RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 CEP63Q96MT8 703 aa18.12■□□□□ 0.49
SFXN5-220ENST00000490056 FNBP1Q96RU3 617 aa18.12■□□□□ 0.49
SFXN5-220ENST00000490056 CGRRF1Q99675 332 aa18.12■□□□□ 0.49
SFXN5-220ENST00000490056 MKNK1Q9BUB5 465 aa18.12■□□□□ 0.49
SFXN5-220ENST00000490056 ALG13Q9NP73 1137 aaKnown RBP18.12■□□□□ 0.49
SFXN5-220ENST00000490056 INTS13Q9NVM9 706 aa18.12■□□□□ 0.49
SFXN5-220ENST00000490056 TMEM265A0A087WTH1 108 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 C5orf67F2Z3F1 127 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 PODXLO00592 558 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 PPEF2O14830 753 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 SLC16A3O15427 465 aaKnown RBP18.11■□□□□ 0.49
SFXN5-220ENST00000490056 XPOTO43592 962 aaKnown RBP18.11■□□□□ 0.49
SFXN5-220ENST00000490056 FGF18O76093 207 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 RB1P06400 928 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 TMEM191BP0C7N4 346 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 TRIM49P0CI25 452 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 TRIM49CP0CI26 452 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 KRT13P13646 458 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 TNNI1P19237 187 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 CYP3A5P20815 502 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 VAMP7P51809 220 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 GPM6BQ13491 265 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 GRIN2CQ14957 1233 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 UPP1Q16831 310 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 ANO6Q4KMQ2 910 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 CT47A1Q5JQC4 288 aaPredicted RBP18.11■□□□□ 0.49
SFXN5-220ENST00000490056 C1orf220Q5T0J3 134 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 ZNF697Q5TEC3 545 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 Q7L0L9 218 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 NT5DC4Q86YG4 428 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 TMC2Q8TDI7 906 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 GDPD5Q8WTR4 605 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 IGSF21Q96ID5 467 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 COLEC11Q9BWP8 271 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 PLVAPQ9BX97 442 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 MTMR12Q9C0I1 747 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 PRDM12Q9H4Q4 367 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 MARCH5Q9NX47 278 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 DPP3Q9NY33 737 aa18.11■□□□□ 0.49
SFXN5-220ENST00000490056 LAMA3Q16787 3333 aa18.1■□□□□ 0.49
SFXN5-220ENST00000490056 GRM6O15303 877 aa18.1■□□□□ 0.49
SFXN5-220ENST00000490056 KIF4AO95239 1232 aa18.1■□□□□ 0.49
SFXN5-220ENST00000490056 CCDC192P0DO97 292 aa18.1■□□□□ 0.49
SFXN5-220ENST00000490056 LRPAP1P30533 357 aa18.1■□□□□ 0.49
SFXN5-220ENST00000490056 TPD52L1Q16890 204 aaPredicted RBP18.1■□□□□ 0.49
SFXN5-220ENST00000490056 DUOXA2Q1HG44 320 aa18.1■□□□□ 0.49
SFXN5-220ENST00000490056 CCDC40Q4G0X9 1142 aa18.1■□□□□ 0.49
SFXN5-220ENST00000490056 DCLRE1AQ6PJP8 1040 aa18.1■□□□□ 0.49
SFXN5-220ENST00000490056 CD300LGQ6UXG3 332 aa18.1■□□□□ 0.49
SFXN5-220ENST00000490056 INTS8Q75QN2 995 aaKnown RBP18.1■□□□□ 0.49
SFXN5-220ENST00000490056 WDR49Q8IV35 697 aa18.1■□□□□ 0.49
SFXN5-220ENST00000490056 C1orf127Q8N9H9 656 aa18.1■□□□□ 0.49
SFXN5-220ENST00000490056 C3orf58Q8NDZ4 430 aa18.1■□□□□ 0.49
SFXN5-220ENST00000490056 SPPL3Q8TCT6 385 aa18.1■□□□□ 0.49
SFXN5-220ENST00000490056 CACTINQ8WUQ7 758 aaKnown RBP18.1■□□□□ 0.49
SFXN5-220ENST00000490056 DDX27Q96GQ7 796 aaKnown RBP18.1■□□□□ 0.49
SFXN5-220ENST00000490056 ANKRD36BP1Q96IX9 119 aa18.1■□□□□ 0.49
SFXN5-220ENST00000490056 UROC1Q96N76 676 aa18.1■□□□□ 0.49
SFXN5-220ENST00000490056 C11orf84Q9BUA3 381 aaPredicted RBP18.1■□□□□ 0.49
SFXN5-220ENST00000490056 PLXNA4Q9HCM2 1894 aa18.09■□□□□ 0.49
SFXN5-220ENST00000490056 H3BNC9 293 aa18.09■□□□□ 0.49
SFXN5-220ENST00000490056 TADA2AO75478 443 aa18.09■□□□□ 0.49
SFXN5-220ENST00000490056 B3GAT3O94766 335 aa18.09■□□□□ 0.49
SFXN5-220ENST00000490056 CSPG5O95196 566 aa18.09■□□□□ 0.49
SFXN5-220ENST00000490056 RPL9P32969 192 aaKnown RBP18.09■□□□□ 0.49
SFXN5-220ENST00000490056 PPM1AP35813 382 aa18.09■□□□□ 0.49
SFXN5-220ENST00000490056 BFSP1Q12934 665 aa18.09■□□□□ 0.49
SFXN5-220ENST00000490056 C9orf57Q5W0N0 161 aa18.09■□□□□ 0.49
SFXN5-220ENST00000490056 IRF2BP1Q8IU81 584 aa18.09■□□□□ 0.49
SFXN5-220ENST00000490056 TMEM169Q96HH4 297 aa18.09■□□□□ 0.49
SFXN5-220ENST00000490056 VN1R3Q9BXE9 311 aa18.09■□□□□ 0.49
SFXN5-220ENST00000490056 ARMCX3Q9UH62 379 aaPredicted RBP18.09■□□□□ 0.49
SFXN5-220ENST00000490056 SIX4Q9UIU6 781 aa18.09■□□□□ 0.49
SFXN5-220ENST00000490056 ADAM28Q9UKQ2 775 aa18.09■□□□□ 0.49
SFXN5-220ENST00000490056 ANO9A1A5B4 782 aa18.08■□□□□ 0.48
SFXN5-220ENST00000490056 FGFR1OPO95684 399 aaKnown RBP18.08■□□□□ 0.48
SFXN5-220ENST00000490056 TNNC2P02585 160 aa18.08■□□□□ 0.48
SFXN5-220ENST00000490056 ITGB3P05106 788 aa18.08■□□□□ 0.48
SFXN5-220ENST00000490056 DNAJB1P25685 340 aa18.08■□□□□ 0.48
SFXN5-220ENST00000490056 BRCC3P46736 316 aa18.08■□□□□ 0.48
SFXN5-220ENST00000490056 CLDN10P78369 228 aa18.08■□□□□ 0.48
SFXN5-220ENST00000490056 PLCB3Q01970 1234 aa18.08■□□□□ 0.48
SFXN5-220ENST00000490056 PPP3CAQ08209 521 aa18.08■□□□□ 0.48
SFXN5-220ENST00000490056 HSP90AA4PQ58FG1 418 aa18.08■□□□□ 0.48
SFXN5-220ENST00000490056 TAS1R1Q7RTX1 841 aa18.08■□□□□ 0.48
SFXN5-220ENST00000490056 TRAPPC11Q7Z392 1133 aa18.08■□□□□ 0.48
SFXN5-220ENST00000490056 CREBRFQ8IUR6 639 aa18.08■□□□□ 0.48
SFXN5-220ENST00000490056 CXorf38Q8TB03 319 aa18.08■□□□□ 0.48
SFXN5-220ENST00000490056 ENOX1Q8TC92 643 aaKnown RBP18.08■□□□□ 0.48
SFXN5-220ENST00000490056 POF1BQ8WVV4 589 aa18.08■□□□□ 0.48
SFXN5-220ENST00000490056 GPR62Q9BZJ7 368 aa18.08■□□□□ 0.48
SFXN5-220ENST00000490056 MMRN2Q9H8L6 949 aa18.08■□□□□ 0.48
SFXN5-220ENST00000490056 SAMSN1Q9NSI8 373 aaKnown RBP18.08■□□□□ 0.48
SFXN5-220ENST00000490056 AGAP1Q9UPQ3 857 aa18.08■□□□□ 0.48
SFXN5-220ENST00000490056 SCN1AP35498 2009 aa18.07■□□□□ 0.48
SFXN5-220ENST00000490056 CARNS1A5YM72 827 aa18.07■□□□□ 0.48
SFXN5-220ENST00000490056 I3L4J1 428 aa18.07■□□□□ 0.48
SFXN5-220ENST00000490056 PIRO00625 290 aa18.07■□□□□ 0.48
SFXN5-220ENST00000490056 LPXNO60711 386 aa18.07■□□□□ 0.48
SFXN5-220ENST00000490056 KRT19P08727 400 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms