RNA–Protein interactions for RNA: ENST00000504274.1

COPS4-203, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-203ENST00000504274 AGAP9Q5VTM2 703 aa6.57□□□□□ -1.36
COPS4-203ENST00000504274 CXorf57Q6NSI4 855 aaKnown RBP6.57□□□□□ -1.36
COPS4-203ENST00000504274 SLC4A10Q6U841 1118 aa6.57□□□□□ -1.36
COPS4-203ENST00000504274 HEATR3Q7Z4Q2 680 aa6.57□□□□□ -1.36
COPS4-203ENST00000504274 TCEAL8Q8IYN2 117 aa6.57□□□□□ -1.36
COPS4-203ENST00000504274 IL17RDQ8NFM7 739 aa6.57□□□□□ -1.36
COPS4-203ENST00000504274 PPP1R35Q8TAP8 253 aa6.57□□□□□ -1.36
COPS4-203ENST00000504274 TAAR9Q96RI9 348 aa6.57□□□□□ -1.36
COPS4-203ENST00000504274 ZNF747Q9BV97 191 aa6.57□□□□□ -1.36
COPS4-203ENST00000504274 METTL14Q9HCE5 456 aaKnown RBP6.57□□□□□ -1.36
COPS4-203ENST00000504274 NMRK2Q9NPI5 230 aa6.57□□□□□ -1.36
COPS4-203ENST00000504274 PARPBPQ9NWS1 579 aa6.57□□□□□ -1.36
COPS4-203ENST00000504274 SLC45A2Q9UMX9 530 aa6.57□□□□□ -1.36
COPS4-203ENST00000504274 TNFRSF1AP19438 455 aa6.56□□□□□ -1.36
COPS4-203ENST00000504274 MLC1Q15049 377 aa6.56□□□□□ -1.36
COPS4-203ENST00000504274 ZXDCQ2QGD7 858 aaPredicted RBP6.56□□□□□ -1.36
COPS4-203ENST00000504274 TSHZ3Q63HK5 1081 aa6.56□□□□□ -1.36
COPS4-203ENST00000504274 IGFL4Q6B9Z1 124 aa6.56□□□□□ -1.36
COPS4-203ENST00000504274 NXNQ6DKJ4 435 aa6.56□□□□□ -1.36
COPS4-203ENST00000504274 GDF7Q7Z4P5 450 aa6.56□□□□□ -1.36
COPS4-203ENST00000504274 FMNL3Q8IVF7 1028 aa6.56□□□□□ -1.36
COPS4-203ENST00000504274 MAGEB6Q8N7X4 407 aa6.56□□□□□ -1.36
COPS4-203ENST00000504274 C1GALT1C1Q96EU7 318 aa6.56□□□□□ -1.36
COPS4-203ENST00000504274 CGRRF1Q99675 332 aa6.56□□□□□ -1.36
COPS4-203ENST00000504274 ACO2Q99798 780 aaKnown RBP6.56□□□□□ -1.36
COPS4-203ENST00000504274 NR2E3Q9Y5X4 410 aa6.56□□□□□ -1.36
COPS4-203ENST00000504274 SLC43A1O75387 559 aa6.55□□□□□ -1.36
COPS4-203ENST00000504274 RPS6KA4O75676 772 aa6.55□□□□□ -1.36
COPS4-203ENST00000504274 MTHFD1P11586 935 aaKnown RBP6.55□□□□□ -1.36
COPS4-203ENST00000504274 NOMO3P69849 1222 aa6.55□□□□□ -1.36
COPS4-203ENST00000504274 NOMO2Q5JPE7 1267 aa6.55□□□□□ -1.36
COPS4-203ENST00000504274 FNDC7Q5VTL7 733 aa6.55□□□□□ -1.36
COPS4-203ENST00000504274 C14orf80Q86SX3 495 aa6.55□□□□□ -1.36
COPS4-203ENST00000504274 RHOT2Q8IXI1 618 aa6.55□□□□□ -1.36
COPS4-203ENST00000504274 SH2D3CQ8N5H7 860 aa6.55□□□□□ -1.36
COPS4-203ENST00000504274 OR56A1Q8NGH5 318 aa6.55□□□□□ -1.36
COPS4-203ENST00000504274 RUNDC1Q96C34 613 aa6.55□□□□□ -1.36
COPS4-203ENST00000504274 DCLRE1CQ96SD1 692 aaKnown RBP6.55□□□□□ -1.36
COPS4-203ENST00000504274 C1orf43Q9BWL3 253 aa6.55□□□□□ -1.36
COPS4-203ENST00000504274 VPS11Q9H270 941 aa6.55□□□□□ -1.36
COPS4-203ENST00000504274 SLC2A4RGQ9NR83 387 aa6.55□□□□□ -1.36
COPS4-203ENST00000504274 LMBRD1Q9NUN5 540 aa6.55□□□□□ -1.36
COPS4-203ENST00000504274 KLHL11Q9NVR0 708 aa6.55□□□□□ -1.36
COPS4-203ENST00000504274 ABCF2Q9UG63 623 aa6.55□□□□□ -1.36
COPS4-203ENST00000504274 POLHQ9Y253 713 aa6.55□□□□□ -1.36
COPS4-203ENST00000504274 SLC16A6O15403 523 aa6.54□□□□□ -1.36
COPS4-203ENST00000504274 NCR1O76036 304 aa6.54□□□□□ -1.36
COPS4-203ENST00000504274 RECQL4O94761 1208 aa6.54□□□□□ -1.36
COPS4-203ENST00000504274 ALAS1P13196 640 aa6.54□□□□□ -1.36
COPS4-203ENST00000504274 GCSHP23434 173 aa6.54□□□□□ -1.36
COPS4-203ENST00000504274 SMARCA1P28370 1054 aa6.54□□□□□ -1.36
COPS4-203ENST00000504274 SLFN5Q08AF3 891 aa6.54□□□□□ -1.36
COPS4-203ENST00000504274 ATP2B3Q16720 1220 aa6.54□□□□□ -1.36
COPS4-203ENST00000504274 UTP14CQ5TAP6 766 aaKnown RBP6.54□□□□□ -1.36
COPS4-203ENST00000504274 THEMIS2Q5TEJ8 643 aa6.54□□□□□ -1.36
COPS4-203ENST00000504274 LRRC55Q6ZSA7 311 aa6.54□□□□□ -1.36
COPS4-203ENST00000504274 FAM90A1Q86YD7 464 aa6.54□□□□□ -1.36
COPS4-203ENST00000504274 MYO1HQ8N1T3 1032 aa6.54□□□□□ -1.36
COPS4-203ENST00000504274 ZNF276Q8N554 614 aa6.54□□□□□ -1.36
COPS4-203ENST00000504274 FITM2Q8N6M3 262 aa6.54□□□□□ -1.36
COPS4-203ENST00000504274 ZBTB34Q8NCN2 500 aa6.54□□□□□ -1.36
COPS4-203ENST00000504274 PLBD2Q8NHP8 589 aa6.54□□□□□ -1.36
COPS4-203ENST00000504274 TBC1D15Q8TC07 691 aa6.54□□□□□ -1.36
COPS4-203ENST00000504274 FAM193BQ96PV7 902 aaPredicted RBP6.54□□□□□ -1.36
COPS4-203ENST00000504274 ZSWIM1Q9BR11 485 aa6.54□□□□□ -1.36
COPS4-203ENST00000504274 LRFN3Q9BTN0 628 aa6.54□□□□□ -1.36
COPS4-203ENST00000504274 PACSIN1Q9BY11 444 aa6.54□□□□□ -1.36
COPS4-203ENST00000504274 KMT5AQ9NQR1 393 aa6.54□□□□□ -1.36
COPS4-203ENST00000504274 GPRC5BQ9NZH0 403 aa6.54□□□□□ -1.36
COPS4-203ENST00000504274 GABBR1Q9UBS5 961 aa6.54□□□□□ -1.36
COPS4-203ENST00000504274 AATKQ6ZMQ8 1374 aa6.54□□□□□ -1.36
COPS4-203ENST00000504274 PRSS29PA6NIE9 313 aa6.53□□□□□ -1.36
COPS4-203ENST00000504274 UBXN7O94888 489 aa6.53□□□□□ -1.36
COPS4-203ENST00000504274 HAUS5O94927 633 aa6.53□□□□□ -1.36
COPS4-203ENST00000504274 AGFG2O95081 481 aa6.53□□□□□ -1.36
COPS4-203ENST00000504274 ELANEP08246 267 aa6.53□□□□□ -1.36
COPS4-203ENST00000504274 CKBP12277 381 aa6.53□□□□□ -1.36
COPS4-203ENST00000504274 TYRP14679 529 aa6.53□□□□□ -1.36
COPS4-203ENST00000504274 PRDX5P30044 214 aa6.53□□□□□ -1.36
COPS4-203ENST00000504274 NKX6-1P78426 367 aaPredicted RBP6.53□□□□□ -1.36
COPS4-203ENST00000504274 PLS1Q14651 629 aa6.53□□□□□ -1.36
COPS4-203ENST00000504274 LSM12Q3MHD2 195 aaKnown RBP6.53□□□□□ -1.36
COPS4-203ENST00000504274 DENND1CQ8IV53 801 aa6.53□□□□□ -1.36
COPS4-203ENST00000504274 CAMKK1Q8N5S9 505 aa6.53□□□□□ -1.36
COPS4-203ENST00000504274 NLGN4YQ8NFZ3 816 aaPredicted RBP6.53□□□□□ -1.36
COPS4-203ENST00000504274 SLC25A43Q8WUT9 341 aaPredicted RBP6.53□□□□□ -1.36
COPS4-203ENST00000504274 MARS2Q96GW9 593 aaKnown RBP6.53□□□□□ -1.36
COPS4-203ENST00000504274 SLC46A2Q9BY10 475 aa6.53□□□□□ -1.36
COPS4-203ENST00000504274 ZNF341Q9BYN7 854 aa6.53□□□□□ -1.36
COPS4-203ENST00000504274 AKIP1Q9NQ31 210 aa6.53□□□□□ -1.36
COPS4-203ENST00000504274 MAN1C1Q9NR34 630 aa6.53□□□□□ -1.36
COPS4-203ENST00000504274 VSX1Q9NZR4 365 aaPredicted RBP6.53□□□□□ -1.36
COPS4-203ENST00000504274 JKAMPQ9P055 326 aa6.53□□□□□ -1.36
COPS4-203ENST00000504274 USP25Q9UHP3 1055 aa6.53□□□□□ -1.36
COPS4-203ENST00000504274 MAP3K2Q9Y2U5 619 aa6.53□□□□□ -1.36
COPS4-203ENST00000504274 DIRC3C9JPN6 131 aa6.52□□□□□ -1.37
COPS4-203ENST00000504274 NPIPB8E9PQR5 432 aa6.52□□□□□ -1.37
COPS4-203ENST00000504274 H3BML4 177 aa6.52□□□□□ -1.37
COPS4-203ENST00000504274 FCER1AP12319 257 aa6.52□□□□□ -1.37
COPS4-203ENST00000504274 PHKA1P46020 1223 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms