RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 F2RL2O00254 374 aa6.13□□□□□ -1.43
TRAPPC13-205ENST00000504243 GRM6O15303 877 aa6.13□□□□□ -1.43
TRAPPC13-205ENST00000504243 TPD52L2O43399 206 aaKnown RBP6.13□□□□□ -1.43
TRAPPC13-205ENST00000504243 SNRPA1P09661 255 aaKnown RBP6.13□□□□□ -1.43
TRAPPC13-205ENST00000504243 FTH1P19P0C7X4 201 aa6.13□□□□□ -1.43
TRAPPC13-205ENST00000504243 MTHFD1P11586 935 aaKnown RBP6.13□□□□□ -1.43
TRAPPC13-205ENST00000504243 GNAT2P19087 354 aa6.13□□□□□ -1.43
TRAPPC13-205ENST00000504243 SLC7A1P30825 629 aa6.13□□□□□ -1.43
TRAPPC13-205ENST00000504243 MAGEA10P43363 369 aaPredicted RBP6.13□□□□□ -1.43
TRAPPC13-205ENST00000504243 PHKA1P46020 1223 aa6.13□□□□□ -1.43
TRAPPC13-205ENST00000504243 SEMA5AQ13591 1074 aa6.13□□□□□ -1.43
TRAPPC13-205ENST00000504243 LONRF1Q17RB8 773 aa6.13□□□□□ -1.43
TRAPPC13-205ENST00000504243 HS1BP3Q53T59 392 aa6.13□□□□□ -1.43
TRAPPC13-205ENST00000504243 CYB5RLQ6IPT4 315 aa6.13□□□□□ -1.43
TRAPPC13-205ENST00000504243 TCTN3Q6NUS6 607 aa6.13□□□□□ -1.43
TRAPPC13-205ENST00000504243 SWSAP1Q6NVH7 229 aa6.13□□□□□ -1.43
TRAPPC13-205ENST00000504243 PRRT2Q7Z6L0 340 aaPredicted RBP6.13□□□□□ -1.43
TRAPPC13-205ENST00000504243 PLXDC1Q8IUK5 500 aa6.13□□□□□ -1.43
TRAPPC13-205ENST00000504243 GPR135Q8IZ08 494 aa6.13□□□□□ -1.43
TRAPPC13-205ENST00000504243 SAMD3Q8N6K7 520 aa6.13□□□□□ -1.43
TRAPPC13-205ENST00000504243 PCSK9Q8NBP7 692 aaKnown RBP6.13□□□□□ -1.43
TRAPPC13-205ENST00000504243 ZNF512Q96ME7 567 aaPredicted RBP6.13□□□□□ -1.43
TRAPPC13-205ENST00000504243 CPPED1Q9BRF8 314 aaPredicted RBP6.13□□□□□ -1.43
TRAPPC13-205ENST00000504243 PLA2G12BQ9BX93 195 aa6.13□□□□□ -1.43
TRAPPC13-205ENST00000504243 LRRC27Q9C0I9 530 aa6.13□□□□□ -1.43
TRAPPC13-205ENST00000504243 OGDHLQ9ULD0 1010 aa6.13□□□□□ -1.43
TRAPPC13-205ENST00000504243 ZFR2Q9UPR6 939 aaKnown RBP6.13□□□□□ -1.43
TRAPPC13-205ENST00000504243 PRR5-ARHGAP8B1AHC4 643 aa6.12□□□□□ -1.43
TRAPPC13-205ENST00000504243 WNT10BO00744 389 aa6.12□□□□□ -1.43
TRAPPC13-205ENST00000504243 AHSGP02765 367 aa6.12□□□□□ -1.43
TRAPPC13-205ENST00000504243 BRAFP15056 766 aa6.12□□□□□ -1.43
TRAPPC13-205ENST00000504243 PRDX5P30044 214 aa6.12□□□□□ -1.43
TRAPPC13-205ENST00000504243 IFIT5Q13325 482 aaKnown RBP6.12□□□□□ -1.43
TRAPPC13-205ENST00000504243 POLD3Q15054 466 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC13-205ENST00000504243 PABPC1LQ4VXU2 614 aaKnown RBP6.12□□□□□ -1.43
TRAPPC13-205ENST00000504243 ANKS6Q68DC2 871 aa6.12□□□□□ -1.43
TRAPPC13-205ENST00000504243 APOA5Q6Q788 366 aa6.12□□□□□ -1.43
TRAPPC13-205ENST00000504243 PPP1R3BQ86XI6 285 aa6.12□□□□□ -1.43
TRAPPC13-205ENST00000504243 AOPEPQ8N6M6 819 aa6.12□□□□□ -1.43
TRAPPC13-205ENST00000504243 DCBLD1Q8N8Z6 715 aa6.12□□□□□ -1.43
TRAPPC13-205ENST00000504243 ACRBPQ8NEB7 543 aa6.12□□□□□ -1.43
TRAPPC13-205ENST00000504243 SLC35B2Q8TB61 432 aa6.12□□□□□ -1.43
TRAPPC13-205ENST00000504243 FBXO41Q8TF61 875 aa6.12□□□□□ -1.43
TRAPPC13-205ENST00000504243 PHACTR3Q96KR7 559 aa6.12□□□□□ -1.43
TRAPPC13-205ENST00000504243 TBCBQ99426 244 aa6.12□□□□□ -1.43
TRAPPC13-205ENST00000504243 MYD88Q99836 296 aa6.12□□□□□ -1.43
TRAPPC13-205ENST00000504243 ELAC2Q9BQ52 826 aaKnown RBP6.12□□□□□ -1.43
TRAPPC13-205ENST00000504243 NAA15Q9BXJ9 866 aaKnown RBP6.12□□□□□ -1.43
TRAPPC13-205ENST00000504243 ENKD1Q9H0I2 346 aa6.12□□□□□ -1.43
TRAPPC13-205ENST00000504243 ZNF700Q9H0M5 742 aa6.12□□□□□ -1.43
TRAPPC13-205ENST00000504243 KIAA1586Q9HCI6 787 aa6.12□□□□□ -1.43
TRAPPC13-205ENST00000504243 POGKQ9P215 609 aa6.12□□□□□ -1.43
TRAPPC13-205ENST00000504243 PHTF1Q9UMS5 762 aa6.12□□□□□ -1.43
TRAPPC13-205ENST00000504243 CORO2BQ9UQ03 480 aa6.12□□□□□ -1.43
TRAPPC13-205ENST00000504243 ATRNL1Q5VV63 1379 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 RHPN2P1A8MT19 583 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 B5MCH6 92 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 MFAP3LO75121 409 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 ZNF623O75123 536 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 RAD17O75943 681 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 POMCP01189 267 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 SBK3P0C264 359 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 ZKSCAN1P17029 563 aaPredicted RBP6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 PIK3CGP48736 1102 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 AK2P54819 239 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 CLRN1P58418 232 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 NOMO3P69849 1222 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 ICAM4Q14773 271 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 CCDC93Q567U6 631 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 LCE1DQ5T752 114 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 OTUD7BQ6GQQ9 843 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 SRLQ86TD4 932 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 FAM83AQ86UY5 434 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 ELOA2Q8IYF1 753 aaPredicted RBP6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 CELF5Q8N6W0 485 aaKnown RBP6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 MB21D1Q8N884 522 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 Q8TCH9 128 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 TFAP2CQ92754 450 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 C8orf49Q96NF6 230 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 C22orf23Q9BZE7 217 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 MRPL46Q9H2W6 279 aaKnown RBP6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 DEF6Q9H4E7 631 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 BRD9Q9H8M2 597 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 ZNF287Q9HBT7 754 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 CD248Q9HCU0 757 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 PIH1D1Q9NWS0 290 aaKnown RBP6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 PLA2G3Q9NZ20 509 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 TCAF1Q9Y4C2 921 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 DAAM1Q9Y4D1 1078 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 SLC30A1Q9Y6M5 507 aa6.11□□□□□ -1.43
TRAPPC13-205ENST00000504243 USP19O94966 1318 aa6.1□□□□□ -1.43
TRAPPC13-205ENST00000504243 TBKBP1A7MCY6 615 aa6.1□□□□□ -1.43
TRAPPC13-205ENST00000504243 NT5C1B-RDH14C9J2C7 533 aa6.1□□□□□ -1.43
TRAPPC13-205ENST00000504243 FOXS1O43638 330 aa6.1□□□□□ -1.43
TRAPPC13-205ENST00000504243 LDHAP00338 332 aaKnown RBP6.1□□□□□ -1.43
TRAPPC13-205ENST00000504243 ALAS1P13196 640 aa6.1□□□□□ -1.43
TRAPPC13-205ENST00000504243 MYF5P13349 255 aa6.1□□□□□ -1.43
TRAPPC13-205ENST00000504243 MSX2P35548 267 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC13-205ENST00000504243 PSMC1P62191 440 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms