RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 RANBP17Q9H2T7 1088 aaKnown RBP11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 ACAD9Q9H845 621 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 UBE2TQ9NPD8 197 aaPredicted RBP11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 STK39Q9UEW8 545 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 STOML2Q9UJZ1 356 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 YTHDC2Q9H6S0 1430 aaKnown RBP11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 GRID2IPA4D2P6 1211 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 RNMTO43148 476 aaKnown RBP11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 SPAG6O75602 509 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 CYP2C19P33261 490 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 ACTR2P61160 394 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 DSG1Q02413 1049 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 UGT3A1Q6NUS8 523 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 DSTYKQ6XUX3 929 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 CCDC81Q6ZN84 652 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 PLBD2Q8NHP8 589 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 GPR101Q96P66 508 aaPredicted RBP11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 LATS2Q9NRM7 1088 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 RHBDL2Q9NX52 303 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 PFASO15067 1338 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 NFIL3Q16649 462 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 EFHC2Q5JST6 749 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 PLEKHA7Q6IQ23 1121 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 RIN3Q8TB24 985 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 DSCC1Q9BVC3 393 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 SLC39A2Q9NP94 309 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 NXF1Q9UBU9 619 aaKnown RBP11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 SH3TC1Q8TE82 1336 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 EDC4Q6P2E9 1401 aaKnown RBP11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 COL17A1Q9UMD9 1497 aaPredicted RBP11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 H2AFYO75367 372 aaKnown RBP11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 SKP1P63208 163 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 CRYMQ14894 314 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 LPIN2Q92539 896 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 TMA16Q96EY4 203 aaKnown RBP11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 EYA1Q99502 592 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 AMNQ9BXJ7 453 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 SLC13A1Q9BZW2 595 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 TRPC4Q9UBN4 977 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 ATP6V1HQ9UI12 483 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 A0A1W2PP64 1363 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 CTTNBP2Q8WZ74 1663 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 MYL12AP19105 171 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 FEN1P39748 380 aaKnown RBP11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 PPP3CCP48454 512 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 CASP4P49662 377 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 KCNK10P57789 538 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 ALDH6A1Q02252 535 aaKnown RBP11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 PTPN12Q05209 780 aaKnown RBP11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 GALNT3Q14435 633 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 ZCWPW2Q504Y3 356 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 ZNF667Q5HYK9 610 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 ULK2Q8IYT8 1036 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 KBTBD3Q8NAB2 608 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 PRKD2Q9BZL6 878 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 TJP2Q9UDY2 1190 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 MTO1Q9Y2Z2 717 aaKnown RBP11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 ATP9AO75110 1047 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 MYBL1P10243 752 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 ZNF394Q53GI3 561 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 ASPRV1Q53RT3 343 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 ALFQ53S48 1182 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 SVOPQ8N4V2 548 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 PPM1NQ8N819 430 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 PJA1Q8NG27 643 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 ZWILCHQ9H900 591 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 GTF2A1LQ9UNN4 478 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 K7ERI5 159 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 ATP1A1P05023 1023 aaKnown RBP11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 SERPINB9P50453 376 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 TGM3Q08188 693 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 ZNF654Q8IZM8 581 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 CCDC185Q8N715 623 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 JARID2Q92833 1246 aaPredicted RBP11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 FAR2Q96K12 515 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 CXorf56Q9H5V9 222 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 CAAP1Q9H8G2 361 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 XPO7Q9UIA9 1087 aaKnown RBP11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 IRAK3Q9Y616 596 aa11.71□□□□□ -0.53
AC055713.1-201ENST00000498967 RPS7P62081 194 aaKnown RBP11.71□□□□□ -0.54
AC055713.1-201ENST00000498967 CCDC144BQ3MJ40 725 aa11.71□□□□□ -0.54
AC055713.1-201ENST00000498967 TAS2R42Q7RTR8 314 aa11.71□□□□□ -0.54
AC055713.1-201ENST00000498967 SHCBP1Q8NEM2 672 aa11.71□□□□□ -0.54
AC055713.1-201ENST00000498967 ZNF483Q8TF39 744 aaPredicted RBP11.71□□□□□ -0.54
AC055713.1-201ENST00000498967 ZNF532Q9HCE3 1301 aa11.71□□□□□ -0.54
AC055713.1-201ENST00000498967 EMC3Q9P0I2 261 aa11.71□□□□□ -0.54
AC055713.1-201ENST00000498967 SERTAD1Q9UHV2 236 aa11.71□□□□□ -0.54
AC055713.1-201ENST00000498967 MGRN1O60291 552 aa11.71□□□□□ -0.54
AC055713.1-201ENST00000498967 KRT34O76011 436 aa11.71□□□□□ -0.54
AC055713.1-201ENST00000498967 SCGNO76038 276 aa11.71□□□□□ -0.54
AC055713.1-201ENST00000498967 CYBBP04839 570 aa11.71□□□□□ -0.54
AC055713.1-201ENST00000498967 QARSP47897 775 aaKnown RBP11.71□□□□□ -0.54
AC055713.1-201ENST00000498967 EIF2B2P49770 351 aaKnown RBP11.71□□□□□ -0.54
AC055713.1-201ENST00000498967 ITGADQ13349 1161 aa11.71□□□□□ -0.54
AC055713.1-201ENST00000498967 KYAT1Q16773 422 aa11.71□□□□□ -0.54
AC055713.1-201ENST00000498967 ACCSLQ4AC99 568 aa11.71□□□□□ -0.54
AC055713.1-201ENST00000498967 ZRANB3Q5FWF4 1079 aa11.71□□□□□ -0.54
AC055713.1-201ENST00000498967 VMP1Q96GC9 406 aa11.71□□□□□ -0.54
AC055713.1-201ENST00000498967 PIDD1Q9HB75 910 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms