RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 BMP1P13497 986 aa17.31■□□□□ 0.36
LIME1-209ENST00000494776 CREMQ03060 361 aa17.31■□□□□ 0.36
LIME1-209ENST00000494776 EHHADHQ08426 723 aa17.31■□□□□ 0.36
LIME1-209ENST00000494776 PSMD2Q13200 908 aa17.31■□□□□ 0.36
LIME1-209ENST00000494776 TMEM132DQ14C87 1099 aa17.31■□□□□ 0.36
LIME1-209ENST00000494776 JADE1Q6IE81 842 aa17.31■□□□□ 0.36
LIME1-209ENST00000494776 EPM2AIP1Q7L775 607 aaPredicted RBP17.31■□□□□ 0.36
LIME1-209ENST00000494776 BEST2Q8NFU1 509 aa17.31■□□□□ 0.36
LIME1-209ENST00000494776 VN1R2Q8NFZ6 395 aa17.31■□□□□ 0.36
LIME1-209ENST00000494776 CBWD1Q9BRT8 395 aa17.31■□□□□ 0.36
LIME1-209ENST00000494776 ASB7Q9H672 318 aa17.31■□□□□ 0.36
LIME1-209ENST00000494776 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.31■□□□□ 0.36
LIME1-209ENST00000494776 CLEC1BQ9P126 229 aa17.31■□□□□ 0.36
LIME1-209ENST00000494776 CITO14578 2027 aa17.31■□□□□ 0.36
LIME1-209ENST00000494776 GOLGA8IPA6NC78 632 aa17.3■□□□□ 0.36
LIME1-209ENST00000494776 GOLGA8JA6NMD2 632 aa17.3■□□□□ 0.36
LIME1-209ENST00000494776 KIAA0391O15091 583 aaKnown RBP17.3■□□□□ 0.36
LIME1-209ENST00000494776 KLRC4O43908 158 aa17.3■□□□□ 0.36
LIME1-209ENST00000494776 EXTL3O43909 919 aa17.3■□□□□ 0.36
LIME1-209ENST00000494776 LILRB3O75022 631 aa17.3■□□□□ 0.36
LIME1-209ENST00000494776 IL18RAPO95256 599 aa17.3■□□□□ 0.36
LIME1-209ENST00000494776 PRR29P0C7W0 189 aa17.3■□□□□ 0.36
LIME1-209ENST00000494776 CYP3A5P20815 502 aa17.3■□□□□ 0.36
LIME1-209ENST00000494776 POU5F1Q01860 360 aaKnown RBP17.3■□□□□ 0.36
LIME1-209ENST00000494776 ANKRD54Q6NXT1 300 aa17.3■□□□□ 0.36
LIME1-209ENST00000494776 PDXDC1Q6P996 788 aa17.3■□□□□ 0.36
LIME1-209ENST00000494776 TMEM184AQ6ZMB5 413 aa17.3■□□□□ 0.36
LIME1-209ENST00000494776 HS2ST1Q7LGA3 356 aa17.3■□□□□ 0.36
LIME1-209ENST00000494776 GLYCTKQ8IVS8 523 aa17.3■□□□□ 0.36
LIME1-209ENST00000494776 GPD1LQ8N335 351 aa17.3■□□□□ 0.36
LIME1-209ENST00000494776 C3orf58Q8NDZ4 430 aa17.3■□□□□ 0.36
LIME1-209ENST00000494776 ADAMTS19Q8TE59 1207 aa17.3■□□□□ 0.36
LIME1-209ENST00000494776 SCFD1Q8WVM8 642 aa17.3■□□□□ 0.36
LIME1-209ENST00000494776 GRXCR2A6NFK2 248 aa17.29■□□□□ 0.36
LIME1-209ENST00000494776 I3L4J1 428 aa17.29■□□□□ 0.36
LIME1-209ENST00000494776 TEX28O15482 410 aa17.29■□□□□ 0.36
LIME1-209ENST00000494776 ADRB2P07550 413 aa17.29■□□□□ 0.36
LIME1-209ENST00000494776 NFICP08651 508 aa17.29■□□□□ 0.36
LIME1-209ENST00000494776 EPCAMP16422 314 aa17.29■□□□□ 0.36
LIME1-209ENST00000494776 IGFBP6P24592 240 aaPredicted RBP17.29■□□□□ 0.36
LIME1-209ENST00000494776 MCM4P33991 863 aa17.29■□□□□ 0.36
LIME1-209ENST00000494776 BRCC3P46736 316 aa17.29■□□□□ 0.36
LIME1-209ENST00000494776 FAM160A1Q05DH4 1040 aa17.29■□□□□ 0.36
LIME1-209ENST00000494776 SMAD4Q13485 552 aaKnown RBP17.29■□□□□ 0.36
LIME1-209ENST00000494776 KCNC3Q14003 757 aa17.29■□□□□ 0.36
LIME1-209ENST00000494776 ZBTB6Q15916 424 aa17.29■□□□□ 0.36
LIME1-209ENST00000494776 KNOP1Q1ED39 458 aaKnown RBP17.29■□□□□ 0.36
LIME1-209ENST00000494776 RTP2Q5QGT7 225 aa17.29■□□□□ 0.36
LIME1-209ENST00000494776 PRSS55Q6UWB4 352 aaPredicted RBP17.29■□□□□ 0.36
LIME1-209ENST00000494776 CRELD2Q6UXH1 353 aaPredicted RBP17.29■□□□□ 0.36
LIME1-209ENST00000494776 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.29■□□□□ 0.36
LIME1-209ENST00000494776 GPR65Q8IYL9 337 aa17.29■□□□□ 0.36
LIME1-209ENST00000494776 FMR1NBQ8N0W7 255 aaPredicted RBP17.29■□□□□ 0.36
LIME1-209ENST00000494776 MSLNLQ96KJ4 702 aa17.29■□□□□ 0.36
LIME1-209ENST00000494776 APOL5Q9BWW9 433 aa17.29■□□□□ 0.36
LIME1-209ENST00000494776 RXFP1Q9HBX9 757 aa17.29■□□□□ 0.36
LIME1-209ENST00000494776 RBAKQ9NYW8 714 aaPredicted RBP17.29■□□□□ 0.36
LIME1-209ENST00000494776 DERAQ9Y315 318 aa17.29■□□□□ 0.36
LIME1-209ENST00000494776 TRIP11Q15643 1979 aa17.29■□□□□ 0.36
LIME1-209ENST00000494776 VCANP13611 3396 aa17.28■□□□□ 0.36
LIME1-209ENST00000494776 TNFRSF10AO00220 468 aa17.28■□□□□ 0.36
LIME1-209ENST00000494776 CLIC2O15247 247 aa17.28■□□□□ 0.36
LIME1-209ENST00000494776 MBTPS2O43462 519 aa17.28■□□□□ 0.36
LIME1-209ENST00000494776 IL9P15248 144 aa17.28■□□□□ 0.36
LIME1-209ENST00000494776 HOXB8P17481 243 aaPredicted RBP17.28■□□□□ 0.36
LIME1-209ENST00000494776 RPL17P18621 184 aaKnown RBP17.28■□□□□ 0.36
LIME1-209ENST00000494776 LRPAP1P30533 357 aa17.28■□□□□ 0.36
LIME1-209ENST00000494776 HOXD13P35453 343 aa17.28■□□□□ 0.36
LIME1-209ENST00000494776 CLCN4P51793 760 aa17.28■□□□□ 0.36
LIME1-209ENST00000494776 GUCY2FP51841 1108 aa17.28■□□□□ 0.36
LIME1-209ENST00000494776 SNRPFP62306 86 aaKnown RBP17.28■□□□□ 0.36
LIME1-209ENST00000494776 DPYDQ12882 1025 aa17.28■□□□□ 0.36
LIME1-209ENST00000494776 STK4Q13043 487 aa17.28■□□□□ 0.36
LIME1-209ENST00000494776 PSMD5Q16401 504 aa17.28■□□□□ 0.36
LIME1-209ENST00000494776 SPATA1Q5VX52 437 aa17.28■□□□□ 0.36
LIME1-209ENST00000494776 ELMSAN1Q6PJG2 1045 aa17.28■□□□□ 0.36
LIME1-209ENST00000494776 ZSWIM2Q8NEG5 633 aa17.28■□□□□ 0.36
LIME1-209ENST00000494776 SLC22A17Q8WUG5 538 aa17.28■□□□□ 0.36
LIME1-209ENST00000494776 UHRF1Q96T88 793 aaPredicted RBP17.28■□□□□ 0.36
LIME1-209ENST00000494776 DZANK1Q9NVP4 752 aa17.28■□□□□ 0.36
LIME1-209ENST00000494776 HSPBP1Q9NZL4 362 aa17.28■□□□□ 0.36
LIME1-209ENST00000494776 FNIP2Q9P278 1114 aa17.28■□□□□ 0.36
LIME1-209ENST00000494776 HOOK1Q9UJC3 728 aaKnown RBP17.28■□□□□ 0.36
LIME1-209ENST00000494776 C2CD2Q9Y426 696 aa17.28■□□□□ 0.36
LIME1-209ENST00000494776 XIRP2A4UGR9 3374 aa17.28■□□□□ 0.36
LIME1-209ENST00000494776 ZNF233A6NK53 670 aa17.27■□□□□ 0.36
LIME1-209ENST00000494776 TGFB1I1O43294 461 aa17.27■□□□□ 0.36
LIME1-209ENST00000494776 KIF20AO95235 890 aa17.27■□□□□ 0.36
LIME1-209ENST00000494776 GLUD1P00367 558 aa17.27■□□□□ 0.36
LIME1-209ENST00000494776 FGFR3P22607 806 aa17.27■□□□□ 0.36
LIME1-209ENST00000494776 TKTP29401 623 aaKnown RBP17.27■□□□□ 0.36
LIME1-209ENST00000494776 CYP2J2P51589 502 aa17.27■□□□□ 0.36
LIME1-209ENST00000494776 BMT2Q1RMZ1 405 aa17.27■□□□□ 0.36
LIME1-209ENST00000494776 CD300LGQ6UXG3 332 aa17.27■□□□□ 0.36
LIME1-209ENST00000494776 PALB2Q86YC2 1186 aa17.27■□□□□ 0.36
LIME1-209ENST00000494776 BRSK2Q8IWQ3 736 aa17.27■□□□□ 0.36
LIME1-209ENST00000494776 SMRP1Q8NCR6 262 aa17.27■□□□□ 0.36
LIME1-209ENST00000494776 KIAA0895Q8NCT3 520 aa17.27■□□□□ 0.36
LIME1-209ENST00000494776 CACTINQ8WUQ7 758 aaKnown RBP17.27■□□□□ 0.36
LIME1-209ENST00000494776 PIK3R5Q8WYR1 880 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms