RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 DYDC2Q96IM9 177 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 ANKEF1Q9NU02 776 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 CARNS1A5YM72 827 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 SNTNA6NMZ2 147 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 FXR2P51116 673 aaKnown RBP eCLIP9.3□□□□□ -0.92
LSAMP-205ENST00000490035 OSTNP61366 133 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 SV2CQ496J9 727 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 IER5Q5VY09 327 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 MRPL48Q96GC5 212 aaKnown RBP9.3□□□□□ -0.92
LSAMP-205ENST00000490035 SERPINB12Q96P63 405 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 TRIM9Q9C026 710 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 RIC8BQ9NVN3 520 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 TRAF3IP3Q9Y228 551 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 DIP2AQ14689 1571 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 POTECB2RU33 542 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 ECM2O94769 699 aaPredicted RBP9.3□□□□□ -0.92
LSAMP-205ENST00000490035 MYL3P08590 195 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 UBXN2AP68543 259 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 IRX1P78414 480 aaPredicted RBP9.3□□□□□ -0.92
LSAMP-205ENST00000490035 HDLBPQ00341 1268 aaKnown RBP9.3□□□□□ -0.92
LSAMP-205ENST00000490035 CSTF3Q12996 717 aaKnown RBP9.3□□□□□ -0.92
LSAMP-205ENST00000490035 RBBP7Q16576 425 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 SPATA33Q96N06 139 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 DACH2Q96NX9 599 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 SMYD3Q9H7B4 428 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 HDAC6Q9UBN7 1215 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 GABBR1Q9UBS5 961 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 NEDD4P46934 1319 aa9.3□□□□□ -0.92
LSAMP-205ENST00000490035 TLR2O60603 784 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 PRLRP16471 622 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 MARK3P27448 753 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 PGM1P36871 562 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 TAB3Q8N5C8 712 aaPredicted RBP9.29□□□□□ -0.92
LSAMP-205ENST00000490035 AFG1LQ8WV93 481 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 POTEMA6NI47 508 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 RRN3P2A6NIE6 340 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 FDFT1P37268 417 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 CACNB1Q02641 598 aaPredicted RBP9.29□□□□□ -0.92
LSAMP-205ENST00000490035 FASTKD1Q53R41 847 aaKnown RBP9.29□□□□□ -0.92
LSAMP-205ENST00000490035 EFHC1Q5JVL4 640 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 GANCQ8TET4 914 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 DYNLL2Q96FJ2 89 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 FAM161BQ96MY7 647 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 AIPL1Q9NZN9 384 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 TRPC5OSA6NMA1 111 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 PSMD14O00487 310 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 SLC25A27O95847 323 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 NSUN2Q08J23 767 aaKnown RBP eCLIP9.29□□□□□ -0.92
LSAMP-205ENST00000490035 MRPL28Q13084 256 aaKnown RBP9.29□□□□□ -0.92
LSAMP-205ENST00000490035 NR1I3Q14994 352 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 ABTB1Q969K4 478 aaPredicted RBP9.29□□□□□ -0.92
LSAMP-205ENST00000490035 RIT2Q99578 217 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 PSTPIP1O43586 416 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 TMCO4Q5TGY1 634 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 TBC1D23Q9NUY8 699 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 ZC3H11AO75152 810 aaKnown RBP eCLIP9.29□□□□□ -0.92
LSAMP-205ENST00000490035 FMO5P49326 533 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 C11orf70Q9BRQ4 267 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 A8MXQ7 604 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 RAD17O75943 681 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 FNTAP49354 379 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 EXOSC10Q01780 885 aaKnown RBP9.29□□□□□ -0.92
LSAMP-205ENST00000490035 POU5F1BQ06416 359 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 PRPF18Q99633 342 aaKnown RBP9.29□□□□□ -0.92
LSAMP-205ENST00000490035 TRABDQ9H4I3 376 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 DHX35Q9H5Z1 703 aaKnown RBP9.29□□□□□ -0.92
LSAMP-205ENST00000490035 C10orf88Q9H8K7 445 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 MYO3AQ8NEV4 1616 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 CFAP99D6REC4 459 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 EIF3HO15372 352 aaKnown RBP eCLIP9.29□□□□□ -0.92
LSAMP-205ENST00000490035 ECE2O60344 883 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 SLC4A1P02730 911 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 STIP1P31948 543 aaKnown RBP9.29□□□□□ -0.92
LSAMP-205ENST00000490035 MRPS35P82673 323 aaKnown RBP9.29□□□□□ -0.92
LSAMP-205ENST00000490035 SCN4BQ8IWT1 228 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 TAGAPQ8N103 731 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 APPL2Q8NEU8 664 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 OR6P1Q8NGX9 317 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 RIN3Q8TB24 985 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 RSPH1Q8WYR4 309 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 KIF12Q96FN5 646 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 SCN3BQ9NY72 215 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 ENTPD3O75355 529 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 PDAP1Q13442 181 aaKnown RBP9.29□□□□□ -0.92
LSAMP-205ENST00000490035 MOXD1Q6UVY6 613 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 THNSL1Q8IYQ7 743 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 CEP70Q8NHQ1 597 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 CDC26Q8NHZ8 85 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 PRMT7Q9NVM4 692 aaPredicted RBP9.29□□□□□ -0.92
LSAMP-205ENST00000490035 CDYLQ9Y232 598 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.29□□□□□ -0.92
LSAMP-205ENST00000490035 TCHHQ07283 1943 aa9.29□□□□□ -0.92
LSAMP-205ENST00000490035 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.28□□□□□ -0.92
LSAMP-205ENST00000490035 COG2Q14746 738 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 CYB5R4Q7L1T6 521 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 TEX13BQ9BXU2 312 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 GOLPH3Q9H4A6 298 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 MYH10P35580 1976 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 CD2BP2O95400 341 aaKnown RBP9.28□□□□□ -0.92
LSAMP-205ENST00000490035 CAPRIN2Q6IMN6 1127 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms