RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 NOC3LQ8WTT2 800 aaKnown RBP12.68□□□□□ -0.38
UBA3-211ENST00000493957 HERC2P3Q9BVR0 1158 aa12.68□□□□□ -0.38
UBA3-211ENST00000493957 COLEC11Q9BWP8 271 aa12.68□□□□□ -0.38
UBA3-211ENST00000493957 RPF1Q9H9Y2 349 aaKnown RBP12.68□□□□□ -0.38
UBA3-211ENST00000493957 AGPAT3Q9NRZ7 376 aa12.68□□□□□ -0.38
UBA3-211ENST00000493957 ADAM28Q9UKQ2 775 aa12.68□□□□□ -0.38
UBA3-211ENST00000493957 C5orf42Q9H799 3197 aa12.67□□□□□ -0.38
UBA3-211ENST00000493957 UBE4BO95155 1302 aa12.67□□□□□ -0.38
UBA3-211ENST00000493957 SPTBN5Q9NRC6 3674 aaKnown RBP12.67□□□□□ -0.38
UBA3-211ENST00000493957 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.67□□□□□ -0.38
UBA3-211ENST00000493957 I3L4J1 428 aa12.67□□□□□ -0.38
UBA3-211ENST00000493957 C2CD2LO14523 706 aa12.67□□□□□ -0.38
UBA3-211ENST00000493957 TBX10O75333 385 aa12.67□□□□□ -0.38
UBA3-211ENST00000493957 PRPF40AO75400 957 aaKnown RBP12.67□□□□□ -0.38
UBA3-211ENST00000493957 RHOBTB3O94955 611 aa12.67□□□□□ -0.38
UBA3-211ENST00000493957 CXCL14O95715 111 aa12.67□□□□□ -0.38
UBA3-211ENST00000493957 MYL1P05976 194 aa12.67□□□□□ -0.38
UBA3-211ENST00000493957 ADRB2P07550 413 aa12.67□□□□□ -0.38
UBA3-211ENST00000493957 CTSAP10619 480 aa12.67□□□□□ -0.38
UBA3-211ENST00000493957 GARTP22102 1010 aa12.67□□□□□ -0.38
UBA3-211ENST00000493957 LTBRP36941 435 aa12.67□□□□□ -0.38
UBA3-211ENST00000493957 BRCC3P46736 316 aa12.67□□□□□ -0.38
UBA3-211ENST00000493957 PPP2R3AQ06190 1150 aa12.67□□□□□ -0.38
UBA3-211ENST00000493957 SMC1AQ14683 1233 aaKnown RBP12.67□□□□□ -0.38
UBA3-211ENST00000493957 COL19A1Q14993 1142 aa12.67□□□□□ -0.38
UBA3-211ENST00000493957 PTPN14Q15678 1187 aa12.67□□□□□ -0.38
UBA3-211ENST00000493957 ZBTB6Q15916 424 aa12.67□□□□□ -0.38
UBA3-211ENST00000493957 DUSP6Q16828 381 aa12.67□□□□□ -0.38
UBA3-211ENST00000493957 UPP1Q16831 310 aa12.67□□□□□ -0.38
UBA3-211ENST00000493957 EP400NLQ6ZTU2 488 aa12.67□□□□□ -0.38
UBA3-211ENST00000493957 STXBP4Q6ZWJ1 553 aa12.67□□□□□ -0.38
UBA3-211ENST00000493957 EFCAB13Q8IY85 973 aa12.67□□□□□ -0.38
UBA3-211ENST00000493957 SMYD4Q8IYR2 804 aaPredicted RBP12.67□□□□□ -0.38
UBA3-211ENST00000493957 MRPL43Q8N983 215 aaKnown RBP12.67□□□□□ -0.38
UBA3-211ENST00000493957 TLE6Q9H808 572 aa12.67□□□□□ -0.38
UBA3-211ENST00000493957 TMEM206Q9H813 350 aa12.67□□□□□ -0.38
UBA3-211ENST00000493957 PLEKHA5Q9HAU0 1116 aa12.67□□□□□ -0.38
UBA3-211ENST00000493957 CLDND1Q9NY35 253 aa12.67□□□□□ -0.38
UBA3-211ENST00000493957 MAPK8IP1Q9UQF2 711 aa12.67□□□□□ -0.38
UBA3-211ENST00000493957 XIRP2A4UGR9 3374 aa12.67□□□□□ -0.38
UBA3-211ENST00000493957 TULP1O00294 542 aaPredicted RBP12.66□□□□□ -0.38
UBA3-211ENST00000493957 PODXLO00592 558 aa12.66□□□□□ -0.38
UBA3-211ENST00000493957 LILRB3O75022 631 aa12.66□□□□□ -0.38
UBA3-211ENST00000493957 TADA2AO75478 443 aa12.66□□□□□ -0.38
UBA3-211ENST00000493957 SOD2P04179 222 aa12.66□□□□□ -0.38
UBA3-211ENST00000493957 CYP2J2P51589 502 aa12.66□□□□□ -0.38
UBA3-211ENST00000493957 KCNQ1P51787 676 aa12.66□□□□□ -0.38
UBA3-211ENST00000493957 KYAT1Q16773 422 aa12.66□□□□□ -0.38
UBA3-211ENST00000493957 CTC1Q2NKJ3 1217 aa12.66□□□□□ -0.38
UBA3-211ENST00000493957 RTP2Q5QGT7 225 aa12.66□□□□□ -0.38
UBA3-211ENST00000493957 LLGL2Q6P1M3 1020 aa12.66□□□□□ -0.38
UBA3-211ENST00000493957 CBWD2Q8IUF1 395 aa12.66□□□□□ -0.38
UBA3-211ENST00000493957 BRSK2Q8IWQ3 736 aa12.66□□□□□ -0.38
UBA3-211ENST00000493957 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.66□□□□□ -0.38
UBA3-211ENST00000493957 FEZF2Q8TBJ5 459 aa12.66□□□□□ -0.38
UBA3-211ENST00000493957 KCTD10Q9H3F6 313 aa12.66□□□□□ -0.38
UBA3-211ENST00000493957 UBE2ZQ9H832 354 aaPredicted RBP12.66□□□□□ -0.38
UBA3-211ENST00000493957 NGRNQ9NPE2 291 aaKnown RBP12.66□□□□□ -0.38
UBA3-211ENST00000493957 HSPBP1Q9NZL4 362 aa12.66□□□□□ -0.38
UBA3-211ENST00000493957 THEGQ9P2T0 379 aa12.66□□□□□ -0.38
UBA3-211ENST00000493957 BARX2Q9UMQ3 279 aaPredicted RBP12.66□□□□□ -0.38
UBA3-211ENST00000493957 DENND4AQ7Z401 1863 aa12.65□□□□□ -0.38
UBA3-211ENST00000493957 PTPRJQ12913 1337 aa12.65□□□□□ -0.38
UBA3-211ENST00000493957 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.65□□□□□ -0.38
UBA3-211ENST00000493957 H3BQ06 376 aaPredicted RBP12.65□□□□□ -0.38
UBA3-211ENST00000493957 EXTL3O43909 919 aa12.65□□□□□ -0.38
UBA3-211ENST00000493957 CLASP2O75122 1294 aaKnown RBP12.65□□□□□ -0.38
UBA3-211ENST00000493957 B3GAT3O94766 335 aa12.65□□□□□ -0.38
UBA3-211ENST00000493957 CNPP09543 421 aaKnown RBP12.65□□□□□ -0.38
UBA3-211ENST00000493957 NUDT7P0C024 238 aa12.65□□□□□ -0.38
UBA3-211ENST00000493957 RPL17P18621 184 aaKnown RBP12.65□□□□□ -0.38
UBA3-211ENST00000493957 KCNA5P22460 613 aa12.65□□□□□ -0.38
UBA3-211ENST00000493957 GLUD2P49448 558 aa12.65□□□□□ -0.38
UBA3-211ENST00000493957 PSMD2Q13200 908 aa12.65□□□□□ -0.38
UBA3-211ENST00000493957 ADAM15Q13444 863 aa12.65□□□□□ -0.38
UBA3-211ENST00000493957 KCNC3Q14003 757 aa12.65□□□□□ -0.38
UBA3-211ENST00000493957 KCNB1Q14721 858 aa12.65□□□□□ -0.38
UBA3-211ENST00000493957 TMEM132DQ14C87 1099 aa12.65□□□□□ -0.38
UBA3-211ENST00000493957 CLUL1Q15846 466 aa12.65□□□□□ -0.38
UBA3-211ENST00000493957 KNOP1Q1ED39 458 aaKnown RBP12.65□□□□□ -0.38
UBA3-211ENST00000493957 KIAA0319Q5VV43 1072 aa12.65□□□□□ -0.38
UBA3-211ENST00000493957 LMBRD2Q68DH5 695 aaPredicted RBP12.65□□□□□ -0.38
UBA3-211ENST00000493957 PDE12Q6L8Q7 609 aaKnown RBP12.65□□□□□ -0.38
UBA3-211ENST00000493957 DCLRE1AQ6PJP8 1040 aa12.65□□□□□ -0.38
UBA3-211ENST00000493957 PRSS55Q6UWB4 352 aaPredicted RBP12.65□□□□□ -0.38
UBA3-211ENST00000493957 GPD1LQ8N335 351 aa12.65□□□□□ -0.38
UBA3-211ENST00000493957 EFHBQ8N7U6 833 aa12.65□□□□□ -0.38
UBA3-211ENST00000493957 HLA-CQ95604 372 aa12.65□□□□□ -0.38
UBA3-211ENST00000493957 PABPC5Q96DU9 382 aaKnown RBP12.65□□□□□ -0.38
UBA3-211ENST00000493957 TIGD1Q96MW7 591 aa12.65□□□□□ -0.38
UBA3-211ENST00000493957 UROC1Q96N76 676 aa12.65□□□□□ -0.38
UBA3-211ENST00000493957 PDE11AQ9HCR9 933 aa12.65□□□□□ -0.38
UBA3-211ENST00000493957 CHST7Q9NS84 486 aa12.65□□□□□ -0.38
UBA3-211ENST00000493957 SLC38A7Q9NVC3 462 aa12.65□□□□□ -0.38
UBA3-211ENST00000493957 RBAKQ9NYW8 714 aaPredicted RBP12.65□□□□□ -0.38
UBA3-211ENST00000493957 CLEC1BQ9P126 229 aa12.65□□□□□ -0.38
UBA3-211ENST00000493957 PCDHA5Q9Y5H7 936 aa12.65□□□□□ -0.38
UBA3-211ENST00000493957 NCOR1O75376 2440 aa12.64□□□□□ -0.39
UBA3-211ENST00000493957 SF3B1O75533 1304 aaKnown RBP eCLIP12.64□□□□□ -0.39
UBA3-211ENST00000493957 CARNS1A5YM72 827 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms