RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 ADSSP30520 456 aa9.46□□□□□ -0.9
SNCA-211ENST00000508895 HOXD13P35453 343 aa9.46□□□□□ -0.9
SNCA-211ENST00000508895 GLUD2P49448 558 aa9.46□□□□□ -0.9
SNCA-211ENST00000508895 ASIC1P78348 528 aa9.46□□□□□ -0.9
SNCA-211ENST00000508895 CBX2Q14781 532 aaPredicted RBP9.46□□□□□ -0.9
SNCA-211ENST00000508895 ENOX2Q16206 610 aaKnown RBP9.46□□□□□ -0.9
SNCA-211ENST00000508895 UPP1Q16831 310 aa9.46□□□□□ -0.9
SNCA-211ENST00000508895 PUS10Q3MIT2 529 aaKnown RBP9.46□□□□□ -0.9
SNCA-211ENST00000508895 FAM171A1Q5VUB5 890 aa9.46□□□□□ -0.9
SNCA-211ENST00000508895 LILRA6Q6PI73 481 aa9.46□□□□□ -0.9
SNCA-211ENST00000508895 CRELD2Q6UXH1 353 aaPredicted RBP9.46□□□□□ -0.9
SNCA-211ENST00000508895 KRBA2Q6ZNG9 492 aa9.46□□□□□ -0.9
SNCA-211ENST00000508895 PALB2Q86YC2 1186 aa9.46□□□□□ -0.9
SNCA-211ENST00000508895 CEP57L1Q8IYX8 460 aa9.46□□□□□ -0.9
SNCA-211ENST00000508895 LNX1Q8TBB1 728 aaPredicted RBP9.46□□□□□ -0.9
SNCA-211ENST00000508895 ZNF707Q96C28 371 aaPredicted RBP9.46□□□□□ -0.9
SNCA-211ENST00000508895 FBXL18Q96ME1 805 aa9.46□□□□□ -0.9
SNCA-211ENST00000508895 C7orf25Q9BPX7 421 aa9.46□□□□□ -0.9
SNCA-211ENST00000508895 ADPGKQ9BRR6 497 aa9.46□□□□□ -0.9
SNCA-211ENST00000508895 COLEC11Q9BWP8 271 aa9.46□□□□□ -0.9
SNCA-211ENST00000508895 OLFML3Q9NRN5 406 aa9.46□□□□□ -0.9
SNCA-211ENST00000508895 CNTN3Q9P232 1028 aa9.46□□□□□ -0.9
SNCA-211ENST00000508895 LARSQ9P2J5 1176 aaKnown RBP9.46□□□□□ -0.9
SNCA-211ENST00000508895 ZMYM2Q9UBW7 1377 aa9.46□□□□□ -0.9
SNCA-211ENST00000508895 COL4A3Q01955 1670 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 TTC26A0AVF1 554 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 TGM5O43548 720 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 TRAK2O60296 914 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 TADA2AO75478 443 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 TOM1L1O75674 476 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 URODP06132 367 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 KCNE1P15382 129 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 GAP43P17677 238 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 FGFR3P22607 806 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 CDR1P51861 262 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 UBE2HP62256 183 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 GTF2BQ00403 316 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 NOLC1Q14978 699 aaKnown RBP eCLIP9.45□□□□□ -0.9
SNCA-211ENST00000508895 ZBTB6Q15916 424 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 ZPBP2Q6X784 338 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 UNC13DQ70J99 1090 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 ZNF720Q7Z2F6 126 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 CEP57Q86XR8 500 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 MAP4K3Q8IVH8 894 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 RSPH1Q8WYR4 309 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 CASP10Q92851 521 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 PPP2R3CQ969Q6 453 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 DDX27Q96GQ7 796 aaKnown RBP9.45□□□□□ -0.9
SNCA-211ENST00000508895 ACAP3Q96P50 834 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 GBP4Q96PP9 640 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 TCHPQ9BT92 498 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 PHF7Q9BWX1 381 aaPredicted RBP9.45□□□□□ -0.9
SNCA-211ENST00000508895 ADAM7Q9H2U9 754 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 ST6GALNAC4Q9H4F1 302 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 MAN1C1Q9NR34 630 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 MRPL17Q9NRX2 175 aaKnown RBP9.45□□□□□ -0.9
SNCA-211ENST00000508895 LMBRD1Q9NUN5 540 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 PANK4Q9NVE7 773 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 SEL1LQ9UBV2 794 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 PRKAG3Q9UGI9 489 aa9.45□□□□□ -0.9
SNCA-211ENST00000508895 A0A0B4J269 797 aa9.44□□□□□ -0.9
SNCA-211ENST00000508895 TMEM189-UBE2V1I3L0A0 370 aa9.44□□□□□ -0.9
SNCA-211ENST00000508895 PODXLO00592 558 aa9.44□□□□□ -0.9
SNCA-211ENST00000508895 SPTLC1O15269 473 aa9.44□□□□□ -0.9
SNCA-211ENST00000508895 PRPF40AO75400 957 aaKnown RBP9.44□□□□□ -0.9
SNCA-211ENST00000508895 B3GAT3O94766 335 aa9.44□□□□□ -0.9
SNCA-211ENST00000508895 VNN2O95498 520 aa9.44□□□□□ -0.9
SNCA-211ENST00000508895 ASGR2P07307 311 aa9.44□□□□□ -0.9
SNCA-211ENST00000508895 ADRB2P07550 413 aa9.44□□□□□ -0.9
SNCA-211ENST00000508895 ACOT2P49753 483 aa9.44□□□□□ -0.9
SNCA-211ENST00000508895 SMTNP53814 917 aa9.44□□□□□ -0.9
SNCA-211ENST00000508895 NTHL1P78549 312 aa9.44□□□□□ -0.9
SNCA-211ENST00000508895 AMPD3Q01432 767 aa9.44□□□□□ -0.9
SNCA-211ENST00000508895 DPYDQ12882 1025 aa9.44□□□□□ -0.9
SNCA-211ENST00000508895 USP41Q3LFD5 358 aa9.44□□□□□ -0.9
SNCA-211ENST00000508895 HACE1Q8IYU2 909 aa9.44□□□□□ -0.9
SNCA-211ENST00000508895 PIK3R5Q8WYR1 880 aa9.44□□□□□ -0.9
SNCA-211ENST00000508895 CCDC94Q9BW85 323 aaPredicted RBP9.44□□□□□ -0.9
SNCA-211ENST00000508895 LRRC27Q9C0I9 530 aa9.44□□□□□ -0.9
SNCA-211ENST00000508895 STYXL1Q9Y6J8 313 aa9.44□□□□□ -0.9
SNCA-211ENST00000508895 PTPRDP23468 1912 aa9.44□□□□□ -0.9
SNCA-211ENST00000508895 MYH10P35580 1976 aa9.44□□□□□ -0.9
SNCA-211ENST00000508895 H0YCG3 227 aa9.43□□□□□ -0.9
SNCA-211ENST00000508895 OGTO15294 1046 aa9.43□□□□□ -0.9
SNCA-211ENST00000508895 CLDN3O15551 220 aa9.43□□□□□ -0.9
SNCA-211ENST00000508895 TBC1D4O60343 1298 aa9.43□□□□□ -0.9
SNCA-211ENST00000508895 PRPF6O94906 941 aaKnown RBP9.43□□□□□ -0.9
SNCA-211ENST00000508895 MYL1P05976 194 aa9.43□□□□□ -0.9
SNCA-211ENST00000508895 NFICP08651 508 aa9.43□□□□□ -0.9
SNCA-211ENST00000508895 LIG4P49917 911 aa9.43□□□□□ -0.9
SNCA-211ENST00000508895 STRN3Q13033 797 aa9.43□□□□□ -0.9
SNCA-211ENST00000508895 PNOCQ13519 176 aa9.43□□□□□ -0.9
SNCA-211ENST00000508895 POSTNQ15063 836 aa9.43□□□□□ -0.9
SNCA-211ENST00000508895 PSMD5Q16401 504 aa9.43□□□□□ -0.9
SNCA-211ENST00000508895 HERC4Q5GLZ8 1057 aaPredicted RBP9.43□□□□□ -0.9
SNCA-211ENST00000508895 TMEM31Q5JXX7 168 aa9.43□□□□□ -0.9
SNCA-211ENST00000508895 FAM26FQ5R3K3 315 aa9.43□□□□□ -0.9
SNCA-211ENST00000508895 JADE1Q6IE81 842 aa9.43□□□□□ -0.9
SNCA-211ENST00000508895 KIAA1841Q6NSI8 718 aa9.43□□□□□ -0.9
SNCA-211ENST00000508895 DCLRE1AQ6PJP8 1040 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms