RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 FCARP24071 287 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 HOXA9P31269 272 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 CNR2P34972 360 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 SREBF1P36956 1147 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 ZNF252P-AS1Q0IIN9 211 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 TARBP2Q15633 366 aaKnown RBP7.86□□□□□ -1.15
VCAN-206ENST00000505615 WDR44Q5JSH3 913 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 UBXN11Q5T124 520 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 ZNF746Q6NUN9 644 aaPredicted RBP7.86□□□□□ -1.15
VCAN-206ENST00000505615 CWC27Q6UX04 472 aaKnown RBP7.86□□□□□ -1.15
VCAN-206ENST00000505615 CATIPQ7Z7H3 387 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 ZNF654Q8IZM8 581 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 IGDCC4Q8TDY8 1250 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 FAM167AQ96KS9 214 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 CEP89Q96ST8 783 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 FDXACB1Q9BRP7 624 aaPredicted RBP7.86□□□□□ -1.15
VCAN-206ENST00000505615 ANO3Q9BYT9 981 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 GCOM2Q9BZD3 368 aaPredicted RBP7.86□□□□□ -1.15
VCAN-206ENST00000505615 GPR62Q9BZJ7 368 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 SMOC1Q9H4F8 434 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.86□□□□□ -1.15
VCAN-206ENST00000505615 HCFC1R1Q9NWW0 138 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 C2orf42Q9NWW7 574 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 GABBR1Q9UBS5 961 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 DYRK1BQ9Y463 629 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 URB1O60287 2271 aaKnown RBP7.86□□□□□ -1.15
VCAN-206ENST00000505615 TRIP11Q15643 1979 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 CFAP46Q8IYW2 2715 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 CYSRT1A8MQ03 144 aa7.85□□□□□ -1.15
VCAN-206ENST00000505615 IPO5O00410 1097 aaKnown RBP7.85□□□□□ -1.15
VCAN-206ENST00000505615 CCL16O15467 120 aa7.85□□□□□ -1.15
VCAN-206ENST00000505615 AP1G2O75843 785 aa7.85□□□□□ -1.15
VCAN-206ENST00000505615 DDAH1O94760 285 aa7.85□□□□□ -1.15
VCAN-206ENST00000505615 POU2F2P09086 479 aa7.85□□□□□ -1.15
VCAN-206ENST00000505615 CHRNB1P11230 501 aa7.85□□□□□ -1.15
VCAN-206ENST00000505615 RAP1GAPP47736 663 aa7.85□□□□□ -1.15
VCAN-206ENST00000505615 OR1G1P47890 313 aa7.85□□□□□ -1.15
VCAN-206ENST00000505615 CXCL12P48061 93 aa7.85□□□□□ -1.15
VCAN-206ENST00000505615 NOVA1P51513 510 aaKnown RBP7.85□□□□□ -1.15
VCAN-206ENST00000505615 PRKCEQ02156 737 aa7.85□□□□□ -1.15
VCAN-206ENST00000505615 PPP2R5DQ14738 602 aa7.85□□□□□ -1.15
VCAN-206ENST00000505615 UGCGQ16739 394 aa7.85□□□□□ -1.15
VCAN-206ENST00000505615 ANKRD45Q5TZF3 282 aa7.85□□□□□ -1.15
VCAN-206ENST00000505615 TANGO2Q6ICL3 276 aa7.85□□□□□ -1.15
VCAN-206ENST00000505615 FUT10Q6P4F1 479 aa7.85□□□□□ -1.15
VCAN-206ENST00000505615 LONP2Q86WA8 852 aa7.85□□□□□ -1.15
VCAN-206ENST00000505615 PLA2G4DQ86XP0 818 aa7.85□□□□□ -1.15
VCAN-206ENST00000505615 SMAP1Q8IYB5 467 aaPredicted RBP7.85□□□□□ -1.15
VCAN-206ENST00000505615 CMTR1Q8N1G2 835 aaKnown RBP7.85□□□□□ -1.15
VCAN-206ENST00000505615 SPEM1Q8N4L4 309 aa7.85□□□□□ -1.15
VCAN-206ENST00000505615 BEND7Q8N7W2 519 aaPredicted RBP7.85□□□□□ -1.15
VCAN-206ENST00000505615 C12orf50Q8NA57 414 aaPredicted RBP7.85□□□□□ -1.15
VCAN-206ENST00000505615 CRYGNQ8WXF5 182 aa7.85□□□□□ -1.15
VCAN-206ENST00000505615 ING5Q8WYH8 240 aa7.85□□□□□ -1.15
VCAN-206ENST00000505615 RILPL2Q969X0 211 aa7.85□□□□□ -1.15
VCAN-206ENST00000505615 PGBD4Q96DM1 585 aa7.85□□□□□ -1.15
VCAN-206ENST00000505615 FAM193BQ96PV7 902 aaPredicted RBP7.85□□□□□ -1.15
VCAN-206ENST00000505615 ARRDC1-AS1Q9H2J1 176 aa7.85□□□□□ -1.15
VCAN-206ENST00000505615 LMAN1LQ9HAT1 526 aa7.85□□□□□ -1.15
VCAN-206ENST00000505615 AGPAT5Q9NUQ2 364 aa7.85□□□□□ -1.15
VCAN-206ENST00000505615 KANSL3Q9P2N6 904 aa7.85□□□□□ -1.15
VCAN-206ENST00000505615 HECTD1Q9ULT8 2610 aa7.85□□□□□ -1.15
VCAN-206ENST00000505615 ZNF462Q96JM2 2506 aa7.85□□□□□ -1.15
VCAN-206ENST00000505615 THADAQ6YHU6 1953 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 TENM4Q6N022 2769 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 NCANO14594 1321 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 IGKV6-21A0A0C4DH24 114 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 ERICH2A1L162 156 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 MAN2B1O00754 1011 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 C8AP07357 584 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 PSAPP07602 524 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 CYP21A2P08686 494 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 HOXA11P31270 313 aaPredicted RBP7.84□□□□□ -1.15
VCAN-206ENST00000505615 SLC5A9Q2M3M2 681 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 USP41Q3LFD5 358 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 RTP2Q5QGT7 225 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 HEATR6Q6AI08 1181 aaKnown RBP7.84□□□□□ -1.15
VCAN-206ENST00000505615 WWC2Q6AWC2 1192 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 PRSS55Q6UWB4 352 aaPredicted RBP7.84□□□□□ -1.15
VCAN-206ENST00000505615 Q6ZS52 159 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 CEP68Q76N32 757 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 CATSPER4Q7RTX7 472 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 ZNF410Q86VK4 478 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 WDR5BQ86VZ2 330 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 MAP4K3Q8IVH8 894 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 MB21D2Q8IYB1 491 aaPredicted RBP7.84□□□□□ -1.15
VCAN-206ENST00000505615 SMG8Q8ND04 991 aaKnown RBP7.84□□□□□ -1.15
VCAN-206ENST00000505615 CTCFLQ8NI51 663 aaPredicted RBP7.84□□□□□ -1.15
VCAN-206ENST00000505615 FAM3CQ92520 227 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 ELSPBP1Q96BH3 223 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 LOXL4Q96JB6 756 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 LZTS2Q9BRK4 669 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 SCNM1Q9BWG6 230 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 RIC8AQ9NPQ8 531 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 MIOSQ9NXC5 875 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 DNMT3BQ9UBC3 853 aaKnown RBP7.84□□□□□ -1.15
VCAN-206ENST00000505615 KCNH3Q9ULD8 1083 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 PCDHA10Q9Y5I2 948 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 ARID2Q68CP9 1835 aa7.84□□□□□ -1.15
VCAN-206ENST00000505615 GOLGA4Q13439 2230 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms