0.61
COPS4-207ENST00000509317 FAM126AQ9BYI3 521 aaPredicted RBP11.25□□□□□ -0.61
COPS4-207ENST00000509317 SMOC1Q9H4F8 434 aa11.25□□□□□ -0.61
COPS4-207ENST00000509317 CYP4F11Q9HBI6 524 aa11.25□□□□□ -0.61
COPS4-207ENST00000509317 ZFP14Q9HCL3 533 aa11.25□□□□□ -0.61
COPS4-207ENST00000509317 ANKEF1Q9NU02 776 aa11.25□□□□□ -0.61
COPS4-207ENST00000509317 SLC38A8A6NNN8 435 aa11.24□□□□□ -0.61
COPS4-207ENST00000509317 N4BP3O15049 544 aa11.24□□□□□ -0.61
COPS4-207ENST00000509317 LYPLA2O95372 231 aa11.24□□□□□ -0.61
COPS4-207ENST00000509317 CHRNB1P11230 501 aa11.24□□□□□ -0.61
COPS4-207ENST00000509317 TXKP42681 527 aa11.24□□□□□ -0.61
COPS4-207ENST00000509317 CXCL12P48061 93 aa11.24□□□□□ -0.61
COPS4-207ENST00000509317 OSTNP61366 133 aa11.24□□□□□ -0.61
COPS4-207ENST00000509317 SCRN1Q12765 414 aa11.24□□□□□ -0.61
COPS4-207ENST00000509317 UPP1Q16831 310 aa11.24□□□□□ -0.61
COPS4-207ENST00000509317 N4BP2L1Q5TBK1 243 aaPredicted RBP11.24□□□□□ -0.61
COPS4-207ENST00000509317 CDCA2Q69YH5 1023 aaPredicted RBP11.24□□□□□ -0.61
COPS4-207ENST00000509317 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.24□□□□□ -0.61
COPS4-207ENST00000509317 MAP4K3Q8IVH8 894 aa11.24□□□□□ -0.61
COPS4-207ENST00000509317 CEP120Q8N960 986 aa11.24□□□□□ -0.61
COPS4-207ENST00000509317 BORCS6Q96GS4 357 aa11.24□□□□□ -0.61
COPS4-207ENST00000509317 PPP1R10Q96QC0 940 aaKnown RBP11.24□□□□□ -0.61
COPS4-207ENST00000509317 TTC12Q9H892 705 aaPredicted RBP11.24□□□□□ -0.61
COPS4-207ENST00000509317 PRMT7Q9NVM4 692 aaPredicted RBP11.24□□□□□ -0.61
COPS4-207ENST00000509317 CEP72Q9P209 647 aa11.24□□□□□ -0.61
COPS4-207ENST00000509317 BACE2Q9Y5Z0 518 aa11.24□□□□□ -0.61
COPS4-207ENST00000509317 ZMYM2Q9UBW7 1377 aa11.24□□□□□ -0.61
COPS4-207ENST00000509317 LAMA1P25391 3075 aa11.24□□□□□ -0.61
COPS4-207ENST00000509317 CNOT1A5YKK6 2376 aaKnown RBP11.24□□□□□ -0.61
COPS4-207ENST00000509317 BAHCC1Q9P281 2608 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 ARHGEF37A1IGU5 675 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 K7ESF4 209 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 MAN2B1O00754 1011 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 BAG4O95429 457 aaKnown RBP11.23□□□□□ -0.61
COPS4-207ENST00000509317 SPATA31C1P0DKV0 1188 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 MYL4P12829 197 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 HOXB3P14651 431 aaPredicted RBP11.23□□□□□ -0.61
COPS4-207ENST00000509317 ATP2B1P20020 1258 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 PSMA5P28066 241 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 PXNP49023 591 aaPredicted RBP11.23□□□□□ -0.61
COPS4-207ENST00000509317 CCR3P51677 355 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 NRLP54845 237 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 TEAD2Q15562 447 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 CSRP2Q16527 193 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 CALCRLQ16602 461 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 FAM187BQ17R55 369 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 NT5DC1Q5TFE4 455 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 PDXDC1Q6P996 788 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 TXNDC11Q6PKC3 985 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 ANKS3Q6ZW76 656 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 PDZD4Q76G19 769 aaPredicted RBP11.23□□□□□ -0.61
COPS4-207ENST00000509317 ZBTB8OSQ8IWT0 167 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 SLFN12Q8IYM2 578 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 FAM160A2Q8N612 972 aaPredicted RBP11.23□□□□□ -0.61
COPS4-207ENST00000509317 ZSCAN18Q8TBC5 510 aaPredicted RBP11.23□□□□□ -0.61
COPS4-207ENST00000509317 SMARCD2Q92925 531 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 ZFYVE19Q96K21 471 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 CCDC113Q9H0I3 377 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 ZSWIM6Q9HCJ5 1215 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 POLR3BQ9NW08 1133 aaPredicted RBP11.23□□□□□ -0.61
COPS4-207ENST00000509317 PCDHA12Q9UN75 941 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 INSL5Q9Y5Q6 135 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 COL4A2P08572 1712 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 ATRXP46100 2492 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 ZFYVE26Q68DK2 2539 aa11.23□□□□□ -0.61
COPS4-207ENST00000509317 SMIM28A0A1B0GU29 152 aa11.22□□□□□ -0.61
COPS4-207ENST00000509317 HEPACAM2A8MVW5 462 aa11.22□□□□□ -0.61
COPS4-207ENST00000509317 TMEM189-UBE2V1I3L0A0 370 aa11.22□□□□□ -0.61
COPS4-207ENST00000509317 ARNTLO00327 626 aa11.22□□□□□ -0.61
COPS4-207ENST00000509317 AXIN1O15169 862 aa11.22□□□□□ -0.61
COPS4-207ENST00000509317 MED24O75448 989 aa11.22□□□□□ -0.61
COPS4-207ENST00000509317 ABLIM3O94929 683 aa11.22□□□□□ -0.61
COPS4-207ENST00000509317 CTDNEP1O95476 244 aa11.22□□□□□ -0.61
COPS4-207ENST00000509317 PSMC3P17980 439 aa11.22□□□□□ -0.61
COPS4-207ENST00000509317 ELF1P32519 619 aa11.22□□□□□ -0.61
COPS4-207ENST00000509317 CDR1P51861 262 aa11.22□□□□□ -0.61
COPS4-207ENST00000509317 TWF1Q12792 350 aa11.22□□□□□ -0.61
COPS4-207ENST00000509317 MAPK6Q16659 721 aa11.22□□□□□ -0.61
COPS4-207ENST00000509317 STXBP5Q5T5C0 1151 aa11.22□□□□□ -0.61
COPS4-207ENST00000509317 SLC8B1Q6J4K2 584 aa11.22□□□□□ -0.61
COPS4-207ENST00000509317 SDK1Q7Z5N4 2213 aa11.22□□□□□ -0.61
COPS4-207ENST00000509317 ZNF461Q8TAF7 563 aa11.22□□□□□ -0.61
COPS4-207ENST00000509317 IRF7Q92985 503 aa11.22□□□□□ -0.61
COPS4-207ENST00000509317 TNFRSF25Q93038 417 aa11.22□□□□□ -0.61
COPS4-207ENST00000509317 C18orf25Q96B23 403 aaPredicted RBP11.22□□□□□ -0.61
COPS4-207ENST00000509317 ZNF274Q96GC6 653 aaPredicted RBP11.22□□□□□ -0.61
COPS4-207ENST00000509317 PRIMPOLQ96LW4 560 aa11.22□□□□□ -0.61
COPS4-207ENST00000509317 ZMAT2Q96NC0 199 aaKnown RBP11.22□□□□□ -0.61
COPS4-207ENST00000509317 LRRC3BQ96PB8 259 aa11.22□□□□□ -0.61
COPS4-207ENST00000509317 TMEM60Q9H2L4 133 aa11.22□□□□□ -0.61
COPS4-207ENST00000509317 AVENQ9NQS1 362 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms