RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.28■□□□□ 0.52
PDLIM7-215ENST00000506161 CCDC149Q6ZUS6 474 aa18.28■□□□□ 0.52
PDLIM7-215ENST00000506161 SFR1Q86XK3 245 aa18.28■□□□□ 0.52
PDLIM7-215ENST00000506161 ZDHHC14Q8IZN3 488 aa18.28■□□□□ 0.52
PDLIM7-215ENST00000506161 RSAD2Q8WXG1 361 aa18.28■□□□□ 0.52
PDLIM7-215ENST00000506161 SMG7Q92540 1137 aaKnown RBP18.28■□□□□ 0.52
PDLIM7-215ENST00000506161 ZHX3Q9H4I2 956 aa18.28■□□□□ 0.52
PDLIM7-215ENST00000506161 PARVGQ9HBI0 331 aa18.28■□□□□ 0.52
PDLIM7-215ENST00000506161 WDR6Q9NNW5 1121 aaKnown RBP18.28■□□□□ 0.52
PDLIM7-215ENST00000506161 TFIP11Q9UBB9 837 aaKnown RBP18.28■□□□□ 0.52
PDLIM7-215ENST00000506161 CLUHO75153 1309 aa18.27■□□□□ 0.52
PDLIM7-215ENST00000506161 TTC26A0AVF1 554 aa18.27■□□□□ 0.52
PDLIM7-215ENST00000506161 PROB1E7EW31 1015 aa18.27■□□□□ 0.52
PDLIM7-215ENST00000506161 H0Y858 1186 aa18.27■□□□□ 0.52
PDLIM7-215ENST00000506161 ZMYND10O75800 440 aa18.27■□□□□ 0.52
PDLIM7-215ENST00000506161 OR1D2P34982 312 aa18.27■□□□□ 0.52
PDLIM7-215ENST00000506161 NASPP49321 788 aaPredicted RBP18.27■□□□□ 0.52
PDLIM7-215ENST00000506161 KCNA1Q09470 495 aa18.27■□□□□ 0.52
PDLIM7-215ENST00000506161 ENOX2Q16206 610 aaKnown RBP18.27■□□□□ 0.52
PDLIM7-215ENST00000506161 ERMP1Q7Z2K6 904 aa18.27■□□□□ 0.52
PDLIM7-215ENST00000506161 ZSWIM2Q8NEG5 633 aa18.27■□□□□ 0.52
PDLIM7-215ENST00000506161 RASSF8Q8NHQ8 419 aa18.27■□□□□ 0.52
PDLIM7-215ENST00000506161 TOPORSQ9NS56 1045 aaPredicted RBP18.27■□□□□ 0.52
PDLIM7-215ENST00000506161 USTQ9Y2C2 406 aa18.27■□□□□ 0.52
PDLIM7-215ENST00000506161 LACTBL1A8MY62 500 aa18.26■□□□□ 0.51
PDLIM7-215ENST00000506161 NRG2O14511 850 aaPredicted RBP18.26■□□□□ 0.51
PDLIM7-215ENST00000506161 CLDN3O15551 220 aa18.26■□□□□ 0.51
PDLIM7-215ENST00000506161 TBC1D4O60343 1298 aa18.26■□□□□ 0.51
PDLIM7-215ENST00000506161 PPP1R37O75864 691 aa18.26■□□□□ 0.51
PDLIM7-215ENST00000506161 KRT18P05783 430 aaKnown RBP18.26■□□□□ 0.51
PDLIM7-215ENST00000506161 CASP5P51878 434 aa18.26■□□□□ 0.51
PDLIM7-215ENST00000506161 WNT7BP56706 349 aa18.26■□□□□ 0.51
PDLIM7-215ENST00000506161 GTF2BQ00403 316 aa18.26■□□□□ 0.51
PDLIM7-215ENST00000506161 ZBTB6Q15916 424 aa18.26■□□□□ 0.51
PDLIM7-215ENST00000506161 MAP4K3Q8IVH8 894 aa18.26■□□□□ 0.51
PDLIM7-215ENST00000506161 SPRYD3Q8NCJ5 442 aa18.26■□□□□ 0.51
PDLIM7-215ENST00000506161 LINC00301Q8NCQ3 95 aa18.26■□□□□ 0.51
PDLIM7-215ENST00000506161 HDAC7Q8WUI4 952 aa18.26■□□□□ 0.51
PDLIM7-215ENST00000506161 DDX12PQ92771 950 aa18.26■□□□□ 0.51
PDLIM7-215ENST00000506161 STAMQ92783 540 aa18.26■□□□□ 0.51
PDLIM7-215ENST00000506161 BICD1Q96G01 975 aa18.26■□□□□ 0.51
PDLIM7-215ENST00000506161 CHAMP1Q96JM3 812 aa18.26■□□□□ 0.51
PDLIM7-215ENST00000506161 UROC1Q96N76 676 aa18.26■□□□□ 0.51
PDLIM7-215ENST00000506161 PRKD2Q9BZL6 878 aa18.26■□□□□ 0.51
PDLIM7-215ENST00000506161 PLEKHA4Q9H4M7 779 aa18.26■□□□□ 0.51
PDLIM7-215ENST00000506161 HCFC1R1Q9NWW0 138 aa18.26■□□□□ 0.51
PDLIM7-215ENST00000506161 TBC1D7Q9P0N9 293 aa18.26■□□□□ 0.51
PDLIM7-215ENST00000506161 SORCS3Q9UPU3 1222 aa18.26■□□□□ 0.51
PDLIM7-215ENST00000506161 CDY1Q9Y6F8 540 aa18.26■□□□□ 0.51
PDLIM7-215ENST00000506161 CACNA1AO00555 2505 aa18.25■□□□□ 0.51
PDLIM7-215ENST00000506161 A0A0B4J269 797 aa18.25■□□□□ 0.51
PDLIM7-215ENST00000506161 NARSO43776 548 aaKnown RBP18.25■□□□□ 0.51
PDLIM7-215ENST00000506161 LIG4P49917 911 aa18.25■□□□□ 0.51
PDLIM7-215ENST00000506161 NUBP1P53384 320 aa18.25■□□□□ 0.51
PDLIM7-215ENST00000506161 RAB33AQ14088 237 aa18.25■□□□□ 0.51
PDLIM7-215ENST00000506161 FOXD4L6Q3SYB3 417 aaPredicted RBP18.25■□□□□ 0.51
PDLIM7-215ENST00000506161 VARS2Q5ST30 1063 aaKnown RBP18.25■□□□□ 0.51
PDLIM7-215ENST00000506161 SCARA3Q6AZY7 606 aa18.25■□□□□ 0.51
PDLIM7-215ENST00000506161 FOXD4L3Q6VB84 417 aaPredicted RBP18.25■□□□□ 0.51
PDLIM7-215ENST00000506161 ASCL5Q7RTU5 278 aa18.25■□□□□ 0.51
PDLIM7-215ENST00000506161 APBB1IPQ7Z5R6 666 aaPredicted RBP18.25■□□□□ 0.51
PDLIM7-215ENST00000506161 STRA6Q9BX79 667 aa18.25■□□□□ 0.51
PDLIM7-215ENST00000506161 MORC2Q9Y6X9 1032 aaPredicted RBP18.25■□□□□ 0.51
PDLIM7-215ENST00000506161 CACNA1HO95180 2353 aa18.24■□□□□ 0.51
PDLIM7-215ENST00000506161 WDR27A2RRH5 827 aa18.24■□□□□ 0.51
PDLIM7-215ENST00000506161 HNRNPDLO14979 420 aaKnown RBP18.24■□□□□ 0.51
PDLIM7-215ENST00000506161 CCL16O15467 120 aa18.24■□□□□ 0.51
PDLIM7-215ENST00000506161 C8AP07357 584 aa18.24■□□□□ 0.51
PDLIM7-215ENST00000506161 ADRB2P07550 413 aa18.24■□□□□ 0.51
PDLIM7-215ENST00000506161 MATR3P43243 847 aaKnown RBP eCLIP18.24■□□□□ 0.51
PDLIM7-215ENST00000506161 ELAVL2Q12926 359 aaKnown RBP18.24■□□□□ 0.51
PDLIM7-215ENST00000506161 MRPL58Q14197 206 aaKnown RBP18.24■□□□□ 0.51
PDLIM7-215ENST00000506161 RRAGBQ5VZM2 374 aa18.24■□□□□ 0.51
PDLIM7-215ENST00000506161 GRASPQ7Z6J2 395 aaPredicted RBP18.24■□□□□ 0.51
PDLIM7-215ENST00000506161 PDILTQ8N807 584 aa18.24■□□□□ 0.51
PDLIM7-215ENST00000506161 GLIS3Q8NEA6 775 aa18.24■□□□□ 0.51
PDLIM7-215ENST00000506161 SLC7A14Q8TBB6 771 aa18.24■□□□□ 0.51
PDLIM7-215ENST00000506161 FAM84AQ96KN4 292 aa18.24■□□□□ 0.51
PDLIM7-215ENST00000506161 RHOBTB2Q9BYZ6 727 aa18.24■□□□□ 0.51
PDLIM7-215ENST00000506161 ZSCAN16Q9H4T2 348 aaPredicted RBP18.24■□□□□ 0.51
PDLIM7-215ENST00000506161 ZDHHC7Q9NXF8 308 aa18.24■□□□□ 0.51
PDLIM7-215ENST00000506161 STK17AQ9UEE5 414 aa18.24■□□□□ 0.51
PDLIM7-215ENST00000506161 CPSF3Q9UKF6 684 aaKnown RBP18.24■□□□□ 0.51
PDLIM7-215ENST00000506161 OGTO15294 1046 aa18.23■□□□□ 0.51
PDLIM7-215ENST00000506161 TBCAO75347 108 aaKnown RBP18.23■□□□□ 0.51
PDLIM7-215ENST00000506161 SEC24AO95486 1093 aa18.23■□□□□ 0.51
PDLIM7-215ENST00000506161 C1RP00736 705 aa18.23■□□□□ 0.51
PDLIM7-215ENST00000506161 NFICP08651 508 aa18.23■□□□□ 0.51
PDLIM7-215ENST00000506161 CLTAP09496 248 aa18.23■□□□□ 0.51
PDLIM7-215ENST00000506161 ADSSP30520 456 aa18.23■□□□□ 0.51
PDLIM7-215ENST00000506161 GBP2P32456 591 aaPredicted RBP18.23■□□□□ 0.51
PDLIM7-215ENST00000506161 ACOT2P49753 483 aa18.23■□□□□ 0.51
PDLIM7-215ENST00000506161 ROR1Q01973 937 aa18.23■□□□□ 0.51
PDLIM7-215ENST00000506161 E2F4Q16254 413 aa18.23■□□□□ 0.51
PDLIM7-215ENST00000506161 CRELD2Q6UXH1 353 aaPredicted RBP18.23■□□□□ 0.51
PDLIM7-215ENST00000506161 GET4Q7L5D6 327 aaPredicted RBP18.23■□□□□ 0.51
PDLIM7-215ENST00000506161 ZNF720Q7Z2F6 126 aa18.23■□□□□ 0.51
PDLIM7-215ENST00000506161 KRI1Q8N9T8 703 aaKnown RBP18.23■□□□□ 0.51
PDLIM7-215ENST00000506161 KIF12Q96FN5 646 aa18.23■□□□□ 0.51
PDLIM7-215ENST00000506161 SUSD3Q96L08 255 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms