RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 FAM213AQ9BRX8 229 aa12.94□□□□□ -0.34
APTX-233ENST00000496030 MRPL9Q9BYD2 267 aaKnown RBP12.94□□□□□ -0.34
APTX-233ENST00000496030 GZF1Q9H116 711 aaPredicted RBP12.94□□□□□ -0.34
APTX-233ENST00000496030 PLEKHA5Q9HAU0 1116 aa12.94□□□□□ -0.34
APTX-233ENST00000496030 TMEM63CQ9P1W3 806 aa12.94□□□□□ -0.34
APTX-233ENST00000496030 KIAA0391O15091 583 aaKnown RBP12.93□□□□□ -0.34
APTX-233ENST00000496030 LINC01565O15544 149 aa12.93□□□□□ -0.34
APTX-233ENST00000496030 GALTP07902 379 aa12.93□□□□□ -0.34
APTX-233ENST00000496030 IGFBP6P24592 240 aaPredicted RBP12.93□□□□□ -0.34
APTX-233ENST00000496030 PBX3P40426 434 aa12.93□□□□□ -0.34
APTX-233ENST00000496030 SLC11A1P49279 550 aa12.93□□□□□ -0.34
APTX-233ENST00000496030 YARSP54577 528 aaKnown RBP12.93□□□□□ -0.34
APTX-233ENST00000496030 BCAR1P56945 870 aa12.93□□□□□ -0.34
APTX-233ENST00000496030 SOX4Q06945 474 aaPredicted RBP12.93□□□□□ -0.34
APTX-233ENST00000496030 SPAG1Q07617 926 aa12.93□□□□□ -0.34
APTX-233ENST00000496030 HYAL1Q12794 435 aa12.93□□□□□ -0.34
APTX-233ENST00000496030 GRIK3Q13003 919 aa12.93□□□□□ -0.34
APTX-233ENST00000496030 NFIL3Q16649 462 aa12.93□□□□□ -0.34
APTX-233ENST00000496030 GLRA4Q5JXX5 417 aa12.93□□□□□ -0.34
APTX-233ENST00000496030 KCNT2Q6UVM3 1135 aa12.93□□□□□ -0.34
APTX-233ENST00000496030 HS2ST1Q7LGA3 356 aa12.93□□□□□ -0.34
APTX-233ENST00000496030 TMEM173Q86WV6 379 aaPredicted RBP12.93□□□□□ -0.34
APTX-233ENST00000496030 SUGP1Q8IWZ8 645 aaKnown RBP12.93□□□□□ -0.34
APTX-233ENST00000496030 GPD1LQ8N335 351 aa12.93□□□□□ -0.34
APTX-233ENST00000496030 TRIML1Q8N9V2 468 aa12.93□□□□□ -0.34
APTX-233ENST00000496030 GOLGA5Q8TBA6 731 aa12.93□□□□□ -0.34
APTX-233ENST00000496030 BCL7CQ8WUZ0 217 aaPredicted RBP12.93□□□□□ -0.34
APTX-233ENST00000496030 SAMD11Q96NU1 681 aa12.93□□□□□ -0.34
APTX-233ENST00000496030 MED15Q96RN5 788 aa12.93□□□□□ -0.34
APTX-233ENST00000496030 PRRX2Q99811 253 aa12.93□□□□□ -0.34
APTX-233ENST00000496030 PAAF1Q9BRP4 392 aa12.93□□□□□ -0.34
APTX-233ENST00000496030 GTPBP4Q9BZE4 634 aaKnown RBP12.93□□□□□ -0.34
APTX-233ENST00000496030 RPF1Q9H9Y2 349 aaKnown RBP12.93□□□□□ -0.34
APTX-233ENST00000496030 TOPORSQ9NS56 1045 aaPredicted RBP12.93□□□□□ -0.34
APTX-233ENST00000496030 CACNG4Q9UBN1 327 aa12.93□□□□□ -0.34
APTX-233ENST00000496030 GVINP1Q7Z2Y8 2422 aa12.92□□□□□ -0.34
APTX-233ENST00000496030 F8W810 466 aa12.92□□□□□ -0.34
APTX-233ENST00000496030 KIF20AO95235 890 aa12.92□□□□□ -0.34
APTX-233ENST00000496030 EFEMP2O95967 443 aa12.92□□□□□ -0.34
APTX-233ENST00000496030 LDHAP00338 332 aaKnown RBP12.92□□□□□ -0.34
APTX-233ENST00000496030 NR3C1P04150 777 aa12.92□□□□□ -0.34
APTX-233ENST00000496030 RB1P06400 928 aa12.92□□□□□ -0.34
APTX-233ENST00000496030 THP07101 528 aa12.92□□□□□ -0.34
APTX-233ENST00000496030 LAG3P18627 525 aa12.92□□□□□ -0.34
APTX-233ENST00000496030 CASP4P49662 377 aa12.92□□□□□ -0.34
APTX-233ENST00000496030 CYP2J2P51589 502 aa12.92□□□□□ -0.34
APTX-233ENST00000496030 MCCD1P59942 119 aaPredicted RBP12.92□□□□□ -0.34
APTX-233ENST00000496030 ZXDAP98168 799 aa12.92□□□□□ -0.34
APTX-233ENST00000496030 RNASELQ05823 741 aaKnown RBP12.92□□□□□ -0.34
APTX-233ENST00000496030 TUSC3Q13454 348 aa12.92□□□□□ -0.34
APTX-233ENST00000496030 CAMK1Q14012 370 aa12.92□□□□□ -0.34
APTX-233ENST00000496030 MYBPC2Q14324 1141 aa12.92□□□□□ -0.34
APTX-233ENST00000496030 ANKRD40Q6AI12 368 aa12.92□□□□□ -0.34
APTX-233ENST00000496030 CD300LGQ6UXG3 332 aa12.92□□□□□ -0.34
APTX-233ENST00000496030 ASCL5Q7RTU5 278 aa12.92□□□□□ -0.34
APTX-233ENST00000496030 BRSK2Q8IWQ3 736 aa12.92□□□□□ -0.34
APTX-233ENST00000496030 ZC3H3Q8IXZ2 948 aaKnown RBP12.92□□□□□ -0.34
APTX-233ENST00000496030 SLC39A11Q8N1S5 342 aa12.92□□□□□ -0.34
APTX-233ENST00000496030 KLHL23Q8NBE8 558 aa12.92□□□□□ -0.34
APTX-233ENST00000496030 XXYLT1Q8NBI6 393 aa12.92□□□□□ -0.34
APTX-233ENST00000496030 PLEKHO2Q8TD55 490 aa12.92□□□□□ -0.34
APTX-233ENST00000496030 C18orf25Q96B23 403 aaPredicted RBP12.92□□□□□ -0.34
APTX-233ENST00000496030 TMEM175Q9BSA9 504 aa12.92□□□□□ -0.34
APTX-233ENST00000496030 PLVAPQ9BX97 442 aa12.92□□□□□ -0.34
APTX-233ENST00000496030 ASB7Q9H672 318 aa12.92□□□□□ -0.34
APTX-233ENST00000496030 DMXL1Q9Y485 3027 aa12.92□□□□□ -0.34
APTX-233ENST00000496030 NT5C1B-RDH14C9J2C7 533 aa12.91□□□□□ -0.34
APTX-233ENST00000496030 NRP1O14786 923 aa12.91□□□□□ -0.34
APTX-233ENST00000496030 GRM6O15303 877 aa12.91□□□□□ -0.34
APTX-233ENST00000496030 ZC3H11AO75152 810 aaKnown RBP eCLIP12.91□□□□□ -0.34
APTX-233ENST00000496030 ALDH2P05091 517 aa12.91□□□□□ -0.34
APTX-233ENST00000496030 ITGB1P05556 798 aa12.91□□□□□ -0.34
APTX-233ENST00000496030 DNAJB1P25685 340 aa12.91□□□□□ -0.34
APTX-233ENST00000496030 CTNNB1P35222 781 aa12.91□□□□□ -0.34
APTX-233ENST00000496030 SMAD4Q13485 552 aaKnown RBP12.91□□□□□ -0.34
APTX-233ENST00000496030 SNRNP35Q16560 246 aaKnown RBP12.91□□□□□ -0.34
APTX-233ENST00000496030 EDRF1Q3B7T1 1238 aa12.91□□□□□ -0.34
APTX-233ENST00000496030 SCARA3Q6AZY7 606 aa12.91□□□□□ -0.34
APTX-233ENST00000496030 JADE1Q6IE81 842 aa12.91□□□□□ -0.34
APTX-233ENST00000496030 CD302Q8IX05 232 aa12.91□□□□□ -0.34
APTX-233ENST00000496030 EFCAB13Q8IY85 973 aa12.91□□□□□ -0.34
APTX-233ENST00000496030 SPPL3Q8TCT6 385 aa12.91□□□□□ -0.34
APTX-233ENST00000496030 RABGGTAQ92696 567 aa12.91□□□□□ -0.34
APTX-233ENST00000496030 ATOH1Q92858 354 aaPredicted RBP12.91□□□□□ -0.34
APTX-233ENST00000496030 P2RX5Q93086 422 aa12.91□□□□□ -0.34
APTX-233ENST00000496030 DHTKD1Q96HY7 919 aaPredicted RBP12.91□□□□□ -0.34
APTX-233ENST00000496030 FAM84AQ96KN4 292 aa12.91□□□□□ -0.34
APTX-233ENST00000496030 ZNF558Q96NG5 402 aa12.91□□□□□ -0.34
APTX-233ENST00000496030 RPS6KC1Q96S38 1066 aa12.91□□□□□ -0.34
APTX-233ENST00000496030 TSPAN18Q96SJ8 248 aa12.91□□□□□ -0.34
APTX-233ENST00000496030 DUSP9Q99956 384 aaKnown RBP12.91□□□□□ -0.34
APTX-233ENST00000496030 VN1R3Q9BXE9 311 aa12.91□□□□□ -0.34
APTX-233ENST00000496030 GOLGA2P5Q9HBQ8 144 aa12.91□□□□□ -0.34
APTX-233ENST00000496030 KIAA1586Q9HCI6 787 aa12.91□□□□□ -0.34
APTX-233ENST00000496030 PDE11AQ9HCR9 933 aa12.91□□□□□ -0.34
APTX-233ENST00000496030 MARCH5Q9NX47 278 aa12.91□□□□□ -0.34
APTX-233ENST00000496030 RWDD3Q9Y3V2 267 aa12.91□□□□□ -0.34
APTX-233ENST00000496030 CACNA1BQ00975 2339 aa12.91□□□□□ -0.34
APTX-233ENST00000496030 PLXNA4Q9HCM2 1894 aa12.91□□□□□ -0.34
APTX-233ENST00000496030 TRIM49BA6NDI0 452 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms