RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 FAM212AQ96EL1 285 aa17.53■□□□□ 0.4
LMNA-217ENST00000498722 SNX27Q96L92 541 aa17.53■□□□□ 0.4
LMNA-217ENST00000498722 TCF25Q9BQ70 676 aa17.53■□□□□ 0.4
LMNA-217ENST00000498722 STRA6Q9BX79 667 aa17.53■□□□□ 0.4
LMNA-217ENST00000498722 LIMA1Q9UHB6 759 aaKnown RBP17.53■□□□□ 0.4
LMNA-217ENST00000498722 LZTS1Q9Y250 596 aa17.53■□□□□ 0.4
LMNA-217ENST00000498722 ZKSCAN5Q9Y2L8 839 aa17.53■□□□□ 0.4
LMNA-217ENST00000498722 PCDHGC5Q9Y5F6 944 aa17.53■□□□□ 0.4
LMNA-217ENST00000498722 A0A0B4J269 797 aa17.52■□□□□ 0.4
LMNA-217ENST00000498722 TRIM49BA6NDI0 452 aa17.52■□□□□ 0.4
LMNA-217ENST00000498722 ESPNB1AK53 854 aa17.52■□□□□ 0.4
LMNA-217ENST00000498722 EEF1GP26641 437 aaKnown RBP17.52■□□□□ 0.4
LMNA-217ENST00000498722 IRS1P35568 1242 aa17.52■□□□□ 0.4
LMNA-217ENST00000498722 PPP2R3AQ06190 1150 aa17.52■□□□□ 0.4
LMNA-217ENST00000498722 CAMK1Q14012 370 aa17.52■□□□□ 0.4
LMNA-217ENST00000498722 BMS1Q14692 1282 aaKnown RBP17.52■□□□□ 0.4
LMNA-217ENST00000498722 TCEAL5Q5H9L2 206 aa17.52■□□□□ 0.4
LMNA-217ENST00000498722 CCDC186Q7Z3E2 898 aa17.52■□□□□ 0.4
LMNA-217ENST00000498722 VPS52Q8N1B4 723 aa17.52■□□□□ 0.4
LMNA-217ENST00000498722 BCL7CQ8WUZ0 217 aaPredicted RBP17.52■□□□□ 0.4
LMNA-217ENST00000498722 COLEC11Q9BWP8 271 aa17.52■□□□□ 0.4
LMNA-217ENST00000498722 IGFLR1Q9H665 355 aa17.52■□□□□ 0.4
LMNA-217ENST00000498722 TMEM206Q9H813 350 aa17.52■□□□□ 0.4
LMNA-217ENST00000498722 RPF1Q9H9Y2 349 aaKnown RBP17.52■□□□□ 0.4
LMNA-217ENST00000498722 AGO2Q9UKV8 859 aaKnown RBP17.52■□□□□ 0.4
LMNA-217ENST00000498722 VWA8A3KMH1 1905 aa17.51■□□□□ 0.39
LMNA-217ENST00000498722 A0A1B0GTH6 734 aa17.51■□□□□ 0.39
LMNA-217ENST00000498722 SMIM28A0A1B0GU29 152 aa17.51■□□□□ 0.39
LMNA-217ENST00000498722 KCNJ18B7U540 433 aa17.51■□□□□ 0.39
LMNA-217ENST00000498722 EIF3DO15371 548 aaKnown RBP eCLIP17.51■□□□□ 0.39
LMNA-217ENST00000498722 TPM2P07951 284 aa17.51■□□□□ 0.39
LMNA-217ENST00000498722 ACOT2P49753 483 aa17.51■□□□□ 0.39
LMNA-217ENST00000498722 ERVFC1P60507 584 aa17.51■□□□□ 0.39
LMNA-217ENST00000498722 KCNJ12Q14500 433 aa17.51■□□□□ 0.39
LMNA-217ENST00000498722 HSP90AA4PQ58FG1 418 aa17.51■□□□□ 0.39
LMNA-217ENST00000498722 TCP11X2Q5H9J9 407 aa17.51■□□□□ 0.39
LMNA-217ENST00000498722 ZBTB41Q5SVQ8 909 aa17.51■□□□□ 0.39
LMNA-217ENST00000498722 TMC6Q7Z403 805 aa17.51■□□□□ 0.39
LMNA-217ENST00000498722 RBM23Q86U06 439 aaKnown RBP17.51■□□□□ 0.39
LMNA-217ENST00000498722 NELFCDQ8IXH7 590 aa17.51■□□□□ 0.39
LMNA-217ENST00000498722 CSGALNACT2Q8N6G5 542 aa17.51■□□□□ 0.39
LMNA-217ENST00000498722 HASPINQ8TF76 798 aa17.51■□□□□ 0.39
LMNA-217ENST00000498722 SRRTQ9BXP5 876 aaKnown RBP17.51■□□□□ 0.39
LMNA-217ENST00000498722 SLC38A7Q9NVC3 462 aa17.51■□□□□ 0.39
LMNA-217ENST00000498722 LRRC10BA6NIK2 292 aa17.5■□□□□ 0.39
LMNA-217ENST00000498722 F8W810 466 aa17.5■□□□□ 0.39
LMNA-217ENST00000498722 HSP90AA2PQ14568 343 aaPredicted RBP17.5■□□□□ 0.39
LMNA-217ENST00000498722 SMC1AQ14683 1233 aaKnown RBP17.5■□□□□ 0.39
LMNA-217ENST00000498722 SLC10A6Q3KNW5 377 aa17.5■□□□□ 0.39
LMNA-217ENST00000498722 ANKRD40Q6AI12 368 aa17.5■□□□□ 0.39
LMNA-217ENST00000498722 PDE12Q6L8Q7 609 aaKnown RBP17.5■□□□□ 0.39
LMNA-217ENST00000498722 ARMCX5Q6P1M9 558 aa17.5■□□□□ 0.39
LMNA-217ENST00000498722 DDX53Q86TM3 631 aaKnown RBP17.5■□□□□ 0.39
LMNA-217ENST00000498722 VSTM4Q8IW00 320 aa17.5■□□□□ 0.39
LMNA-217ENST00000498722 NAP1L5Q96NT1 182 aaPredicted RBP17.5■□□□□ 0.39
LMNA-217ENST00000498722 PPP1R10Q96QC0 940 aaKnown RBP17.5■□□□□ 0.39
LMNA-217ENST00000498722 DUSP9Q99956 384 aaKnown RBP17.5■□□□□ 0.39
LMNA-217ENST00000498722 PAAF1Q9BRP4 392 aa17.5■□□□□ 0.39
LMNA-217ENST00000498722 PCIF1Q9H4Z3 704 aa17.5■□□□□ 0.39
LMNA-217ENST00000498722 GOLGA2P5Q9HBQ8 144 aa17.5■□□□□ 0.39
LMNA-217ENST00000498722 PRDM6Q9NQX0 595 aa17.5■□□□□ 0.39
LMNA-217ENST00000498722 CNTN3Q9P232 1028 aa17.5■□□□□ 0.39
LMNA-217ENST00000498722 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.5■□□□□ 0.39
LMNA-217ENST00000498722 UBE4BO95155 1302 aa17.5■□□□□ 0.39
LMNA-217ENST00000498722 TCF20Q9UGU0 1960 aaKnown RBP17.5■□□□□ 0.39
LMNA-217ENST00000498722 TADA2AO75478 443 aa17.49■□□□□ 0.39
LMNA-217ENST00000498722 NRIP1P48552 1158 aa17.49■□□□□ 0.39
LMNA-217ENST00000498722 PMS1P54277 932 aaKnown RBP17.49■□□□□ 0.39
LMNA-217ENST00000498722 NR1I3Q14994 352 aa17.49■□□□□ 0.39
LMNA-217ENST00000498722 ALKAL1Q6UXT8 129 aa17.49■□□□□ 0.39
LMNA-217ENST00000498722 ADGRD2Q7Z7M1 963 aa17.49■□□□□ 0.39
LMNA-217ENST00000498722 CCDC150Q8NCX0 1101 aa17.49■□□□□ 0.39
LMNA-217ENST00000498722 SAAL1Q96ER3 474 aa17.49■□□□□ 0.39
LMNA-217ENST00000498722 KIF12Q96FN5 646 aa17.49■□□□□ 0.39
LMNA-217ENST00000498722 ZMAT2Q96NC0 199 aaKnown RBP17.49■□□□□ 0.39
LMNA-217ENST00000498722 FAM213AQ9BRX8 229 aa17.49■□□□□ 0.39
LMNA-217ENST00000498722 TLE6Q9H808 572 aa17.49■□□□□ 0.39
LMNA-217ENST00000498722 NGRNQ9NPE2 291 aaKnown RBP17.49■□□□□ 0.39
LMNA-217ENST00000498722 MARCH5Q9NX47 278 aa17.49■□□□□ 0.39
LMNA-217ENST00000498722 ADAM28Q9UKQ2 775 aa17.49■□□□□ 0.39
LMNA-217ENST00000498722 STYXL1Q9Y6J8 313 aa17.49■□□□□ 0.39
LMNA-217ENST00000498722 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.48■□□□□ 0.39
LMNA-217ENST00000498722 GOLGA8IPA6NC78 632 aa17.48■□□□□ 0.39
LMNA-217ENST00000498722 GOLGA8JA6NMD2 632 aa17.48■□□□□ 0.39
LMNA-217ENST00000498722 LACTBL1A8MY62 500 aa17.48■□□□□ 0.39
LMNA-217ENST00000498722 C2CD2LO14523 706 aa17.48■□□□□ 0.39
LMNA-217ENST00000498722 FAM189A1O60320 539 aa17.48■□□□□ 0.39
LMNA-217ENST00000498722 KIF4AO95239 1232 aa17.48■□□□□ 0.39
LMNA-217ENST00000498722 KCNE1P15382 129 aa17.48■□□□□ 0.39
LMNA-217ENST00000498722 ADSSP30520 456 aa17.48■□□□□ 0.39
LMNA-217ENST00000498722 COPB1P53618 953 aaKnown RBP17.48■□□□□ 0.39
LMNA-217ENST00000498722 KRT31Q15323 416 aa17.48■□□□□ 0.39
LMNA-217ENST00000498722 NAB2Q15742 525 aa17.48■□□□□ 0.39
LMNA-217ENST00000498722 ENOX2Q16206 610 aaKnown RBP17.48■□□□□ 0.39
LMNA-217ENST00000498722 KIAA1841Q6NSI8 718 aa17.48■□□□□ 0.39
LMNA-217ENST00000498722 EPM2AIP1Q7L775 607 aaPredicted RBP17.48■□□□□ 0.39
LMNA-217ENST00000498722 APTXQ7Z2E3 356 aaKnown RBP17.48■□□□□ 0.39
LMNA-217ENST00000498722 FILIP1Q7Z7B0 1213 aa17.48■□□□□ 0.39
LMNA-217ENST00000498722 ZNF507Q8TCN5 953 aa17.48■□□□□ 0.39
LMNA-217ENST00000498722 SCFD1Q8WVM8 642 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms