RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 GTF2BQ00403 316 aa19.65■□□□□ 0.74
PTPRU-207ENST00000492954 RAB33AQ14088 237 aa19.65■□□□□ 0.74
PTPRU-207ENST00000492954 ENOX2Q16206 610 aaKnown RBP19.65■□□□□ 0.74
PTPRU-207ENST00000492954 ZC2HC1CQ53FD0 456 aaPredicted RBP19.65■□□□□ 0.74
PTPRU-207ENST00000492954 LIN9Q5TKA1 542 aa19.65■□□□□ 0.74
PTPRU-207ENST00000492954 FOXD4L5Q5VV16 416 aaPredicted RBP19.65■□□□□ 0.74
PTPRU-207ENST00000492954 ANKS3Q6ZW76 656 aa19.65■□□□□ 0.74
PTPRU-207ENST00000492954 MAP4K3Q8IVH8 894 aa19.65■□□□□ 0.74
PTPRU-207ENST00000492954 FOXD4L4Q8WXT5 416 aaPredicted RBP19.65■□□□□ 0.74
PTPRU-207ENST00000492954 DDX12PQ92771 950 aa19.65■□□□□ 0.74
PTPRU-207ENST00000492954 ARIH1Q9Y4X5 557 aaPredicted RBP19.65■□□□□ 0.74
PTPRU-207ENST00000492954 CDY1Q9Y6F8 540 aa19.65■□□□□ 0.74
PTPRU-207ENST00000492954 ZDBF2Q9HCK1 2354 aa19.65■□□□□ 0.74
PTPRU-207ENST00000492954 A0A087X0B3 334 aa19.64■□□□□ 0.73
PTPRU-207ENST00000492954 A0A0B4J269 797 aa19.64■□□□□ 0.73
PTPRU-207ENST00000492954 ANKRD63C9JTQ0 380 aa19.64■□□□□ 0.73
PTPRU-207ENST00000492954 OGTO15294 1046 aa19.64■□□□□ 0.73
PTPRU-207ENST00000492954 C8AP07357 584 aa19.64■□□□□ 0.73
PTPRU-207ENST00000492954 STK38Q15208 465 aa19.64■□□□□ 0.73
PTPRU-207ENST00000492954 SV2BQ7L1I2 683 aa19.64■□□□□ 0.73
PTPRU-207ENST00000492954 UBALD2Q8IYN6 164 aa19.64■□□□□ 0.73
PTPRU-207ENST00000492954 LINC00301Q8NCQ3 95 aa19.64■□□□□ 0.73
PTPRU-207ENST00000492954 STAMQ92783 540 aa19.64■□□□□ 0.73
PTPRU-207ENST00000492954 FAM122AQ96E09 287 aa19.64■□□□□ 0.73
PTPRU-207ENST00000492954 KIF12Q96FN5 646 aa19.64■□□□□ 0.73
PTPRU-207ENST00000492954 MYADMQ96S97 322 aa19.64■□□□□ 0.73
PTPRU-207ENST00000492954 MSTO1Q9BUK6 570 aa19.64■□□□□ 0.73
PTPRU-207ENST00000492954 PANK2Q9BZ23 570 aa19.64■□□□□ 0.73
PTPRU-207ENST00000492954 NUB1Q9Y5A7 615 aa19.64■□□□□ 0.73
PTPRU-207ENST00000492954 BACE2Q9Y5Z0 518 aa19.64■□□□□ 0.73
PTPRU-207ENST00000492954 CITO14578 2027 aa19.64■□□□□ 0.73
PTPRU-207ENST00000492954 ZNF318Q5VUA4 2279 aa19.63■□□□□ 0.73
PTPRU-207ENST00000492954 LACTBL1A8MY62 500 aa19.63■□□□□ 0.73
PTPRU-207ENST00000492954 TISP43B9A030 160 aa19.63■□□□□ 0.73
PTPRU-207ENST00000492954 GBP2P32456 591 aaPredicted RBP19.63■□□□□ 0.73
PTPRU-207ENST00000492954 ABCD1P33897 745 aa19.63■□□□□ 0.73
PTPRU-207ENST00000492954 STAT6P42226 847 aa19.63■□□□□ 0.73
PTPRU-207ENST00000492954 PPP2R3AQ06190 1150 aa19.63■□□□□ 0.73
PTPRU-207ENST00000492954 KYAT1Q16773 422 aa19.63■□□□□ 0.73
PTPRU-207ENST00000492954 PPM1LQ5SGD2 360 aa19.63■□□□□ 0.73
PTPRU-207ENST00000492954 VARS2Q5ST30 1063 aaKnown RBP19.63■□□□□ 0.73
PTPRU-207ENST00000492954 CCDC73Q6ZRK6 1079 aa19.63■□□□□ 0.73
PTPRU-207ENST00000492954 FBXL6Q8N531 539 aa19.63■□□□□ 0.73
PTPRU-207ENST00000492954 SLC7A14Q8TBB6 771 aa19.63■□□□□ 0.73
PTPRU-207ENST00000492954 DNAJC19Q96DA6 116 aa19.63■□□□□ 0.73
PTPRU-207ENST00000492954 IKZF4Q9H2S9 585 aa19.63■□□□□ 0.73
PTPRU-207ENST00000492954 ST6GALNAC4Q9H4F1 302 aa19.63■□□□□ 0.73
PTPRU-207ENST00000492954 TFIP11Q9UBB9 837 aaKnown RBP19.63■□□□□ 0.73
PTPRU-207ENST00000492954 SYN3O14994 580 aa19.62■□□□□ 0.73
PTPRU-207ENST00000492954 CCL16O15467 120 aa19.62■□□□□ 0.73
PTPRU-207ENST00000492954 PDGFBP01127 241 aaPredicted RBP19.62■□□□□ 0.73
PTPRU-207ENST00000492954 HSP90AA1P07900 732 aaKnown RBP19.62■□□□□ 0.73
PTPRU-207ENST00000492954 HNRNPA1P09651 372 aaKnown RBP eCLIP19.62■□□□□ 0.73
PTPRU-207ENST00000492954 MCM4P33991 863 aa19.62■□□□□ 0.73
PTPRU-207ENST00000492954 ZBTB6Q15916 424 aa19.62■□□□□ 0.73
PTPRU-207ENST00000492954 AXDND1Q5T1B0 1012 aaPredicted RBP19.62■□□□□ 0.73
PTPRU-207ENST00000492954 GET4Q7L5D6 327 aaPredicted RBP19.62■□□□□ 0.73
PTPRU-207ENST00000492954 ZNF720Q7Z2F6 126 aa19.62■□□□□ 0.73
PTPRU-207ENST00000492954 SUGP1Q8IWZ8 645 aaKnown RBP19.62■□□□□ 0.73
PTPRU-207ENST00000492954 SUSD3Q96L08 255 aa19.62■□□□□ 0.73
PTPRU-207ENST00000492954 RPF1Q9H9Y2 349 aaKnown RBP19.62■□□□□ 0.73
PTPRU-207ENST00000492954 KCNK12Q9HB15 430 aa19.62■□□□□ 0.73
PTPRU-207ENST00000492954 MYO10Q9HD67 2058 aa19.62■□□□□ 0.73
PTPRU-207ENST00000492954 MTCL1Q9Y4B5 1905 aaKnown RBP19.61■□□□□ 0.73
PTPRU-207ENST00000492954 SPTLC2O15270 562 aa19.61■□□□□ 0.73
PTPRU-207ENST00000492954 PPP1R37O75864 691 aa19.61■□□□□ 0.73
PTPRU-207ENST00000492954 LRPAP1P30533 357 aa19.61■□□□□ 0.73
PTPRU-207ENST00000492954 HOXA9P31269 272 aa19.61■□□□□ 0.73
PTPRU-207ENST00000492954 GUCY2FP51841 1108 aa19.61■□□□□ 0.73
PTPRU-207ENST00000492954 NTHL1P78549 312 aa19.61■□□□□ 0.73
PTPRU-207ENST00000492954 ROR1Q01973 937 aa19.61■□□□□ 0.73
PTPRU-207ENST00000492954 FOXD4L6Q3SYB3 417 aaPredicted RBP19.61■□□□□ 0.73
PTPRU-207ENST00000492954 SLC8B1Q6J4K2 584 aa19.61■□□□□ 0.73
PTPRU-207ENST00000492954 FOXD4L3Q6VB84 417 aaPredicted RBP19.61■□□□□ 0.73
PTPRU-207ENST00000492954 GRASPQ7Z6J2 395 aaPredicted RBP19.61■□□□□ 0.73
PTPRU-207ENST00000492954 PDILTQ8N807 584 aa19.61■□□□□ 0.73
PTPRU-207ENST00000492954 FAM212AQ96EL1 285 aa19.61■□□□□ 0.73
PTPRU-207ENST00000492954 ZNF396Q96N95 335 aaPredicted RBP19.61■□□□□ 0.73
PTPRU-207ENST00000492954 TBC1D7Q9P0N9 293 aa19.61■□□□□ 0.73
PTPRU-207ENST00000492954 CPSF3Q9UKF6 684 aaKnown RBP19.61■□□□□ 0.73
PTPRU-207ENST00000492954 UBQLN1Q9UMX0 589 aaKnown RBP19.61■□□□□ 0.73
PTPRU-207ENST00000492954 TBC1D4O60343 1298 aa19.6■□□□□ 0.73
PTPRU-207ENST00000492954 ADRB2P07550 413 aa19.6■□□□□ 0.73
PTPRU-207ENST00000492954 GAP43P17677 238 aa19.6■□□□□ 0.73
PTPRU-207ENST00000492954 ACOT2P49753 483 aa19.6■□□□□ 0.73
PTPRU-207ENST00000492954 TDGQ13569 410 aa19.6■□□□□ 0.73
PTPRU-207ENST00000492954 MRPL58Q14197 206 aaKnown RBP19.6■□□□□ 0.73
PTPRU-207ENST00000492954 JADE1Q6IE81 842 aa19.6■□□□□ 0.73
PTPRU-207ENST00000492954 RSAD2Q8WXG1 361 aa19.6■□□□□ 0.73
PTPRU-207ENST00000492954 STRA6Q9BX79 667 aa19.6■□□□□ 0.73
PTPRU-207ENST00000492954 MRPL44Q9H9J2 332 aaKnown RBP19.6■□□□□ 0.73
PTPRU-207ENST00000492954 EPS15L1Q9UBC2 864 aa19.6■□□□□ 0.73
PTPRU-207ENST00000492954 SEL1LQ9UBV2 794 aa19.6■□□□□ 0.73
PTPRU-207ENST00000492954 POLIQ9UNA4 740 aa19.6■□□□□ 0.73
PTPRU-207ENST00000492954 WDR27A2RRH5 827 aa19.59■□□□□ 0.73
PTPRU-207ENST00000492954 PPP6R2O75170 966 aa19.59■□□□□ 0.73
PTPRU-207ENST00000492954 XYLBO75191 536 aa19.59■□□□□ 0.73
PTPRU-207ENST00000492954 ZSCAN22P10073 491 aaPredicted RBP19.59■□□□□ 0.73
PTPRU-207ENST00000492954 IDEP14735 1019 aa19.59■□□□□ 0.73
PTPRU-207ENST00000492954 CYP3A5P20815 502 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms