RNA–Protein interactions for RNA: ENST00000504956.5

AFF1-205, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 2

Gene AFF1, Length 1,668 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-205ENST00000504956 TMEM175Q9BSA9 504 aa17.15■□□□□ 0.34
AFF1-205ENST00000504956 XPOTO43592 962 aaKnown RBP17.14■□□□□ 0.33
AFF1-205ENST00000504956 ERVK-21P61565 698 aa17.14■□□□□ 0.33
AFF1-205ENST00000504956 EPC2Q52LR7 807 aa17.14■□□□□ 0.33
AFF1-205ENST00000504956 DCAF17Q5H9S7 520 aaPredicted RBP17.14■□□□□ 0.33
AFF1-205ENST00000504956 SPATA1Q5VX52 437 aa17.14■□□□□ 0.33
AFF1-205ENST00000504956 NT5DC4Q86YG4 428 aa17.14■□□□□ 0.33
AFF1-205ENST00000504956 AOPEPQ8N6M6 819 aa17.14■□□□□ 0.33
AFF1-205ENST00000504956 HASPINQ8TF76 798 aa17.14■□□□□ 0.33
AFF1-205ENST00000504956 BCL7CQ8WUZ0 217 aaPredicted RBP17.14■□□□□ 0.33
AFF1-205ENST00000504956 ARNTL2Q8WYA1 636 aa17.14■□□□□ 0.33
AFF1-205ENST00000504956 BORCS6Q96GS4 357 aa17.14■□□□□ 0.33
AFF1-205ENST00000504956 ANKRD36BP1Q96IX9 119 aa17.14■□□□□ 0.33
AFF1-205ENST00000504956 TSPAN18Q96SJ8 248 aa17.14■□□□□ 0.33
AFF1-205ENST00000504956 MMRN2Q9H8L6 949 aa17.14■□□□□ 0.33
AFF1-205ENST00000504956 AAASQ9NRG9 546 aa17.14■□□□□ 0.33
AFF1-205ENST00000504956 INTS13Q9NVM9 706 aa17.14■□□□□ 0.33
AFF1-205ENST00000504956 DPP3Q9NY33 737 aa17.14■□□□□ 0.33
AFF1-205ENST00000504956 FAN1Q9Y2M0 1017 aa17.14■□□□□ 0.33
AFF1-205ENST00000504956 RWDD3Q9Y3V2 267 aa17.14■□□□□ 0.33
AFF1-205ENST00000504956 NFE2L3Q9Y4A8 694 aa17.14■□□□□ 0.33
AFF1-205ENST00000504956 PCDHB12Q9Y5F1 795 aa17.14■□□□□ 0.33
AFF1-205ENST00000504956 PODXLO00592 558 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 PPEF2O14830 753 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 FGFR1OPO95684 399 aaKnown RBP17.13■□□□□ 0.33
AFF1-205ENST00000504956 ALDH2P05091 517 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 CYP3A5P20815 502 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 IGFBP6P24592 240 aaPredicted RBP17.13■□□□□ 0.33
AFF1-205ENST00000504956 BMPR1AP36894 532 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 C1orf220Q5T0J3 134 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 TCERG1LQ5VWI1 586 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 CREBRFQ8IUR6 639 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 ENOX1Q8TC92 643 aaKnown RBP17.13■□□□□ 0.33
AFF1-205ENST00000504956 TMC2Q8TDI7 906 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 ZNF516Q92618 1163 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 CNOT6LQ96LI5 555 aaKnown RBP17.13■□□□□ 0.33
AFF1-205ENST00000504956 NAT10Q9H0A0 1025 aaKnown RBP17.13■□□□□ 0.33
AFF1-205ENST00000504956 SAMSN1Q9NSI8 373 aaKnown RBP17.13■□□□□ 0.33
AFF1-205ENST00000504956 MARCH5Q9NX47 278 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 ARMCX3Q9UH62 379 aaPredicted RBP17.13■□□□□ 0.33
AFF1-205ENST00000504956 TSC2P49815 1807 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 TRANK1O15050 2925 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 MYO7AQ13402 2215 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 KIF4AO95239 1232 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 TNNC2P02585 160 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 ITGB3P05106 788 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 ITGB1P05556 798 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 MYL5Q02045 173 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 UPP1Q16831 310 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 DUOXA2Q1HG44 320 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 SCARA3Q6AZY7 606 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 SLC39A11Q8N1S5 342 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 C1orf127Q8N9H9 656 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 KLHL23Q8NBE8 558 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 C3orf58Q8NDZ4 430 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 FBXO22Q8NEZ5 403 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 CACTINQ8WUQ7 758 aaKnown RBP17.13■□□□□ 0.33
AFF1-205ENST00000504956 UROC1Q96N76 676 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 SAMD11Q96NU1 681 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 ZNF576Q9H609 170 aa17.13■□□□□ 0.33
AFF1-205ENST00000504956 EPOPA6NHQ4 379 aa17.12■□□□□ 0.33
AFF1-205ENST00000504956 LRPAP1P30533 357 aa17.12■□□□□ 0.33
AFF1-205ENST00000504956 ZNF165P49910 485 aa17.12■□□□□ 0.33
AFF1-205ENST00000504956 LRSAM1Q6UWE0 723 aa17.12■□□□□ 0.33
AFF1-205ENST00000504956 FRMD5Q7Z6J6 570 aa17.12■□□□□ 0.33
AFF1-205ENST00000504956 USP37Q86T82 979 aa17.12■□□□□ 0.33
AFF1-205ENST00000504956 IRF2BP1Q8IU81 584 aa17.12■□□□□ 0.33
AFF1-205ENST00000504956 BPIFA3Q9BQP9 254 aa17.12■□□□□ 0.33
AFF1-205ENST00000504956 TTYH1Q9H313 450 aaPredicted RBP17.12■□□□□ 0.33
AFF1-205ENST00000504956 THAP9Q9H5L6 903 aa17.12■□□□□ 0.33
AFF1-205ENST00000504956 FGF18O76093 207 aa17.11■□□□□ 0.33
AFF1-205ENST00000504956 CSPG5O95196 566 aa17.11■□□□□ 0.33
AFF1-205ENST00000504956 GNA14O95837 355 aa17.11■□□□□ 0.33
AFF1-205ENST00000504956 KRT19P08727 400 aa17.11■□□□□ 0.33
AFF1-205ENST00000504956 POLR2BP30876 1174 aaKnown RBP17.11■□□□□ 0.33
AFF1-205ENST00000504956 GCLMP48507 274 aa17.11■□□□□ 0.33
AFF1-205ENST00000504956 CLDN10P78369 228 aa17.11■□□□□ 0.33
AFF1-205ENST00000504956 PPP3CAQ08209 521 aa17.11■□□□□ 0.33
AFF1-205ENST00000504956 NCAPHQ15003 741 aa17.11■□□□□ 0.33
AFF1-205ENST00000504956 TDRD10Q5VZ19 366 aaKnown RBP17.11■□□□□ 0.33
AFF1-205ENST00000504956 C9orf57Q5W0N0 161 aa17.11■□□□□ 0.33
AFF1-205ENST00000504956 TRAPPC11Q7Z392 1133 aa17.11■□□□□ 0.33
AFF1-205ENST00000504956 DHX40Q8IX18 779 aaKnown RBP17.11■□□□□ 0.33
AFF1-205ENST00000504956 GDPD5Q8WTR4 605 aa17.11■□□□□ 0.33
AFF1-205ENST00000504956 IGSF21Q96ID5 467 aa17.11■□□□□ 0.33
AFF1-205ENST00000504956 COLEC11Q9BWP8 271 aa17.11■□□□□ 0.33
AFF1-205ENST00000504956 METTL14Q9HCE5 456 aaKnown RBP17.11■□□□□ 0.33
AFF1-205ENST00000504956 ALG13Q9NP73 1137 aaKnown RBP17.11■□□□□ 0.33
AFF1-205ENST00000504956 SPG21Q9NZD8 308 aa17.11■□□□□ 0.33
AFF1-205ENST00000504956 C5orf67F2Z3F1 127 aa17.1■□□□□ 0.33
AFF1-205ENST00000504956 B3GAT3O94766 335 aa17.1■□□□□ 0.33
AFF1-205ENST00000504956 RPL9P32969 192 aaKnown RBP17.1■□□□□ 0.33
AFF1-205ENST00000504956 PPM1AP35813 382 aa17.1■□□□□ 0.33
AFF1-205ENST00000504956 MARSP56192 900 aaKnown RBP17.1■□□□□ 0.33
AFF1-205ENST00000504956 BIRC3Q13489 604 aa17.1■□□□□ 0.33
AFF1-205ENST00000504956 SLC35C1Q96A29 364 aa17.1■□□□□ 0.33
AFF1-205ENST00000504956 DDX27Q96GQ7 796 aaKnown RBP17.1■□□□□ 0.33
AFF1-205ENST00000504956 TMEM169Q96HH4 297 aa17.1■□□□□ 0.33
AFF1-205ENST00000504956 FAM161BQ96MY7 647 aa17.1■□□□□ 0.33
AFF1-205ENST00000504956 PLVAPQ9BX97 442 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms