RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 ZNF318Q5VUA4 2279 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 CLUHO75153 1309 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 TSC2P49815 1807 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 NOTCH4Q99466 2003 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 HNRNPDLO14979 420 aaKnown RBP9.25□□□□□ -0.93
HMGXB4-207ENST00000498212 MEFVO15553 781 aaPredicted RBP9.25□□□□□ -0.93
HMGXB4-207ENST00000498212 ZMYND10O75800 440 aa9.25□□□□□ -0.93
HMGXB4-207ENST00000498212 PIGRP01833 764 aa9.25□□□□□ -0.93
HMGXB4-207ENST00000498212 ASGR2P07307 311 aa9.25□□□□□ -0.93
HMGXB4-207ENST00000498212 CXCL8P10145 99 aa9.25□□□□□ -0.93
HMGXB4-207ENST00000498212 IGFBP6P24592 240 aaPredicted RBP9.25□□□□□ -0.93
HMGXB4-207ENST00000498212 TKTP29401 623 aaKnown RBP9.25□□□□□ -0.93
HMGXB4-207ENST00000498212 GBP2P32456 591 aaPredicted RBP9.25□□□□□ -0.93
HMGXB4-207ENST00000498212 RPL9P32969 192 aaKnown RBP9.25□□□□□ -0.93
HMGXB4-207ENST00000498212 ABCD1P33897 745 aa9.25□□□□□ -0.93
HMGXB4-207ENST00000498212 OR1D2P34982 312 aa9.25□□□□□ -0.93
HMGXB4-207ENST00000498212 KYAT1Q16773 422 aa9.25□□□□□ -0.93
HMGXB4-207ENST00000498212 LIN9Q5TKA1 542 aa9.25□□□□□ -0.93
HMGXB4-207ENST00000498212 ANKS3Q6ZW76 656 aa9.25□□□□□ -0.93
HMGXB4-207ENST00000498212 USP49Q70CQ1 688 aa9.25□□□□□ -0.93
HMGXB4-207ENST00000498212 FBXL6Q8N531 539 aa9.25□□□□□ -0.93
HMGXB4-207ENST00000498212 KRI1Q8N9T8 703 aaKnown RBP9.25□□□□□ -0.93
HMGXB4-207ENST00000498212 C18orf25Q96B23 403 aaPredicted RBP9.25□□□□□ -0.93
HMGXB4-207ENST00000498212 CLIC6Q96NY7 704 aa9.25□□□□□ -0.93
HMGXB4-207ENST00000498212 USP28Q96RU2 1077 aa9.25□□□□□ -0.93
HMGXB4-207ENST00000498212 HAPLN2Q9GZV7 340 aa9.25□□□□□ -0.93
HMGXB4-207ENST00000498212 KCNH6Q9H252 994 aa9.25□□□□□ -0.93
HMGXB4-207ENST00000498212 PLEKHA5Q9HAU0 1116 aa9.25□□□□□ -0.93
HMGXB4-207ENST00000498212 MTRRQ9UBK8 725 aa9.25□□□□□ -0.93
HMGXB4-207ENST00000498212 NUB1Q9Y5A7 615 aa9.25□□□□□ -0.93
HMGXB4-207ENST00000498212 I3L4J1 428 aa9.24□□□□□ -0.93
HMGXB4-207ENST00000498212 ADAM12O43184 909 aa9.24□□□□□ -0.93
HMGXB4-207ENST00000498212 N4BP1O75113 896 aaKnown RBP9.24□□□□□ -0.93
HMGXB4-207ENST00000498212 C8AP07357 584 aa9.24□□□□□ -0.93
HMGXB4-207ENST00000498212 CLTAP09496 248 aa9.24□□□□□ -0.93
HMGXB4-207ENST00000498212 HNRNPA1P09651 372 aaKnown RBP eCLIP9.24□□□□□ -0.93
HMGXB4-207ENST00000498212 NMT1P30419 496 aaKnown RBP9.24□□□□□ -0.93
HMGXB4-207ENST00000498212 HOXA9P31269 272 aa9.24□□□□□ -0.93
HMGXB4-207ENST00000498212 MCM4P33991 863 aa9.24□□□□□ -0.93
HMGXB4-207ENST00000498212 TNFSF9P41273 254 aa9.24□□□□□ -0.93
HMGXB4-207ENST00000498212 GTF2BQ00403 316 aa9.24□□□□□ -0.93
HMGXB4-207ENST00000498212 PPP2R3AQ06190 1150 aa9.24□□□□□ -0.93
HMGXB4-207ENST00000498212 RAB33AQ14088 237 aa9.24□□□□□ -0.93
HMGXB4-207ENST00000498212 SLC39A14Q15043 492 aa9.24□□□□□ -0.93
HMGXB4-207ENST00000498212 PPM1LQ5SGD2 360 aa9.24□□□□□ -0.93
HMGXB4-207ENST00000498212 RRAGBQ5VZM2 374 aa9.24□□□□□ -0.93
HMGXB4-207ENST00000498212 DYMQ7RTS9 669 aa9.24□□□□□ -0.93
HMGXB4-207ENST00000498212 SNX21Q969T3 373 aa9.24□□□□□ -0.93
HMGXB4-207ENST00000498212 FIZ1Q96SL8 496 aa9.24□□□□□ -0.93
HMGXB4-207ENST00000498212 SMOC2Q9H3U7 446 aa9.24□□□□□ -0.93
HMGXB4-207ENST00000498212 BACE2Q9Y5Z0 518 aa9.24□□□□□ -0.93
HMGXB4-207ENST00000498212 CDY1Q9Y6F8 540 aa9.24□□□□□ -0.93
HMGXB4-207ENST00000498212 MORC2Q9Y6X9 1032 aaPredicted RBP9.24□□□□□ -0.93
HMGXB4-207ENST00000498212 SCN1AP35498 2009 aa9.24□□□□□ -0.93
HMGXB4-207ENST00000498212 TRIOO75962 3097 aa9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 A0A0B4J269 797 aa9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 TTC26A0AVF1 554 aa9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 SYN3O14994 580 aa9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 OGTO15294 1046 aa9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 XPOTO43592 962 aaKnown RBP9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 FAM189A1O60320 539 aa9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 XYLBO75191 536 aa9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 NASPP49321 788 aaPredicted RBP9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 SPAG1Q07617 926 aa9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 TDGQ13569 410 aa9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 UVSSAQ2YD98 709 aa9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 ZC2HC1CQ53FD0 456 aaPredicted RBP9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 VARS2Q5ST30 1063 aaKnown RBP9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 AXDND1Q5T1B0 1012 aaPredicted RBP9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 SLC39A4Q6P5W5 647 aa9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 RSPO2Q6UXX9 243 aaPredicted RBP9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 CCDC73Q6ZRK6 1079 aa9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 SV2BQ7L1I2 683 aa9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 GET4Q7L5D6 327 aaPredicted RBP9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 GRASPQ7Z6J2 395 aaPredicted RBP9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 SFR1Q86XK3 245 aa9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 MAP4K3Q8IVH8 894 aa9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 HSCBQ8IWL3 235 aa9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 SLC7A14Q8TBB6 771 aa9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 DDX12PQ92771 950 aa9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 SUSD3Q96L08 255 aa9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 MYADMQ96S97 322 aa9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 MSTO1Q9BUK6 570 aa9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 ST6GALNAC4Q9H4F1 302 aa9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 RPF1Q9H9Y2 349 aaKnown RBP9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 KCNK12Q9HB15 430 aa9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 IGSF9Q9P2J2 1179 aa9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 EPS15L1Q9UBC2 864 aa9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 TUBGCP4Q9UGJ1 667 aa9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 UBQLN1Q9UMX0 589 aaKnown RBP9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.23□□□□□ -0.93
HMGXB4-207ENST00000498212 WDR27A2RRH5 827 aa9.22□□□□□ -0.93
HMGXB4-207ENST00000498212 MYMKA6NI61 221 aa9.22□□□□□ -0.93
HMGXB4-207ENST00000498212 LACTBL1A8MY62 500 aa9.22□□□□□ -0.93
HMGXB4-207ENST00000498212 H7C4K7 107 aa9.22□□□□□ -0.93
HMGXB4-207ENST00000498212 CCL16O15467 120 aa9.22□□□□□ -0.93
HMGXB4-207ENST00000498212 PDGFBP01127 241 aaPredicted RBP9.22□□□□□ -0.93
HMGXB4-207ENST00000498212 HSP90AA1P07900 732 aaKnown RBP9.22□□□□□ -0.93
HMGXB4-207ENST00000498212 CYP3A5P20815 502 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms