RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 NR1H3Q13133 447 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 TMEM132DQ14C87 1099 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 CCL15Q16663 113 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 DGKDQ16760 1214 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 DCAF4L1Q3SXM0 396 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 ZNF394Q53GI3 561 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 FAM47CQ5HY64 1035 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 CENPUQ71F23 418 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 SESTD1Q86VW0 696 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 VCPIP1Q96JH7 1222 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 ZNF560Q96MR9 790 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 ERP44Q9BS26 406 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 APOL6Q9BWW8 343 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 FGFBP2Q9BYJ0 223 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 FAM49AQ9H0Q0 323 aaPredicted RBP7.81□□□□□ -1.16
NPHP3-208ENST00000490993 ASCC2Q9H1I8 757 aaPredicted RBP7.81□□□□□ -1.16
NPHP3-208ENST00000490993 CAPN9O14815 690 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 TTI1O43156 1089 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 STRNO43815 780 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 ADCY3O60266 1144 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 DDNO94850 711 aaPredicted RBP7.8□□□□□ -1.16
NPHP3-208ENST00000490993 MMEP08473 750 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 HOXC6P09630 235 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 MRPS9P82933 396 aaKnown RBP7.8□□□□□ -1.16
NPHP3-208ENST00000490993 UAP1Q16222 522 aaPredicted RBP7.8□□□□□ -1.16
NPHP3-208ENST00000490993 METTL23Q86XA0 190 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 ARHGEF19Q8IW93 802 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 ZC3H3Q8IXZ2 948 aaKnown RBP7.8□□□□□ -1.16
NPHP3-208ENST00000490993 EFCAB13Q8IY85 973 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 GABPB2Q8TAK5 448 aaPredicted RBP7.8□□□□□ -1.16
NPHP3-208ENST00000490993 ZC3H15Q8WU90 426 aaKnown RBP7.8□□□□□ -1.16
NPHP3-208ENST00000490993 OPTNQ96CV9 577 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 M0QYV0 167 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 FZD9O00144 591 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 NOL4O94818 638 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 ICAM3P32942 547 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 MKRN3Q13064 507 aaKnown RBP7.8□□□□□ -1.16
NPHP3-208ENST00000490993 HGSNATQ68CP4 663 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 TRMT10CQ7L0Y3 403 aaKnown RBP7.8□□□□□ -1.16
NPHP3-208ENST00000490993 JAMLQ86YT9 394 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 CCDC60Q8IWA6 550 aaPredicted RBP7.8□□□□□ -1.16
NPHP3-208ENST00000490993 FEZF2Q8TBJ5 459 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 VTA1Q9NP79 307 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 SMARCAL1Q9NZC9 954 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 RCCD1A6NED2 376 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 CYP2C19P33261 490 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 GRM1Q13255 1194 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 TTC31Q49AM3 519 aaPredicted RBP7.8□□□□□ -1.16
NPHP3-208ENST00000490993 AGBL2Q5U5Z8 902 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 MMS22LQ6ZRQ5 1243 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 ARHGEF18Q6ZSZ5 1173 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 OR6B3Q8NGW1 331 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 C18orf8Q96DM3 657 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 KIF12Q96FN5 646 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 PPP1R16BQ96T49 567 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 PI4K2AQ9BTU6 479 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 AVENQ9NQS1 362 aaPredicted RBP7.8□□□□□ -1.16
NPHP3-208ENST00000490993 A0A0U1RQJ8 604 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 ANKRD63C9JTQ0 380 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 ATICP31939 592 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 ARL4AP40617 200 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 CARSP49589 748 aaKnown RBP7.8□□□□□ -1.16
NPHP3-208ENST00000490993 LAMTOR4Q0VGL1 99 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 WDR72Q3MJ13 1102 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 DARS2Q6PI48 645 aaKnown RBP7.8□□□□□ -1.16
NPHP3-208ENST00000490993 SLC13A5Q86YT5 568 aaPredicted RBP7.8□□□□□ -1.16
NPHP3-208ENST00000490993 LRRC71Q8N4P6 559 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 MFSD14AQ96MC6 490 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 ZCCHC17Q9NP64 241 aaKnown RBP7.8□□□□□ -1.16
NPHP3-208ENST00000490993 KIAA1257Q9ULG3 409 aa7.8□□□□□ -1.16
NPHP3-208ENST00000490993 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.8□□□□□ -1.16
NPHP3-208ENST00000490993 MYH15Q9Y2K3 1946 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 ATP9AO75110 1047 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 KRT3P12035 628 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 UBA1P22314 1058 aaKnown RBP7.79□□□□□ -1.16
NPHP3-208ENST00000490993 PPP3CAQ08209 521 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 ABHD15Q6UXT9 468 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 PLPPR4Q7Z2D5 763 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 NT5DC3Q86UY8 548 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 TRPM4Q8TD43 1214 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 SLC20A1Q8WUM9 679 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 TRAIPQ9BWF2 469 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 CALN1Q9BXU9 219 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 FRMD8P1Q9BZ68 369 aaPredicted RBP7.79□□□□□ -1.16
NPHP3-208ENST00000490993 PRM3Q9NNZ6 103 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 DMAC2Q9NW81 257 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 AFG3L2Q9Y4W6 797 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 HUS1O60921 280 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 PPP2R2AP63151 447 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 JAG1P78504 1218 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 IL9RQ01113 521 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 KRT17Q04695 432 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 EPC2Q52LR7 807 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 ANO5Q75V66 913 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 BRSK2Q8IWQ3 736 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 FAM71AQ8IYT1 594 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 C7orf31Q8N865 590 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 SHCBP1Q8NEM2 672 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 CASKIN2Q8WXE0 1202 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 CDCA5Q96FF9 252 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms