RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 WDR27A2RRH5 827 aa17.59■□□□□ 0.41
CXCL1-202ENST00000509101 ARHGEF35A5YM69 484 aa17.59■□□□□ 0.41
CXCL1-202ENST00000509101 TRAPPC3O43617 180 aa17.59■□□□□ 0.41
CXCL1-202ENST00000509101 PTPN2P17706 415 aa17.59■□□□□ 0.41
CXCL1-202ENST00000509101 TGM1P22735 817 aa17.59■□□□□ 0.41
CXCL1-202ENST00000509101 ELF1P32519 619 aa17.59■□□□□ 0.41
CXCL1-202ENST00000509101 ARPP19P56211 112 aa17.59■□□□□ 0.41
CXCL1-202ENST00000509101 PRSS36Q5K4E3 855 aa17.59■□□□□ 0.41
CXCL1-202ENST00000509101 ATF7IP2Q5U623 682 aa17.59■□□□□ 0.41
CXCL1-202ENST00000509101 PADI6Q6TGC4 694 aa17.59■□□□□ 0.41
CXCL1-202ENST00000509101 NACC1Q96RE7 527 aa17.59■□□□□ 0.41
CXCL1-202ENST00000509101 RTKNQ9BST9 563 aa17.59■□□□□ 0.41
CXCL1-202ENST00000509101 FAM126AQ9BYI3 521 aaPredicted RBP17.59■□□□□ 0.41
CXCL1-202ENST00000509101 CHRDQ9H2X0 955 aa17.59■□□□□ 0.41
CXCL1-202ENST00000509101 RAB23Q9ULC3 237 aa17.59■□□□□ 0.41
CXCL1-202ENST00000509101 NRG2O14511 850 aaPredicted RBP17.58■□□□□ 0.4
CXCL1-202ENST00000509101 TDGF1P13385 188 aa17.58■□□□□ 0.4
CXCL1-202ENST00000509101 CYP11B2P19099 503 aa17.58■□□□□ 0.4
CXCL1-202ENST00000509101 MCM7P33993 719 aa17.58■□□□□ 0.4
CXCL1-202ENST00000509101 SOX4Q06945 474 aaPredicted RBP17.58■□□□□ 0.4
CXCL1-202ENST00000509101 SPEM2Q0P670 501 aa17.58■□□□□ 0.4
CXCL1-202ENST00000509101 PPP2R5AQ15172 486 aa17.58■□□□□ 0.4
CXCL1-202ENST00000509101 FAM78AQ5JUQ0 283 aa17.58■□□□□ 0.4
CXCL1-202ENST00000509101 NT5DC1Q5TFE4 455 aa17.58■□□□□ 0.4
CXCL1-202ENST00000509101 SLC8B1Q6J4K2 584 aa17.58■□□□□ 0.4
CXCL1-202ENST00000509101 ZNF687Q8N1G0 1237 aa17.58■□□□□ 0.4
CXCL1-202ENST00000509101 CEP120Q8N960 986 aa17.58■□□□□ 0.4
CXCL1-202ENST00000509101 NECAB1Q8N987 351 aa17.58■□□□□ 0.4
CXCL1-202ENST00000509101 ZNF461Q8TAF7 563 aa17.58■□□□□ 0.4
CXCL1-202ENST00000509101 CYP4F11Q9HBI6 524 aa17.58■□□□□ 0.4
CXCL1-202ENST00000509101 ZFP14Q9HCL3 533 aa17.58■□□□□ 0.4
CXCL1-202ENST00000509101 POLD4Q9HCU8 107 aa17.58■□□□□ 0.4
CXCL1-202ENST00000509101 MAN2B1O00754 1011 aa17.57■□□□□ 0.4
CXCL1-202ENST00000509101 LARGE1O95461 756 aa17.57■□□□□ 0.4
CXCL1-202ENST00000509101 CCR2P41597 374 aa17.57■□□□□ 0.4
CXCL1-202ENST00000509101 PDZD4Q76G19 769 aaPredicted RBP17.57■□□□□ 0.4
CXCL1-202ENST00000509101 POLR3CQ9BUI4 534 aaPredicted RBP17.57■□□□□ 0.4
CXCL1-202ENST00000509101 TRMT61BQ9BVS5 477 aaKnown RBP17.57■□□□□ 0.4
CXCL1-202ENST00000509101 INSL5Q9Y5Q6 135 aa17.57■□□□□ 0.4
CXCL1-202ENST00000509101 SMIM28A0A1B0GU29 152 aa17.56■□□□□ 0.4
CXCL1-202ENST00000509101 PODXLO00592 558 aa17.56■□□□□ 0.4
CXCL1-202ENST00000509101 ZNF197O14709 1029 aa17.56■□□□□ 0.4
CXCL1-202ENST00000509101 ABLIM3O94929 683 aa17.56■□□□□ 0.4
CXCL1-202ENST00000509101 SEC24AO95486 1093 aa17.56■□□□□ 0.4
CXCL1-202ENST00000509101 GDI1P31150 447 aa17.56■□□□□ 0.4
CXCL1-202ENST00000509101 OSTNP61366 133 aa17.56■□□□□ 0.4
CXCL1-202ENST00000509101 VITQ6UXI7 678 aa17.56■□□□□ 0.4
CXCL1-202ENST00000509101 PRR23BQ6ZRT6 265 aa17.56■□□□□ 0.4
CXCL1-202ENST00000509101 APBB1IPQ7Z5R6 666 aaPredicted RBP17.56■□□□□ 0.4
CXCL1-202ENST00000509101 IRF7Q92985 503 aa17.56■□□□□ 0.4
CXCL1-202ENST00000509101 IFT74Q96LB3 600 aa17.56■□□□□ 0.4
CXCL1-202ENST00000509101 ASB16Q96NS5 453 aa17.56■□□□□ 0.4
CXCL1-202ENST00000509101 ZNF334Q9HCZ1 680 aaPredicted RBP17.56■□□□□ 0.4
CXCL1-202ENST00000509101 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.56■□□□□ 0.4
CXCL1-202ENST00000509101 PIAS3Q9Y6X2 628 aa17.56■□□□□ 0.4
CXCL1-202ENST00000509101 KIF26AQ9ULI4 1882 aaPredicted RBP17.56■□□□□ 0.4
CXCL1-202ENST00000509101 NCANO14594 1321 aa17.55■□□□□ 0.4
CXCL1-202ENST00000509101 NUP210Q8TEM1 1887 aaPredicted RBP17.55■□□□□ 0.4
CXCL1-202ENST00000509101 ATF2P15336 505 aa17.55■□□□□ 0.4
CXCL1-202ENST00000509101 RPA1P27694 616 aa17.55■□□□□ 0.4
CXCL1-202ENST00000509101 CCR3P51677 355 aa17.55■□□□□ 0.4
CXCL1-202ENST00000509101 EFNA5P52803 228 aa17.55■□□□□ 0.4
CXCL1-202ENST00000509101 YARSP54577 528 aaKnown RBP17.55■□□□□ 0.4
CXCL1-202ENST00000509101 NRLP54845 237 aa17.55■□□□□ 0.4
CXCL1-202ENST00000509101 TRIM29Q14134 588 aa17.55■□□□□ 0.4
CXCL1-202ENST00000509101 PPP2R5DQ14738 602 aa17.55■□□□□ 0.4
CXCL1-202ENST00000509101 ZNF568Q3ZCX4 644 aa17.55■□□□□ 0.4
CXCL1-202ENST00000509101 LAIR1Q6GTX8 287 aa17.55■□□□□ 0.4
CXCL1-202ENST00000509101 TCEAL8Q8IYN2 117 aa17.55■□□□□ 0.4
CXCL1-202ENST00000509101 HS6ST3Q8IZP7 471 aa17.55■□□□□ 0.4
CXCL1-202ENST00000509101 ELMOD1Q8N336 334 aa17.55■□□□□ 0.4
CXCL1-202ENST00000509101 NSUN7Q8NE18 718 aaKnown RBP17.55■□□□□ 0.4
CXCL1-202ENST00000509101 ERMNQ8TAM6 284 aa17.55■□□□□ 0.4
CXCL1-202ENST00000509101 FAM3CQ92520 227 aa17.55■□□□□ 0.4
CXCL1-202ENST00000509101 GTF3C6Q969F1 213 aa17.55■□□□□ 0.4
CXCL1-202ENST00000509101 IER2Q9BTL4 223 aa17.55■□□□□ 0.4
CXCL1-202ENST00000509101 CCDC94Q9BW85 323 aaPredicted RBP17.55■□□□□ 0.4
CXCL1-202ENST00000509101 CDT1Q9H211 546 aa17.55■□□□□ 0.4
CXCL1-202ENST00000509101 LMAN1LQ9HAT1 526 aa17.55■□□□□ 0.4
CXCL1-202ENST00000509101 TOPORSQ9NS56 1045 aaPredicted RBP17.55■□□□□ 0.4
CXCL1-202ENST00000509101 USP24Q9UPU5 2620 aa17.55■□□□□ 0.4
CXCL1-202ENST00000509101 ZFHX4Q86UP3 3567 aa17.55■□□□□ 0.4
CXCL1-202ENST00000509101 MYH11P35749 1972 aa17.55■□□□□ 0.4
CXCL1-202ENST00000509101 PHLPP2Q6ZVD8 1323 aa17.54■□□□□ 0.4
CXCL1-202ENST00000509101 JAK2O60674 1132 aa17.54■□□□□ 0.4
CXCL1-202ENST00000509101 GJA1P17302 382 aa17.54■□□□□ 0.4
CXCL1-202ENST00000509101 PSMC3P17980 439 aa17.54■□□□□ 0.4
CXCL1-202ENST00000509101 GRM5P41594 1212 aa17.54■□□□□ 0.4
CXCL1-202ENST00000509101 ANKRD1Q15327 319 aa17.54■□□□□ 0.4
CXCL1-202ENST00000509101 MAP4K3Q8IVH8 894 aa17.54■□□□□ 0.4
CXCL1-202ENST00000509101 SMARCD2Q92925 531 aa17.54■□□□□ 0.4
CXCL1-202ENST00000509101 ZSWIM3Q96MP5 696 aa17.54■□□□□ 0.4
CXCL1-202ENST00000509101 ZMAT2Q96NC0 199 aaKnown RBP17.54■□□□□ 0.4
CXCL1-202ENST00000509101 SLC38A7Q9NVC3 462 aa17.54■□□□□ 0.4
CXCL1-202ENST00000509101 FBXL5Q9UKA1 691 aa17.54■□□□□ 0.4
CXCL1-202ENST00000509101 TNFSF13BQ9Y275 285 aa17.54■□□□□ 0.4
CXCL1-202ENST00000509101 NUB1Q9Y5A7 615 aa17.54■□□□□ 0.4
CXCL1-202ENST00000509101 H7C4K7 107 aa17.53■□□□□ 0.4
CXCL1-202ENST00000509101 SYN3O14994 580 aa17.53■□□□□ 0.4
CXCL1-202ENST00000509101 MICAL2O94851 1124 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms