RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 IPO13O94829 963 aaKnown RBP5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 AHSGP02765 367 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 GNAI3P08754 354 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 KITP10721 976 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 ALAS1P13196 640 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 MYF5P13349 255 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 SLC5A1P13866 664 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 MSX2P35548 267 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 PIK3CGP48736 1102 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 GNAI1P63096 354 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 UBXN2BQ14CS0 331 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 ELAVL1Q15717 326 aaKnown RBP5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 KRTAP19-4Q3LI73 84 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 CCDC93Q567U6 631 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 ATXN7L2Q5T6C5 722 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 TCTN3Q6NUS6 607 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 EFCAB12Q6NXP0 572 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 GPRIN1Q7Z2K8 1008 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 UBE3BQ7Z3V4 1068 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 ELOA2Q8IYF1 753 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 KRT78Q8N1N4 520 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 IL31RAQ8NI17 732 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 ST8SIA2Q92186 375 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 ANKS1AQ92625 1134 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 TFAP2CQ92754 450 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 PMM1Q92871 262 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 APIPQ96GX9 242 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 MPHOSPH6Q99547 160 aaKnown RBP5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 NDC1Q9BTX1 674 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 C1orf43Q9BWL3 253 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 APOL5Q9BWW9 433 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 LSM14BQ9BX40 385 aaKnown RBP5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 PACSIN1Q9BY11 444 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 LRRC27Q9C0I9 530 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 GSTO2Q9H4Y5 243 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 SPON1Q9HCB6 807 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 KIAA1586Q9HCI6 787 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 PARD6AQ9NPB6 346 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 SLAMF7Q9NQ25 335 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 PIH1D1Q9NWS0 290 aaKnown RBP5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 FAM30AQ9NZY2 134 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 ZFR2Q9UPR6 939 aaKnown RBP5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 SH3BP1Q9Y3L3 701 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 SLC30A1Q9Y6M5 507 aa5.06□□□□□ -1.6
HMGB1P28-201ENST00000507778 SLC43A1O75387 559 aa5.05□□□□□ -1.6
HMGB1P28-201ENST00000507778 SLC7A1P30825 629 aa5.05□□□□□ -1.6
HMGB1P28-201ENST00000507778 HHEXQ03014 270 aa5.05□□□□□ -1.6
HMGB1P28-201ENST00000507778 FOXL1Q12952 345 aa5.05□□□□□ -1.6
HMGB1P28-201ENST00000507778 GLB1LQ6UWU2 654 aa5.05□□□□□ -1.6
HMGB1P28-201ENST00000507778 LIMS2Q7Z4I7 341 aa5.05□□□□□ -1.6
HMGB1P28-201ENST00000507778 POLNQ7Z5Q5 900 aa5.05□□□□□ -1.6
HMGB1P28-201ENST00000507778 CIR1Q86X95 450 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P28-201ENST00000507778 FUKQ8N0W3 1084 aa5.05□□□□□ -1.6
HMGB1P28-201ENST00000507778 D2HGDHQ8N465 521 aa5.05□□□□□ -1.6
HMGB1P28-201ENST00000507778 AOPEPQ8N6M6 819 aa5.05□□□□□ -1.6
HMGB1P28-201ENST00000507778 PARD3BQ8TEW8 1205 aa5.05□□□□□ -1.6
HMGB1P28-201ENST00000507778 SLC39A13Q96H72 371 aa5.05□□□□□ -1.6
HMGB1P28-201ENST00000507778 TNIP3Q96KP6 325 aa5.05□□□□□ -1.6
HMGB1P28-201ENST00000507778 STRBPQ96SI9 672 aaKnown RBP5.05□□□□□ -1.6
HMGB1P28-201ENST00000507778 ELAC2Q9BQ52 826 aaKnown RBP5.05□□□□□ -1.6
HMGB1P28-201ENST00000507778 BRD9Q9H8M2 597 aa5.05□□□□□ -1.6
HMGB1P28-201ENST00000507778 RSAD1Q9HA92 442 aa5.05□□□□□ -1.6
HMGB1P28-201ENST00000507778 RTEL1Q9NZ71 1219 aa5.05□□□□□ -1.6
HMGB1P28-201ENST00000507778 JKAMPQ9P055 326 aa5.05□□□□□ -1.6
HMGB1P28-201ENST00000507778 POGKQ9P215 609 aa5.05□□□□□ -1.6
HMGB1P28-201ENST00000507778 ZDHHC8Q9ULC8 765 aa5.05□□□□□ -1.6
HMGB1P28-201ENST00000507778 PHTF1Q9UMS5 762 aa5.05□□□□□ -1.6
HMGB1P28-201ENST00000507778 COMMD10Q9Y6G5 202 aa5.05□□□□□ -1.6
HMGB1P28-201ENST00000507778 ARID4BQ4LE39 1312 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 ISM1B1AKI9 464 aa5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 FOXS1O43638 330 aa5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 HAUS5O94927 633 aa5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 MYL3P08590 195 aa5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 NPR1P16066 1061 aa5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 RPL17P18621 184 aaKnown RBP5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 MGAT1P26572 445 aa5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 AK2P54819 239 aa5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 JAG1P78504 1218 aa5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 IFIT5Q13325 482 aaKnown RBP5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 METTL24Q5JXM2 366 aa5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 EMC10Q5UCC4 262 aa5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 DRICH1Q6PGQ1 229 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 GSPT2Q8IYD1 628 aaKnown RBP5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 ANKRD35Q8N283 1001 aa5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 CELF5Q8N6W0 485 aaKnown RBP5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 MDGA1Q8NFP4 955 aa5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 PHKBQ93100 1093 aa5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 MRGPRX1Q96LB2 322 aa5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 TBCBQ99426 244 aa5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 ADAM7Q9H2U9 754 aa5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 ZNF287Q9HBT7 754 aa5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 KLHL11Q9NVR0 708 aa5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 RLIMQ9NVW2 624 aa5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 FBXO34Q9NWN3 711 aa5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 CFAP97Q9P2B7 532 aa5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 OGDHLQ9ULD0 1010 aa5.04□□□□□ -1.6
HMGB1P28-201ENST00000507778 USP19O94966 1318 aa5.03□□□□□ -1.6
HMGB1P28-201ENST00000507778 PRSS29PA6NIE9 313 aa5.03□□□□□ -1.6
HMGB1P28-201ENST00000507778 RHPN2P1A8MT19 583 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms