RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 TMEM189-UBE2V1I3L0A0 370 aa13.09□□□□□ -0.31
CSNK1E-213ENST00000495232 CXCL14O95715 111 aa13.09□□□□□ -0.31
CSNK1E-213ENST00000495232 SOD2P04179 222 aa13.09□□□□□ -0.31
CSNK1E-213ENST00000495232 URODP06132 367 aa13.09□□□□□ -0.31
CSNK1E-213ENST00000495232 NFICP08651 508 aa13.09□□□□□ -0.31
CSNK1E-213ENST00000495232 TMEM191BP0C7N4 346 aa13.09□□□□□ -0.31
CSNK1E-213ENST00000495232 CTSAP10619 480 aa13.09□□□□□ -0.31
CSNK1E-213ENST00000495232 NR2F2P24468 414 aa13.09□□□□□ -0.31
CSNK1E-213ENST00000495232 IRS1P35568 1242 aa13.09□□□□□ -0.31
CSNK1E-213ENST00000495232 ERVFC1P60507 584 aa13.09□□□□□ -0.31
CSNK1E-213ENST00000495232 SOX4Q06945 474 aaPredicted RBP13.09□□□□□ -0.31
CSNK1E-213ENST00000495232 CAMK1Q14012 370 aa13.09□□□□□ -0.31
CSNK1E-213ENST00000495232 ZBTB6Q15916 424 aa13.09□□□□□ -0.31
CSNK1E-213ENST00000495232 USP41Q3LFD5 358 aa13.09□□□□□ -0.31
CSNK1E-213ENST00000495232 SPATA1Q5VX52 437 aa13.09□□□□□ -0.31
CSNK1E-213ENST00000495232 CEP135Q66GS9 1140 aa13.09□□□□□ -0.31
CSNK1E-213ENST00000495232 FUT10Q6P4F1 479 aa13.09□□□□□ -0.31
CSNK1E-213ENST00000495232 USP37Q86T82 979 aa13.09□□□□□ -0.31
CSNK1E-213ENST00000495232 GPT2Q8TD30 523 aa13.09□□□□□ -0.31
CSNK1E-213ENST00000495232 BCL7CQ8WUZ0 217 aaPredicted RBP13.09□□□□□ -0.31
CSNK1E-213ENST00000495232 ANKRD36BP1Q96IX9 119 aa13.09□□□□□ -0.31
CSNK1E-213ENST00000495232 FBXL18Q96ME1 805 aa13.09□□□□□ -0.31
CSNK1E-213ENST00000495232 PDE11AQ9HCR9 933 aa13.09□□□□□ -0.31
CSNK1E-213ENST00000495232 MRPL17Q9NRX2 175 aaKnown RBP13.09□□□□□ -0.31
CSNK1E-213ENST00000495232 DPP3Q9NY33 737 aa13.09□□□□□ -0.31
CSNK1E-213ENST00000495232 COL6A3P12111 3177 aa13.09□□□□□ -0.31
CSNK1E-213ENST00000495232 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 FSD2A1L4K1 749 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 F8W810 466 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 C2CD2LO14523 706 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 TNNC2P02585 160 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 DLATP10515 647 aaKnown RBP13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 TNNI1P19237 187 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 PTMSP20962 102 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 LRPAP1P30533 357 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 MCM4P33991 863 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 GLUD2P49448 558 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 CYP24A1Q07973 514 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 ADAM9Q13443 819 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 MORC3Q14149 939 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 NFIL3Q16649 462 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 DUOXA2Q1HG44 320 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 EDRF1Q3B7T1 1238 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 TCEAL5Q5H9L2 206 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 FAM171A1Q5VUB5 890 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 KLHL10Q6JEL2 608 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 RBM23Q86U06 439 aaKnown RBP13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 CEP57Q86XR8 500 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 ADSSL1Q8N142 457 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 TMEM174Q8WUU8 243 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 CCDC127Q96BQ5 260 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 DHTKD1Q96HY7 919 aaPredicted RBP13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 HERC2P3Q9BVR0 1158 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 EMILIN2Q9BXX0 1053 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 GPR62Q9BZJ7 368 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 ZBP1Q9H171 429 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 TLE6Q9H808 572 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 REV3LO60673 3130 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 ANK1P16157 1881 aa13.08□□□□□ -0.32
CSNK1E-213ENST00000495232 PRRC2BQ5JSZ5 2229 aaKnown RBP13.07□□□□□ -0.32
CSNK1E-213ENST00000495232 BICDL2A1A5D9 508 aa13.07□□□□□ -0.32
CSNK1E-213ENST00000495232 FSCN2O14926 492 aa13.07□□□□□ -0.32
CSNK1E-213ENST00000495232 CETN3O15182 167 aa13.07□□□□□ -0.32
CSNK1E-213ENST00000495232 NCK2O43639 380 aa13.07□□□□□ -0.32
CSNK1E-213ENST00000495232 KRT13P13646 458 aa13.07□□□□□ -0.32
CSNK1E-213ENST00000495232 CREMQ03060 361 aa13.07□□□□□ -0.32
CSNK1E-213ENST00000495232 LRRC63Q05C16 580 aa13.07□□□□□ -0.32
CSNK1E-213ENST00000495232 PSMD6Q15008 389 aa13.07□□□□□ -0.32
CSNK1E-213ENST00000495232 CENPPQ6IPU0 288 aa13.07□□□□□ -0.32
CSNK1E-213ENST00000495232 PDXDC1Q6P996 788 aa13.07□□□□□ -0.32
CSNK1E-213ENST00000495232 EP400NLQ6ZTU2 488 aa13.07□□□□□ -0.32
CSNK1E-213ENST00000495232 WDR49Q8IV35 697 aa13.07□□□□□ -0.32
CSNK1E-213ENST00000495232 EFCAB13Q8IY85 973 aa13.07□□□□□ -0.32
CSNK1E-213ENST00000495232 MRPL43Q8N983 215 aaKnown RBP13.07□□□□□ -0.32
CSNK1E-213ENST00000495232 CDCA3Q99618 268 aaPredicted RBP13.07□□□□□ -0.32
CSNK1E-213ENST00000495232 IGFLR1Q9H665 355 aa13.07□□□□□ -0.32
CSNK1E-213ENST00000495232 DMAC2Q9NW81 257 aa13.07□□□□□ -0.32
CSNK1E-213ENST00000495232 ARHGEF37A1IGU5 675 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 C2orf71A6NGG8 1288 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 HIDE1A8MVS5 230 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 ITGB3P05106 788 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 KRT19P08727 400 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 SRGAP2BP0DMP2 458 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 EPB41P11171 864 aaKnown RBP13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 PAX3P23760 479 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 CCNE1P24864 410 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 PSMC2P35998 433 aaKnown RBP13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 NRIP1P48552 1158 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 GUCY2FP51841 1108 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 FKBP3Q00688 224 aaKnown RBP13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 DSG1Q02413 1049 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 C9orf57Q5W0N0 161 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 ANKRD40Q6AI12 368 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 DSTYKQ6XUX3 929 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 TAS1R1Q7RTX1 841 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 FAM186BQ8IYM0 893 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 CSGALNACT2Q8N6G5 542 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 NELFBQ8WX92 580 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 AUTS2Q8WXX7 1259 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms