RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 TNFAIP3P21580 790 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 FGFR4P22455 802 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 GJA9P57773 515 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 TFAMQ00059 246 aaKnown RBP8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 TRIM32Q13049 653 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 CUL2Q13617 745 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 TUBB2AQ13885 445 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 IFI16Q16666 785 aaKnown RBP8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 KYAT1Q16773 422 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 ZNF699Q32M78 642 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 TAF3Q5VWG9 929 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 SPOPLQ6IQ16 392 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 SCARA5Q6ZMJ2 495 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 H2AFVQ71UI9 128 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 CATSPER4Q7RTX7 472 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 FAM71AQ8IYT1 594 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 RPUSD2Q8IZ73 545 aaKnown RBP8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 KIAA0319LQ8IZA0 1049 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 C7orf31Q8N865 590 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 CD99L2Q8TCZ2 262 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 CTNNBL1Q8WYA6 563 aaPredicted RBP8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 TATDN2Q93075 761 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 ELMO3Q96BJ8 720 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 ARID3AQ99856 593 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 AGPAT1Q99943 283 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 SYT11Q9BT88 431 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 TUBB2BQ9BVA1 445 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 CARD6Q9BX69 1037 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 XPNPEP3Q9NQH7 507 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 NOCTQ9UK39 431 aaKnown RBP8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 INTUQ9ULD6 942 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 UMODL1Q5DID0 1318 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 MROH7Q68CQ1 1323 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 TMCO5BA8MYB1 307 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 M0QZ92 97 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 GPR25O00155 361 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 ENC1O14682 589 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 CYP26A1O43174 497 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 TREHO43280 583 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 B4GALT4O60513 344 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 TADA3O75528 432 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 NPTXRO95502 500 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 PGK1P00558 417 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 STAG3L1P0CL83 205 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 ELNP15502 786 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 ABCB4P21439 1286 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 HOXC8P31273 242 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 CDC42EP1Q00587 391 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 AMPD2Q01433 879 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 CKAP4Q07065 602 aaKnown RBP8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 CACNB2Q08289 660 aaPredicted RBP8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 TRPC3Q13507 836 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 TMEM132DQ14C87 1099 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 PCBP1Q15365 356 aaKnown RBP eCLIP8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 WHAMMP3Q1A5X7 153 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 FNDC1Q4ZHG4 1894 aaPredicted RBP8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 FAM47CQ5HY64 1035 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 TEX35Q5T0J7 233 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 NOTUMQ6P988 496 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 SLC27A1Q6PCB7 646 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 TRAPPC11Q7Z392 1133 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 NOP9Q86U38 636 aaKnown RBP8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 TMEM192Q8IY95 271 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 RNF10Q8N5U6 811 aaKnown RBP8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 CEP112Q8N8E3 955 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 LRRN4CLQ8ND94 238 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 CAGE1Q8TC20 777 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 DNAJB3Q8WWF6 145 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 RFFLQ8WZ73 363 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 CCDC94Q9BW85 323 aaPredicted RBP8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 CFHR5Q9BXR6 569 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 KIAA1671Q9BY89 1806 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 NIF3L1Q9GZT8 377 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 ADAMTS10Q9H324 1103 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 APOBEC3GQ9HC16 384 aaKnown RBP8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 HDAC6Q9UBN7 1215 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 CDC23Q9UJX2 597 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 HYOU1Q9Y4L1 999 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 DUSP10Q9Y6W6 482 aa8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 V9GYY5 206 aaPredicted RBP8.67□□□□□ -1.02
PDZRN3-212ENST00000498048 A0A0A6YYK5 440 aaPredicted RBP8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 GRID2IPA4D2P6 1211 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 ADAMTS4O75173 837 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 GPR32O75388 356 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 SGPL1O95470 568 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 ASS1P00966 412 aaKnown RBP8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 MMEP08473 750 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 KRT19P08727 400 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 TMEM253P0C7T8 217 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 DARSP14868 501 aaKnown RBP8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 CYP11B1P15538 503 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 HOXD10P28358 340 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 CCND3P30281 292 aaPredicted RBP8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 GRM5P41594 1212 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 YWHAEP62258 255 aaKnown RBP8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 ADAM17P78536 824 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 ZNF200P98182 395 aaPredicted RBP8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 CAP1Q01518 475 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 FMO1Q01740 532 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms