RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 KLHDC4Q8TBB5 520 aa5.06□□□□□ -1.6
SMC4-225ENST00000497203 CACTINQ8WUQ7 758 aaKnown RBP5.06□□□□□ -1.6
SMC4-225ENST00000497203 CEP95Q96GE4 821 aa5.06□□□□□ -1.6
SMC4-225ENST00000497203 CLPTM1LQ96KA5 538 aa5.06□□□□□ -1.6
SMC4-225ENST00000497203 B3GNT5Q9BYG0 378 aa5.06□□□□□ -1.6
SMC4-225ENST00000497203 SENP6Q9GZR1 1112 aaPredicted RBP5.06□□□□□ -1.6
SMC4-225ENST00000497203 TMEM140Q9NV12 185 aa5.06□□□□□ -1.6
SMC4-225ENST00000497203 AURKAIP1Q9NWT8 199 aaPredicted RBP5.06□□□□□ -1.6
SMC4-225ENST00000497203 PCDHB1Q9Y5F3 818 aa5.06□□□□□ -1.6
SMC4-225ENST00000497203 XDHP47989 1333 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 TEX33O43247 280 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 IFIT2P09913 472 aaKnown RBP5.05□□□□□ -1.6
SMC4-225ENST00000497203 MYBP10242 640 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 C6P13671 934 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 IL2RBP14784 551 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 TACR2P21452 398 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 SREBF1P36956 1147 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 SLC6A9P48067 706 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 AGFG1P52594 562 aaKnown RBP5.05□□□□□ -1.6
SMC4-225ENST00000497203 HK3P52790 923 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 PTTG1IPP53801 180 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 PTH1RQ03431 593 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 NOGQ13253 232 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 LLGL1Q15334 1064 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 CSRP2Q16527 193 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 KIAA0753Q2KHM9 967 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 DCAF17Q5H9S7 520 aaPredicted RBP5.05□□□□□ -1.6
SMC4-225ENST00000497203 NAIF1Q69YI7 327 aaPredicted RBP5.05□□□□□ -1.6
SMC4-225ENST00000497203 IGFL4Q6B9Z1 124 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 NPNTQ6UXI9 565 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 DOK3Q7L591 496 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 GPRIN1Q7Z2K8 1008 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 FAM83AQ86UY5 434 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 TRMT2AQ8IZ69 625 aaKnown RBP5.05□□□□□ -1.6
SMC4-225ENST00000497203 FAM156AQ8NDB6 213 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 OR52N2Q8NGI0 321 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 CASKIN2Q8WXE0 1202 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 TMX3Q96JJ7 454 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 PLEKHG4BQ96PX9 1271 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 RPS6KC1Q96S38 1066 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 PDCD2LQ9BRP1 358 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 ZNF703Q9H7S9 590 aaPredicted RBP5.05□□□□□ -1.6
SMC4-225ENST00000497203 LMBRD1Q9NUN5 540 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 FAM50BQ9Y247 325 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 SIK3Q9Y2K2 1263 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 NR2E3Q9Y5X4 410 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 COMMD10Q9Y6G5 202 aa5.05□□□□□ -1.6
SMC4-225ENST00000497203 MYBBP1AQ9BQG0 1328 aaKnown RBP5.04□□□□□ -1.6
SMC4-225ENST00000497203 A0A088AWK7 358 aa5.04□□□□□ -1.6
SMC4-225ENST00000497203 A6NNZ2 444 aa5.04□□□□□ -1.6
SMC4-225ENST00000497203 GRXCR1A8MXD5 290 aa5.04□□□□□ -1.6
SMC4-225ENST00000497203 GOLGA6L6A8MZA4 724 aa5.04□□□□□ -1.6
SMC4-225ENST00000497203 GOLIM4O00461 696 aa5.04□□□□□ -1.6
SMC4-225ENST00000497203 TPD52L2O43399 206 aaKnown RBP5.04□□□□□ -1.6
SMC4-225ENST00000497203 MGEA5O60502 916 aa5.04□□□□□ -1.6
SMC4-225ENST00000497203 GPR32O75388 356 aa5.04□□□□□ -1.6
SMC4-225ENST00000497203 FTH1P19P0C7X4 201 aa5.04□□□□□ -1.6
SMC4-225ENST00000497203 DDCP20711 480 aa5.04□□□□□ -1.6
SMC4-225ENST00000497203 SLC25A3Q00325 362 aa5.04□□□□□ -1.6
SMC4-225ENST00000497203 TARDBPQ13148 414 aaKnown RBP eCLIP5.04□□□□□ -1.6
SMC4-225ENST00000497203 TOB2Q14106 344 aaPredicted RBP5.04□□□□□ -1.6
SMC4-225ENST00000497203 FGL2Q14314 439 aa5.04□□□□□ -1.6
SMC4-225ENST00000497203 RNF220Q5VTB9 566 aa5.04□□□□□ -1.6
SMC4-225ENST00000497203 CCHCR1Q8TD31 782 aa5.04□□□□□ -1.6
SMC4-225ENST00000497203 PMM1Q92871 262 aa5.04□□□□□ -1.6
SMC4-225ENST00000497203 MRGPRX4Q96LA9 322 aa5.04□□□□□ -1.6
SMC4-225ENST00000497203 MPHOSPH6Q99547 160 aaKnown RBP5.04□□□□□ -1.6
SMC4-225ENST00000497203 LRFN3Q9BTN0 628 aa5.04□□□□□ -1.6
SMC4-225ENST00000497203 ZNF341Q9BYN7 854 aa5.04□□□□□ -1.6
SMC4-225ENST00000497203 KCNH6Q9H252 994 aa5.04□□□□□ -1.6
SMC4-225ENST00000497203 WDR26Q9H7D7 661 aa5.04□□□□□ -1.6
SMC4-225ENST00000497203 MOCS1Q9NZB8 636 aa5.04□□□□□ -1.6
SMC4-225ENST00000497203 SRRDQ9UH36 339 aa5.04□□□□□ -1.6
SMC4-225ENST00000497203 FEZ2Q9UHY8 353 aaPredicted RBP5.04□□□□□ -1.6
SMC4-225ENST00000497203 L1RE1Q9UN81 338 aa5.04□□□□□ -1.6
SMC4-225ENST00000497203 NPIPB8E9PQR5 432 aa5.03□□□□□ -1.6
SMC4-225ENST00000497203 APAF1O14727 1248 aa5.03□□□□□ -1.6
SMC4-225ENST00000497203 PMM2O15305 246 aa5.03□□□□□ -1.6
SMC4-225ENST00000497203 FAM20BO75063 409 aa5.03□□□□□ -1.6
SMC4-225ENST00000497203 SMARCA1P28370 1054 aa5.03□□□□□ -1.6
SMC4-225ENST00000497203 GUCY1A2P33402 732 aa5.03□□□□□ -1.6
SMC4-225ENST00000497203 PTPN7P35236 360 aa5.03□□□□□ -1.6
SMC4-225ENST00000497203 CTXN1P60606 82 aa5.03□□□□□ -1.6
SMC4-225ENST00000497203 TLE1Q04724 770 aa5.03□□□□□ -1.6
SMC4-225ENST00000497203 SP140Q13342 867 aa5.03□□□□□ -1.6
SMC4-225ENST00000497203 SEMA5AQ13591 1074 aa5.03□□□□□ -1.6
SMC4-225ENST00000497203 CNN3Q15417 329 aaKnown RBP5.03□□□□□ -1.6
SMC4-225ENST00000497203 VPS72Q15906 364 aa5.03□□□□□ -1.6
SMC4-225ENST00000497203 KHDC1Q4VXA5 237 aaKnown RBP5.03□□□□□ -1.6
SMC4-225ENST00000497203 METTL24Q5JXM2 366 aa5.03□□□□□ -1.6
SMC4-225ENST00000497203 IL31Q6EBC2 164 aa5.03□□□□□ -1.6
SMC4-225ENST00000497203 MAEAQ7L5Y9 396 aa5.03□□□□□ -1.6
SMC4-225ENST00000497203 HEATR3Q7Z4Q2 680 aa5.03□□□□□ -1.6
SMC4-225ENST00000497203 SLC35B2Q8TB61 432 aa5.03□□□□□ -1.6
SMC4-225ENST00000497203 LRTOMTQ8WZ04 291 aa5.03□□□□□ -1.6
SMC4-225ENST00000497203 WDCPQ9H6R7 721 aa5.03□□□□□ -1.6
SMC4-225ENST00000497203 LDAHQ9H6V9 325 aa5.03□□□□□ -1.6
SMC4-225ENST00000497203 PARPBPQ9NWS1 579 aa5.03□□□□□ -1.6
SMC4-225ENST00000497203 AJAP1Q9UKB5 411 aaPredicted RBP5.03□□□□□ -1.6
SMC4-225ENST00000497203 HDAC5Q9UQL6 1122 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms