RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 TDRD10Q5VZ19 366 aaKnown RBP20.12■□□□□ 0.81
MCF2L-230ENST00000491028 TRAPPC11Q7Z392 1133 aa20.12■□□□□ 0.81
MCF2L-230ENST00000491028 NAP1L5Q96NT1 182 aaPredicted RBP20.12■□□□□ 0.81
MCF2L-230ENST00000491028 MIOSQ9NXC5 875 aa20.12■□□□□ 0.81
MCF2L-230ENST00000491028 PLAGL2Q9UPG8 496 aa20.12■□□□□ 0.81
MCF2L-230ENST00000491028 COQ4Q9Y3A0 265 aa20.12■□□□□ 0.81
MCF2L-230ENST00000491028 SLC4A7Q9Y6M7 1214 aa20.12■□□□□ 0.81
MCF2L-230ENST00000491028 AFF1P51825 1210 aaKnown RBP20.11■□□□□ 0.81
MCF2L-230ENST00000491028 UBXN1Q04323 297 aa20.11■□□□□ 0.81
MCF2L-230ENST00000491028 TUSC3Q13454 348 aa20.11■□□□□ 0.81
MCF2L-230ENST00000491028 NR1I3Q14994 352 aa20.11■□□□□ 0.81
MCF2L-230ENST00000491028 NAB2Q15742 525 aa20.11■□□□□ 0.81
MCF2L-230ENST00000491028 LRRC43Q8N309 656 aa20.11■□□□□ 0.81
MCF2L-230ENST00000491028 C1orf127Q8N9H9 656 aa20.11■□□□□ 0.81
MCF2L-230ENST00000491028 ZNF689Q96CS4 500 aaPredicted RBP20.11■□□□□ 0.81
MCF2L-230ENST00000491028 GDF15Q99988 308 aa20.11■□□□□ 0.81
MCF2L-230ENST00000491028 TRIM5Q9C035 493 aa20.11■□□□□ 0.81
MCF2L-230ENST00000491028 XPO4Q9C0E2 1151 aaKnown RBP20.11■□□□□ 0.81
MCF2L-230ENST00000491028 RC3H2Q9HBD1 1191 aaKnown RBP20.11■□□□□ 0.81
MCF2L-230ENST00000491028 DPP3Q9NY33 737 aa20.11■□□□□ 0.81
MCF2L-230ENST00000491028 CXXC1Q9P0U4 656 aaPredicted RBP20.11■□□□□ 0.81
MCF2L-230ENST00000491028 TUBGCP4Q9UGJ1 667 aa20.11■□□□□ 0.81
MCF2L-230ENST00000491028 TBKBP1A7MCY6 615 aa20.1■□□□□ 0.81
MCF2L-230ENST00000491028 AP5Z1O43299 807 aa20.1■□□□□ 0.81
MCF2L-230ENST00000491028 PHACTR2O75167 634 aa20.1■□□□□ 0.81
MCF2L-230ENST00000491028 POMCP01189 267 aa20.1■□□□□ 0.81
MCF2L-230ENST00000491028 LRPAP1P30533 357 aa20.1■□□□□ 0.81
MCF2L-230ENST00000491028 EPC2Q52LR7 807 aa20.1■□□□□ 0.81
MCF2L-230ENST00000491028 GBP6Q6ZN66 633 aa20.1■□□□□ 0.81
MCF2L-230ENST00000491028 CMTR2Q8IYT2 770 aaKnown RBP20.1■□□□□ 0.81
MCF2L-230ENST00000491028 FBXL13Q8NEE6 735 aa20.1■□□□□ 0.81
MCF2L-230ENST00000491028 C18orf25Q96B23 403 aaPredicted RBP20.1■□□□□ 0.81
MCF2L-230ENST00000491028 UROC1Q96N76 676 aa20.1■□□□□ 0.81
MCF2L-230ENST00000491028 ERGIC2Q96RQ1 377 aa20.1■□□□□ 0.81
MCF2L-230ENST00000491028 TBC1D13Q9NVG8 400 aa20.1■□□□□ 0.81
MCF2L-230ENST00000491028 A0A1W2PQC6 194 aa20.09■□□□□ 0.81
MCF2L-230ENST00000491028 H0YGN5 161 aa20.09■□□□□ 0.81
MCF2L-230ENST00000491028 GJB5O95377 273 aa20.09■□□□□ 0.81
MCF2L-230ENST00000491028 ITGB3P05106 788 aa20.09■□□□□ 0.81
MCF2L-230ENST00000491028 PIK3CAP42336 1068 aa20.09■□□□□ 0.81
MCF2L-230ENST00000491028 RNASELQ05823 741 aaKnown RBP20.09■□□□□ 0.81
MCF2L-230ENST00000491028 SOX4Q06945 474 aaPredicted RBP20.09■□□□□ 0.81
MCF2L-230ENST00000491028 DSC1Q08554 894 aa20.09■□□□□ 0.81
MCF2L-230ENST00000491028 NCOA4Q13772 614 aa20.09■□□□□ 0.81
MCF2L-230ENST00000491028 EXOC3L4Q17RC7 722 aa20.09■□□□□ 0.81
MCF2L-230ENST00000491028 UBE2OQ9C0C9 1292 aaKnown RBP20.09■□□□□ 0.81
MCF2L-230ENST00000491028 GCNT4Q9P109 453 aa20.09■□□□□ 0.81
MCF2L-230ENST00000491028 R3HCC1Q9Y3T6 440 aaKnown RBP20.09■□□□□ 0.81
MCF2L-230ENST00000491028 ANO9A1A5B4 782 aa20.08■□□□□ 0.81
MCF2L-230ENST00000491028 TEX33O43247 280 aa20.08■□□□□ 0.81
MCF2L-230ENST00000491028 VNN1O95497 513 aa20.08■□□□□ 0.81
MCF2L-230ENST00000491028 HLA-DRAP01903 254 aa20.08■□□□□ 0.81
MCF2L-230ENST00000491028 ATP2A2P16615 1042 aaKnown RBP20.08■□□□□ 0.81
MCF2L-230ENST00000491028 RPL9P32969 192 aaKnown RBP20.08■□□□□ 0.81
MCF2L-230ENST00000491028 GATMP50440 423 aa20.08■□□□□ 0.81
MCF2L-230ENST00000491028 RBP5P82980 135 aa20.08■□□□□ 0.81
MCF2L-230ENST00000491028 HTRA4P83105 476 aaPredicted RBP20.08■□□□□ 0.81
MCF2L-230ENST00000491028 TRPC3Q13507 836 aa20.08■□□□□ 0.81
MCF2L-230ENST00000491028 PRPF38BQ5VTL8 546 aaKnown RBP20.08■□□□□ 0.81
MCF2L-230ENST00000491028 HERC6Q8IVU3 1022 aa20.08■□□□□ 0.81
MCF2L-230ENST00000491028 LRRC52Q8N7C0 313 aa20.08■□□□□ 0.81
MCF2L-230ENST00000491028 CXorf38Q8TB03 319 aa20.08■□□□□ 0.81
MCF2L-230ENST00000491028 TAS1R2Q8TE23 839 aa20.08■□□□□ 0.81
MCF2L-230ENST00000491028 DDX27Q96GQ7 796 aaKnown RBP20.08■□□□□ 0.81
MCF2L-230ENST00000491028 MRFAP1L1Q96HT8 127 aa20.08■□□□□ 0.81
MCF2L-230ENST00000491028 FAM84AQ96KN4 292 aa20.08■□□□□ 0.81
MCF2L-230ENST00000491028 RNPC3Q96LT9 517 aaKnown RBP20.08■□□□□ 0.81
MCF2L-230ENST00000491028 FAM193BQ96PV7 902 aaPredicted RBP20.08■□□□□ 0.81
MCF2L-230ENST00000491028 YME1L1Q96TA2 773 aa20.08■□□□□ 0.81
MCF2L-230ENST00000491028 IMPG2Q9BZV3 1241 aa20.08■□□□□ 0.81
MCF2L-230ENST00000491028 RAB20Q9NX57 234 aa20.08■□□□□ 0.81
MCF2L-230ENST00000491028 SIX4Q9UIU6 781 aa20.08■□□□□ 0.81
MCF2L-230ENST00000491028 ZC3H11AO75152 810 aaKnown RBP eCLIP20.07■□□□□ 0.8
MCF2L-230ENST00000491028 STAU1O95793 577 aaKnown RBP20.07■□□□□ 0.8
MCF2L-230ENST00000491028 POLR2BP30876 1174 aaKnown RBP20.07■□□□□ 0.8
MCF2L-230ENST00000491028 ATICP31939 592 aa20.07■□□□□ 0.8
MCF2L-230ENST00000491028 PNPLA4P41247 253 aa20.07■□□□□ 0.8
MCF2L-230ENST00000491028 ZNF75DP51815 510 aa20.07■□□□□ 0.8
MCF2L-230ENST00000491028 GUCY2FP51841 1108 aa20.07■□□□□ 0.8
MCF2L-230ENST00000491028 C9orf50Q5SZB4 431 aa20.07■□□□□ 0.8
MCF2L-230ENST00000491028 C9orf57Q5W0N0 161 aa20.07■□□□□ 0.8
MCF2L-230ENST00000491028 FAM117BQ6P1L5 589 aa20.07■□□□□ 0.8
MCF2L-230ENST00000491028 CCDC150Q8NCX0 1101 aa20.07■□□□□ 0.8
MCF2L-230ENST00000491028 TAF4BQ92750 862 aa20.07■□□□□ 0.8
MCF2L-230ENST00000491028 ZNF560Q96MR9 790 aa20.07■□□□□ 0.8
MCF2L-230ENST00000491028 GOLGA2P5Q9HBQ8 144 aa20.07■□□□□ 0.8
MCF2L-230ENST00000491028 INSL6Q9Y581 213 aa20.07■□□□□ 0.8
MCF2L-230ENST00000491028 CARNS1A5YM72 827 aa20.06■□□□□ 0.8
MCF2L-230ENST00000491028 PIRO00625 290 aa20.06■□□□□ 0.8
MCF2L-230ENST00000491028 CST3P01034 146 aaPredicted RBP20.06■□□□□ 0.8
MCF2L-230ENST00000491028 KRT19P08727 400 aa20.06■□□□□ 0.8
MCF2L-230ENST00000491028 PAX3P23760 479 aa20.06■□□□□ 0.8
MCF2L-230ENST00000491028 BMP8BP34820 402 aa20.06■□□□□ 0.8
MCF2L-230ENST00000491028 PBX1P40424 430 aa20.06■□□□□ 0.8
MCF2L-230ENST00000491028 SYCP1Q15431 976 aa20.06■□□□□ 0.8
MCF2L-230ENST00000491028 SHHQ15465 462 aa20.06■□□□□ 0.8
MCF2L-230ENST00000491028 SGSM1Q2NKQ1 1148 aa20.06■□□□□ 0.8
MCF2L-230ENST00000491028 PAN2Q504Q3 1202 aaKnown RBP20.06■□□□□ 0.8
MCF2L-230ENST00000491028 TMCO2Q7Z6W1 182 aaPredicted RBP20.06■□□□□ 0.8
MCF2L-230ENST00000491028 COLGALT2Q8IYK4 626 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms