RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 NPR3P17342 541 aa17.75■□□□□ 0.43
SCLT1-204ENST00000503215 FSHRP23945 695 aa17.75■□□□□ 0.43
SCLT1-204ENST00000503215 NMT1P30419 496 aaKnown RBP17.75■□□□□ 0.43
SCLT1-204ENST00000503215 MATR3P43243 847 aaKnown RBP eCLIP17.75■□□□□ 0.431e-6■■■■□ 19.8
SCLT1-204ENST00000503215 MRE11P49959 708 aa17.75■□□□□ 0.43
SCLT1-204ENST00000503215 GUCY2FP51841 1108 aa17.75■□□□□ 0.43
SCLT1-204ENST00000503215 CEBPZQ03701 1054 aaKnown RBP17.75■□□□□ 0.43
SCLT1-204ENST00000503215 VARS2Q5ST30 1063 aaKnown RBP17.75■□□□□ 0.43
SCLT1-204ENST00000503215 LIN9Q5TKA1 542 aa17.75■□□□□ 0.43
SCLT1-204ENST00000503215 SLC39A4Q6P5W5 647 aa17.75■□□□□ 0.43
SCLT1-204ENST00000503215 PDXDC1Q6P996 788 aa17.75■□□□□ 0.43
SCLT1-204ENST00000503215 ITFG1Q8TB96 612 aa17.75■□□□□ 0.43
SCLT1-204ENST00000503215 BICD1Q96G01 975 aa17.75■□□□□ 0.43
SCLT1-204ENST00000503215 CCSER1Q9C0I3 900 aa17.75■□□□□ 0.43
SCLT1-204ENST00000503215 IKZF4Q9H2S9 585 aa17.75■□□□□ 0.43
SCLT1-204ENST00000503215 ZHX3Q9H4I2 956 aa17.75■□□□□ 0.43
SCLT1-204ENST00000503215 FAM86C1Q9NVL1 165 aa17.75■□□□□ 0.43
SCLT1-204ENST00000503215 IGSF9Q9P2J2 1179 aa17.75■□□□□ 0.43
SCLT1-204ENST00000503215 FBXO2Q9UK22 296 aaPredicted RBP17.75■□□□□ 0.43
SCLT1-204ENST00000503215 ODF2LQ9ULJ1 636 aa17.75■□□□□ 0.43
SCLT1-204ENST00000503215 TBX20Q9UMR3 447 aa17.75■□□□□ 0.43
SCLT1-204ENST00000503215 POLIQ9UNA4 740 aa17.75■□□□□ 0.43
SCLT1-204ENST00000503215 CITO14578 2027 aa17.74■□□□□ 0.43
SCLT1-204ENST00000503215 TTC26A0AVF1 554 aa17.74■□□□□ 0.43
SCLT1-204ENST00000503215 TISP43B9A030 160 aa17.74■□□□□ 0.43
SCLT1-204ENST00000503215 TRAPPC3O43617 180 aa17.74■□□□□ 0.43
SCLT1-204ENST00000503215 PI15O43692 258 aa17.74■□□□□ 0.43
SCLT1-204ENST00000503215 FAM189A1O60320 539 aa17.74■□□□□ 0.43
SCLT1-204ENST00000503215 TBC1D4O60343 1298 aa17.74■□□□□ 0.43
SCLT1-204ENST00000503215 CFHP08603 1231 aa17.74■□□□□ 0.43
SCLT1-204ENST00000503215 HNRNPA1P09651 372 aaKnown RBP eCLIP17.74■□□□□ 0.43
SCLT1-204ENST00000503215 RPL9P32969 192 aaKnown RBP17.74■□□□□ 0.43
SCLT1-204ENST00000503215 CWF19L1Q69YN2 538 aaKnown RBP17.74■□□□□ 0.43
SCLT1-204ENST00000503215 ANKS3Q6ZW76 656 aa17.74■□□□□ 0.43
SCLT1-204ENST00000503215 RASSF8Q8NHQ8 419 aa17.74■□□□□ 0.43
SCLT1-204ENST00000503215 PARVGQ9HBI0 331 aa17.74■□□□□ 0.43
SCLT1-204ENST00000503215 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.74■□□□□ 0.43
SCLT1-204ENST00000503215 DNMT3BQ9UBC3 853 aaKnown RBP17.74■□□□□ 0.43
SCLT1-204ENST00000503215 DAXXQ9UER7 740 aaPredicted RBP17.74■□□□□ 0.43
SCLT1-204ENST00000503215 KCNG1Q9UIX4 513 aa17.74■□□□□ 0.43
SCLT1-204ENST00000503215 NOTCH4Q99466 2003 aa17.73■□□□□ 0.43
SCLT1-204ENST00000503215 LACTBL1A8MY62 500 aa17.73■□□□□ 0.43
SCLT1-204ENST00000503215 ANKRD63C9JTQ0 380 aa17.73■□□□□ 0.43
SCLT1-204ENST00000503215 ANHXE9PGG2 379 aa17.73■□□□□ 0.43
SCLT1-204ENST00000503215 K7ENM7 598 aa17.73■□□□□ 0.43
SCLT1-204ENST00000503215 TRAK2O60296 914 aa17.73■□□□□ 0.43
SCLT1-204ENST00000503215 KRT18P05783 430 aaKnown RBP17.73■□□□□ 0.43
SCLT1-204ENST00000503215 CLTAP09496 248 aa17.73■□□□□ 0.43
SCLT1-204ENST00000503215 DDIT3P35638 169 aa17.73■□□□□ 0.43
SCLT1-204ENST00000503215 LIG4P49917 911 aa17.73■□□□□ 0.43
SCLT1-204ENST00000503215 PTPN5P54829 565 aa17.73■□□□□ 0.43
SCLT1-204ENST00000503215 ARPP19P56211 112 aa17.73■□□□□ 0.43
SCLT1-204ENST00000503215 ROR1Q01973 937 aa17.73■□□□□ 0.43
SCLT1-204ENST00000503215 HTR4Q13639 388 aa17.73■□□□□ 0.43
SCLT1-204ENST00000503215 MRPL58Q14197 206 aaKnown RBP17.73■□□□□ 0.43
SCLT1-204ENST00000503215 ZBTB6Q15916 424 aa17.73■□□□□ 0.43
SCLT1-204ENST00000503215 ENOX2Q16206 610 aaKnown RBP17.73■□□□□ 0.43
SCLT1-204ENST00000503215 ZC2HC1CQ53FD0 456 aaPredicted RBP17.73■□□□□ 0.43
SCLT1-204ENST00000503215 ASTLQ6HA08 431 aaPredicted RBP17.73■□□□□ 0.43
SCLT1-204ENST00000503215 POTEHQ6S545 545 aa17.73■□□□□ 0.43
SCLT1-204ENST00000503215 SIX5Q8N196 739 aa17.73■□□□□ 0.43
SCLT1-204ENST00000503215 FLCNQ8NFG4 579 aa17.73■□□□□ 0.43
SCLT1-204ENST00000503215 KCNN1Q92952 543 aa17.73■□□□□ 0.43
SCLT1-204ENST00000503215 MTMR6Q9Y217 621 aa17.73■□□□□ 0.43
SCLT1-204ENST00000503215 NUB1Q9Y5A7 615 aa17.73■□□□□ 0.43
SCLT1-204ENST00000503215 WDR27A2RRH5 827 aa17.72■□□□□ 0.43
SCLT1-204ENST00000503215 KRBA1A5PL33 1030 aa17.72■□□□□ 0.43
SCLT1-204ENST00000503215 H0Y858 1186 aa17.72■□□□□ 0.43
SCLT1-204ENST00000503215 SEC24AO95486 1093 aa17.72■□□□□ 0.43
SCLT1-204ENST00000503215 PDCP20941 246 aa17.72■□□□□ 0.43
SCLT1-204ENST00000503215 HOXA9P31269 272 aa17.72■□□□□ 0.43
SCLT1-204ENST00000503215 SLC8B1Q6J4K2 584 aa17.72■□□□□ 0.43
SCLT1-204ENST00000503215 PARM1Q6UWI2 310 aa17.72■□□□□ 0.43
SCLT1-204ENST00000503215 LARP4BQ92615 738 aaKnown RBP17.72■□□□□ 0.43
SCLT1-204ENST00000503215 FGF13Q92913 245 aa17.72■□□□□ 0.43
SCLT1-204ENST00000503215 SUSD3Q96L08 255 aa17.72■□□□□ 0.43
SCLT1-204ENST00000503215 MFSD1Q9H3U5 465 aa17.72■□□□□ 0.43
SCLT1-204ENST00000503215 FBXL5Q9UKA1 691 aa17.72■□□□□ 0.43
SCLT1-204ENST00000503215 FBXL21Q9UKT6 434 aa17.72■□□□□ 0.43
SCLT1-204ENST00000503215 NUMBLQ9Y6R0 609 aa17.72■□□□□ 0.43
SCLT1-204ENST00000503215 A0A0B4J269 797 aa17.71■□□□□ 0.43
SCLT1-204ENST00000503215 H0YCG3 227 aa17.71■□□□□ 0.43
SCLT1-204ENST00000503215 PPEF2O14830 753 aa17.71■□□□□ 0.43
SCLT1-204ENST00000503215 HNRNPDLO14979 420 aaKnown RBP17.71■□□□□ 0.43
SCLT1-204ENST00000503215 SYN3O14994 580 aa17.71■□□□□ 0.43
SCLT1-204ENST00000503215 ABLIM3O94929 683 aa17.71■□□□□ 0.43
SCLT1-204ENST00000503215 PIGRP01833 764 aa17.71■□□□□ 0.43
SCLT1-204ENST00000503215 KCNA4P22459 653 aa17.71■□□□□ 0.43
SCLT1-204ENST00000503215 MCM4P33991 863 aa17.71■□□□□ 0.43
SCLT1-204ENST00000503215 UVSSAQ2YD98 709 aa17.71■□□□□ 0.43
SCLT1-204ENST00000503215 DYMQ7RTS9 669 aa17.71■□□□□ 0.43
SCLT1-204ENST00000503215 ZNF461Q8TAF7 563 aa17.71■□□□□ 0.43
SCLT1-204ENST00000503215 FGF14Q92915 247 aa17.71■□□□□ 0.43
SCLT1-204ENST00000503215 KIF12Q96FN5 646 aa17.71■□□□□ 0.43
SCLT1-204ENST00000503215 USP28Q96RU2 1077 aa17.71■□□□□ 0.43
SCLT1-204ENST00000503215 PANK2Q9BZ23 570 aa17.71■□□□□ 0.43
SCLT1-204ENST00000503215 PLEKHA5Q9HAU0 1116 aa17.71■□□□□ 0.43
SCLT1-204ENST00000503215 CDH7Q9ULB5 785 aa17.71■□□□□ 0.43
SCLT1-204ENST00000503215 TIMM13Q9Y5L4 95 aaPredicted RBP17.71■□□□□ 0.43
SCLT1-204ENST00000503215 SRPRBQ9Y5M8 271 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms