RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 GCOM2Q9BZD3 368 aaPredicted RBP11.04□□□□□ -0.64
HDAC3-214ENST00000495485 TRPV6Q9H1D0 765 aa11.04□□□□□ -0.64
HDAC3-214ENST00000495485 MTIF3Q9H2K0 278 aaKnown RBP11.04□□□□□ -0.64
HDAC3-214ENST00000495485 RPF1Q9H9Y2 349 aaKnown RBP11.04□□□□□ -0.64
HDAC3-214ENST00000495485 PRDM5Q9NQX1 630 aaPredicted RBP11.04□□□□□ -0.64
HDAC3-214ENST00000495485 TRMT13Q9NUP7 481 aaKnown RBP11.04□□□□□ -0.64
HDAC3-214ENST00000495485 SETD4Q9NVD3 440 aa11.04□□□□□ -0.64
HDAC3-214ENST00000495485 REXO2Q9Y3B8 237 aaKnown RBP11.04□□□□□ -0.64
HDAC3-214ENST00000495485 JRKLQ9Y4A0 524 aa11.04□□□□□ -0.64
HDAC3-214ENST00000495485 MYO9BQ13459 2157 aa11.03□□□□□ -0.64
HDAC3-214ENST00000495485 CTIFO43310 598 aaKnown RBP11.03□□□□□ -0.64
HDAC3-214ENST00000495485 H2AFZP0C0S5 128 aa11.03□□□□□ -0.64
HDAC3-214ENST00000495485 CYP2C9P11712 490 aa11.03□□□□□ -0.64
HDAC3-214ENST00000495485 AXLP30530 894 aa11.03□□□□□ -0.64
HDAC3-214ENST00000495485 ACOT2P49753 483 aa11.03□□□□□ -0.64
HDAC3-214ENST00000495485 CHMP4BP1P59074 171 aa11.03□□□□□ -0.64
HDAC3-214ENST00000495485 FPGSQ05932 587 aa11.03□□□□□ -0.64
HDAC3-214ENST00000495485 GFPT1Q06210 699 aaPredicted RBP11.03□□□□□ -0.64
HDAC3-214ENST00000495485 CKAP4Q07065 602 aaKnown RBP11.03□□□□□ -0.64
HDAC3-214ENST00000495485 TRPC3Q13507 836 aa11.03□□□□□ -0.64
HDAC3-214ENST00000495485 ENOX2Q16206 610 aaKnown RBP11.03□□□□□ -0.64
HDAC3-214ENST00000495485 WHAMMP3Q1A5X7 153 aa11.03□□□□□ -0.64
HDAC3-214ENST00000495485 DUOXA2Q1HG44 320 aa11.03□□□□□ -0.64
HDAC3-214ENST00000495485 ZNF568Q3ZCX4 644 aa11.03□□□□□ -0.64
HDAC3-214ENST00000495485 ZACNQ401N2 412 aa11.03□□□□□ -0.64
HDAC3-214ENST00000495485 FAM26DQ5JW98 314 aa11.03□□□□□ -0.64
HDAC3-214ENST00000495485 C1orf220Q5T0J3 134 aa11.03□□□□□ -0.64
HDAC3-214ENST00000495485 H2AFVQ71UI9 128 aa11.03□□□□□ -0.64
HDAC3-214ENST00000495485 MTERF4Q7Z6M4 381 aaKnown RBP11.03□□□□□ -0.64
HDAC3-214ENST00000495485 ZNF677Q86XU0 584 aa11.03□□□□□ -0.64
HDAC3-214ENST00000495485 SYCE1Q8N0S2 351 aa11.03□□□□□ -0.64
HDAC3-214ENST00000495485 LINC01465Q8N7H1 131 aa11.03□□□□□ -0.64
HDAC3-214ENST00000495485 TRAPPC12Q8WVT3 735 aa11.03□□□□□ -0.64
HDAC3-214ENST00000495485 FAXDC2Q96IV6 333 aa11.03□□□□□ -0.64
HDAC3-214ENST00000495485 RPGRIP1Q96KN7 1286 aa11.03□□□□□ -0.64
HDAC3-214ENST00000495485 WDR24Q96S15 920 aa11.03□□□□□ -0.64
HDAC3-214ENST00000495485 RNF216Q9NWF9 866 aaPredicted RBP11.03□□□□□ -0.64
HDAC3-214ENST00000495485 CDC23Q9UJX2 597 aa11.03□□□□□ -0.64
HDAC3-214ENST00000495485 NAGPAQ9UK23 515 aa11.03□□□□□ -0.64
HDAC3-214ENST00000495485 A0A0A6YYK5 440 aaPredicted RBP11.02□□□□□ -0.65
HDAC3-214ENST00000495485 TRIM43BA6NCK2 446 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 EFCAB8A8MWE9 144 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 TREHO43280 583 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 CLSTN1O94985 981 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 CLTAP09496 248 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 TMEM191BP0C7N4 346 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 HARSP12081 509 aaKnown RBP11.02□□□□□ -0.65
HDAC3-214ENST00000495485 CKBP12277 381 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 PRLRP16471 622 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 USP8P40818 1118 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 PDE6CP51160 858 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 NLRP11P59045 1033 aaKnown RBP11.02□□□□□ -0.65
HDAC3-214ENST00000495485 MBTD1Q05BQ5 628 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 MKRN4PQ13434 485 aaPredicted RBP11.02□□□□□ -0.65
HDAC3-214ENST00000495485 DRP2Q13474 957 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 SGSM1Q2NKQ1 1148 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 TRIM71Q2Q1W2 868 aaKnown RBP11.02□□□□□ -0.65
HDAC3-214ENST00000495485 DCAF4L1Q3SXM0 396 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 MARCH8Q5T0T0 291 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 C15orf39Q6ZRI6 1047 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 LRRC8DQ7L1W4 858 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 ZNF571Q7Z3V5 609 aaPredicted RBP11.02□□□□□ -0.65
HDAC3-214ENST00000495485 ZBTB33Q86T24 672 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 NT5DC4Q86YG4 428 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 UBXN4Q92575 508 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 TAF4BQ92750 862 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 APBB2Q92870 758 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 TRIM43Q96BQ3 446 aaPredicted RBP11.02□□□□□ -0.65
HDAC3-214ENST00000495485 ZBTB45Q96K62 511 aaPredicted RBP11.02□□□□□ -0.65
HDAC3-214ENST00000495485 AGPAT1Q99943 283 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 ASB7Q9H672 318 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 PDE11AQ9HCR9 933 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 CPSF3Q9UKF6 684 aaKnown RBP11.02□□□□□ -0.65
HDAC3-214ENST00000495485 MRFAP1Q9Y605 127 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 SAR1BQ9Y6B6 198 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 CNTNAP2Q9UHC6 1331 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 LAMA3Q16787 3333 aa11.02□□□□□ -0.65
HDAC3-214ENST00000495485 MICAL3Q7RTP6 2002 aa11.01□□□□□ -0.65
HDAC3-214ENST00000495485 A0A087WZ62 844 aa11.01□□□□□ -0.65
HDAC3-214ENST00000495485 A0A087X0T9 212 aa11.01□□□□□ -0.65
HDAC3-214ENST00000495485 MACROD2A1Z1Q3 448 aa11.01□□□□□ -0.65
HDAC3-214ENST00000495485 H0YGN5 161 aa11.01□□□□□ -0.65
HDAC3-214ENST00000495485 FOXN3O00409 490 aaPredicted RBP11.01□□□□□ -0.65
HDAC3-214ENST00000495485 BAIAP3O94812 1187 aa11.01□□□□□ -0.65
HDAC3-214ENST00000495485 HLA-DRAP01903 254 aa11.01□□□□□ -0.65
HDAC3-214ENST00000495485 CXCL10P02778 98 aa11.01□□□□□ -0.65
HDAC3-214ENST00000495485 C4BPAP04003 597 aaKnown RBP11.01□□□□□ -0.65
HDAC3-214ENST00000495485 IQCF3P0C7M6 154 aa11.01□□□□□ -0.65
HDAC3-214ENST00000495485 FAM228BP0C875 321 aa11.01□□□□□ -0.65
HDAC3-214ENST00000495485 GZMAP12544 262 aa11.01□□□□□ -0.65
HDAC3-214ENST00000495485 TCP1P17987 556 aaKnown RBP11.01□□□□□ -0.65
HDAC3-214ENST00000495485 PROZP22891 400 aa11.01□□□□□ -0.65
HDAC3-214ENST00000495485 THPOP40225 353 aa11.01□□□□□ -0.65
HDAC3-214ENST00000495485 APBA1Q02410 837 aa11.01□□□□□ -0.65
HDAC3-214ENST00000495485 CCDC70Q6NSX1 233 aa11.01□□□□□ -0.65
HDAC3-214ENST00000495485 GJB7Q6PEY0 223 aa11.01□□□□□ -0.65
HDAC3-214ENST00000495485 CRELD2Q6UXH1 353 aaPredicted RBP11.01□□□□□ -0.65
HDAC3-214ENST00000495485 FAM71AQ8IYT1 594 aa11.01□□□□□ -0.65
HDAC3-214ENST00000495485 PLEKHO2Q8TD55 490 aa11.01□□□□□ -0.65
HDAC3-214ENST00000495485 CTNNBL1Q8WYA6 563 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms