RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 LIMK1P53667 647 aa10.38□□□□□ -0.75
NEDD9-211ENST00000508546 PRSS36Q5K4E3 855 aa10.38□□□□□ -0.75
NEDD9-211ENST00000508546 ANKS3Q6ZW76 656 aa10.38□□□□□ -0.75
NEDD9-211ENST00000508546 POTEDQ86YR6 584 aa10.38□□□□□ -0.75
NEDD9-211ENST00000508546 MAP4K3Q8IVH8 894 aa10.38□□□□□ -0.75
NEDD9-211ENST00000508546 IRF7Q92985 503 aa10.38□□□□□ -0.75
NEDD9-211ENST00000508546 AIFM3Q96NN9 605 aa10.38□□□□□ -0.75
NEDD9-211ENST00000508546 HSD17B14Q9BPX1 270 aa10.38□□□□□ -0.75
NEDD9-211ENST00000508546 EIF2AK1Q9BQI3 630 aaKnown RBP10.38□□□□□ -0.75
NEDD9-211ENST00000508546 FZD8Q9H461 694 aa10.38□□□□□ -0.75
NEDD9-211ENST00000508546 BRD9Q9H8M2 597 aa10.38□□□□□ -0.75
NEDD9-211ENST00000508546 ZFP14Q9HCL3 533 aa10.38□□□□□ -0.75
NEDD9-211ENST00000508546 CDY1Q9Y6F8 540 aa10.38□□□□□ -0.75
NEDD9-211ENST00000508546 ADAMTS20P59510 1910 aa10.38□□□□□ -0.75
NEDD9-211ENST00000508546 FREM2Q5SZK8 3169 aa10.38□□□□□ -0.75
NEDD9-211ENST00000508546 LRRIQ4A6NIV6 560 aa10.37□□□□□ -0.75
NEDD9-211ENST00000508546 ZNF197O14709 1029 aa10.37□□□□□ -0.75
NEDD9-211ENST00000508546 CPLX1O14810 134 aa10.37□□□□□ -0.75
NEDD9-211ENST00000508546 N4BP3O15049 544 aa10.37□□□□□ -0.75
NEDD9-211ENST00000508546 TOP3BO95985 862 aaKnown RBP10.37□□□□□ -0.75
NEDD9-211ENST00000508546 XRCC6P12956 609 aaKnown RBP eCLIP10.37□□□□□ -0.75
NEDD9-211ENST00000508546 CEBPBP17676 345 aa10.37□□□□□ -0.75
NEDD9-211ENST00000508546 CNR2P34972 360 aa10.37□□□□□ -0.75
NEDD9-211ENST00000508546 RARRES1P49788 294 aa10.37□□□□□ -0.75
NEDD9-211ENST00000508546 MLLT6P55198 1093 aaPredicted RBP10.37□□□□□ -0.75
NEDD9-211ENST00000508546 IRX6P78412 446 aaPredicted RBP10.37□□□□□ -0.75
NEDD9-211ENST00000508546 FOXC1Q12948 553 aa10.37□□□□□ -0.75
NEDD9-211ENST00000508546 TOB2Q14106 344 aaPredicted RBP10.37□□□□□ -0.75
NEDD9-211ENST00000508546 AASDHQ4L235 1098 aaPredicted RBP10.37□□□□□ -0.75
NEDD9-211ENST00000508546 CDCA2Q69YH5 1023 aaPredicted RBP10.37□□□□□ -0.75
NEDD9-211ENST00000508546 PSAPL1Q6NUJ1 521 aa10.37□□□□□ -0.75
NEDD9-211ENST00000508546 CPLX2Q6PUV4 134 aaKnown RBP10.37□□□□□ -0.75
NEDD9-211ENST00000508546 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.37□□□□□ -0.75
NEDD9-211ENST00000508546 ZNF461Q8TAF7 563 aa10.37□□□□□ -0.75
NEDD9-211ENST00000508546 FAM3CQ92520 227 aa10.37□□□□□ -0.75
NEDD9-211ENST00000508546 ZNF274Q96GC6 653 aaPredicted RBP10.37□□□□□ -0.75
NEDD9-211ENST00000508546 DDX27Q96GQ7 796 aaKnown RBP10.37□□□□□ -0.75
NEDD9-211ENST00000508546 ASB16Q96NS5 453 aa10.37□□□□□ -0.75
NEDD9-211ENST00000508546 TRMT61BQ9BVS5 477 aaKnown RBP10.37□□□□□ -0.75
NEDD9-211ENST00000508546 POLR3FQ9H1D9 316 aaPredicted RBP10.37□□□□□ -0.75
NEDD9-211ENST00000508546 CXCL16Q9H2A7 254 aa10.37□□□□□ -0.75
NEDD9-211ENST00000508546 PDZD7Q9H5P4 517 aa10.37□□□□□ -0.75
NEDD9-211ENST00000508546 LMAN1LQ9HAT1 526 aa10.37□□□□□ -0.75
NEDD9-211ENST00000508546 ZNF334Q9HCZ1 680 aaPredicted RBP10.37□□□□□ -0.75
NEDD9-211ENST00000508546 SNTG2Q9NY99 539 aa10.37□□□□□ -0.75
NEDD9-211ENST00000508546 KIF26AQ9ULI4 1882 aaPredicted RBP10.37□□□□□ -0.75
NEDD9-211ENST00000508546 KCNJ14Q9UNX9 436 aa10.37□□□□□ -0.75
NEDD9-211ENST00000508546 EML5Q05BV3 1969 aa10.37□□□□□ -0.75
NEDD9-211ENST00000508546 NUP210Q8TEM1 1887 aaPredicted RBP10.36□□□□□ -0.75
NEDD9-211ENST00000508546 TTLL13PA6NNM8 815 aa10.36□□□□□ -0.75
NEDD9-211ENST00000508546 TRAPPC3O43617 180 aa10.36□□□□□ -0.75
NEDD9-211ENST00000508546 B3GAT3O94766 335 aa10.36□□□□□ -0.75
NEDD9-211ENST00000508546 ABLIM3O94929 683 aa10.36□□□□□ -0.75
NEDD9-211ENST00000508546 PAPSS2O95340 614 aaPredicted RBP10.36□□□□□ -0.75
NEDD9-211ENST00000508546 LRG1P02750 347 aa10.36□□□□□ -0.75
NEDD9-211ENST00000508546 CHRNB1P11230 501 aa10.36□□□□□ -0.75
NEDD9-211ENST00000508546 PSMC3P17980 439 aa10.36□□□□□ -0.75
NEDD9-211ENST00000508546 CXCL12P48061 93 aa10.36□□□□□ -0.75
NEDD9-211ENST00000508546 SRSF5Q13243 272 aaKnown RBP10.36□□□□□ -0.75
NEDD9-211ENST00000508546 SIM2Q14190 667 aaPredicted RBP10.36□□□□□ -0.75
NEDD9-211ENST00000508546 SF3A2Q15428 464 aaKnown RBP10.36□□□□□ -0.75
NEDD9-211ENST00000508546 FAM78AQ5JUQ0 283 aa10.36□□□□□ -0.75
NEDD9-211ENST00000508546 SLC8B1Q6J4K2 584 aa10.36□□□□□ -0.75
NEDD9-211ENST00000508546 CD300LGQ6UXG3 332 aa10.36□□□□□ -0.75
NEDD9-211ENST00000508546 ZBTB8OSQ8IWT0 167 aa10.36□□□□□ -0.75
NEDD9-211ENST00000508546 DEPDC1BQ8WUY9 529 aa10.36□□□□□ -0.75
NEDD9-211ENST00000508546 CCDC43Q96MW1 224 aaKnown RBP10.36□□□□□ -0.75
NEDD9-211ENST00000508546 UROC1Q96N76 676 aa10.36□□□□□ -0.75
NEDD9-211ENST00000508546 PPP1R10Q96QC0 940 aaKnown RBP10.36□□□□□ -0.75
NEDD9-211ENST00000508546 ADPGKQ9BRR6 497 aa10.36□□□□□ -0.75
NEDD9-211ENST00000508546 PCDHA12Q9UN75 941 aa10.36□□□□□ -0.75
NEDD9-211ENST00000508546 ATG2BQ96BY7 2078 aa10.36□□□□□ -0.75
NEDD9-211ENST00000508546 LAMA5O15230 3695 aa10.35□□□□□ -0.75
NEDD9-211ENST00000508546 WDR27A2RRH5 827 aa10.35□□□□□ -0.75
NEDD9-211ENST00000508546 HRO43593 1189 aa10.35□□□□□ -0.75
NEDD9-211ENST00000508546 ATF2P15336 505 aa10.35□□□□□ -0.75
NEDD9-211ENST00000508546 TKTP29401 623 aaKnown RBP10.35□□□□□ -0.75
NEDD9-211ENST00000508546 GDI1P31150 447 aa10.35□□□□□ -0.75
NEDD9-211ENST00000508546 ELF1P32519 619 aa10.35□□□□□ -0.75
NEDD9-211ENST00000508546 SATB1Q01826 763 aa10.35□□□□□ -0.75
NEDD9-211ENST00000508546 ROR1Q01973 937 aa10.35□□□□□ -0.75
NEDD9-211ENST00000508546 PRPF4BQ13523 1007 aaKnown RBP10.35□□□□□ -0.75
NEDD9-211ENST00000508546 GAS6Q14393 721 aa10.35□□□□□ -0.75
NEDD9-211ENST00000508546 GRM2Q14416 872 aa10.35□□□□□ -0.75
NEDD9-211ENST00000508546 MAPK6Q16659 721 aa10.35□□□□□ -0.75
NEDD9-211ENST00000508546 UPP1Q16831 310 aa10.35□□□□□ -0.75
NEDD9-211ENST00000508546 ERICH6BQ5W0A0 696 aa10.35□□□□□ -0.75
NEDD9-211ENST00000508546 C1orf228Q6PIY5 440 aa10.35□□□□□ -0.75
NEDD9-211ENST00000508546 VITQ6UXI7 678 aa10.35□□□□□ -0.75
NEDD9-211ENST00000508546 PIK3AP1Q6ZUJ8 805 aa10.35□□□□□ -0.75
NEDD9-211ENST00000508546 RUFY3Q7L099 469 aa10.35□□□□□ -0.75
NEDD9-211ENST00000508546 NOSTRINQ8IVI9 506 aa10.35□□□□□ -0.75
NEDD9-211ENST00000508546 TCEAL8Q8IYN2 117 aa10.35□□□□□ -0.75
NEDD9-211ENST00000508546 SPEM1Q8N4L4 309 aa10.35□□□□□ -0.75
NEDD9-211ENST00000508546 MCPH1Q8NEM0 835 aa10.35□□□□□ -0.75
NEDD9-211ENST00000508546 PIGOQ8TEQ8 1089 aa10.35□□□□□ -0.75
NEDD9-211ENST00000508546 SMARCD2Q92925 531 aa10.35□□□□□ -0.75
NEDD9-211ENST00000508546 TCEAL4Q96EI5 215 aa10.35□□□□□ -0.75
NEDD9-211ENST00000508546 MSANTD3Q96H12 275 aa10.35□□□□□ -0.75
NEDD9-211ENST00000508546 CORO1BQ9BR76 489 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms