RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 DNMT3BQ9UBC3 853 aaKnown RBP21.23■□□□□ 0.99
TNFRSF1B-202ENST00000489921 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.23■□□□□ 0.99
TNFRSF1B-202ENST00000489921 SLC26A4O43511 780 aa21.22■□□□□ 0.99
TNFRSF1B-202ENST00000489921 ABLIM3O94929 683 aa21.22■□□□□ 0.99
TNFRSF1B-202ENST00000489921 SRFP11831 508 aa21.22■□□□□ 0.99
TNFRSF1B-202ENST00000489921 SMTNP53814 917 aa21.22■□□□□ 0.99
TNFRSF1B-202ENST00000489921 STRN3Q13033 797 aa21.22■□□□□ 0.99
TNFRSF1B-202ENST00000489921 NOLC1Q14978 699 aaKnown RBP eCLIP21.22■□□□□ 0.99
TNFRSF1B-202ENST00000489921 VARS2Q5ST30 1063 aaKnown RBP21.22■□□□□ 0.99
TNFRSF1B-202ENST00000489921 POTEHQ6S545 545 aa21.22■□□□□ 0.99
TNFRSF1B-202ENST00000489921 PARM1Q6UWI2 310 aa21.22■□□□□ 0.99
TNFRSF1B-202ENST00000489921 ATOH1Q92858 354 aaPredicted RBP21.22■□□□□ 0.99
TNFRSF1B-202ENST00000489921 FGF14Q92915 247 aa21.22■□□□□ 0.99
TNFRSF1B-202ENST00000489921 REEP2Q9BRK0 252 aa21.22■□□□□ 0.99
TNFRSF1B-202ENST00000489921 UPF2Q9HAU5 1272 aaKnown RBP21.22■□□□□ 0.99
TNFRSF1B-202ENST00000489921 ANKFY1Q9P2R3 1169 aa21.22■□□□□ 0.99
TNFRSF1B-202ENST00000489921 KCNG1Q9UIX4 513 aa21.22■□□□□ 0.99
TNFRSF1B-202ENST00000489921 NUMBLQ9Y6R0 609 aa21.22■□□□□ 0.99
TNFRSF1B-202ENST00000489921 FRYLO94915 3013 aa21.22■□□□□ 0.99
TNFRSF1B-202ENST00000489921 FAM189A1O60320 539 aa21.21■□□□□ 0.99
TNFRSF1B-202ENST00000489921 RPL9P32969 192 aaKnown RBP21.21■□□□□ 0.99
TNFRSF1B-202ENST00000489921 ZNF131P52739 623 aa21.21■□□□□ 0.99
TNFRSF1B-202ENST00000489921 RTL10Q7L3V2 364 aa21.21■□□□□ 0.99
TNFRSF1B-202ENST00000489921 HAUS6Q7Z4H7 955 aa21.21■□□□□ 0.99
TNFRSF1B-202ENST00000489921 GPR152Q8TDT2 470 aa21.21■□□□□ 0.99
TNFRSF1B-202ENST00000489921 FGF13Q92913 245 aa21.21■□□□□ 0.99
TNFRSF1B-202ENST00000489921 CDK5RAP3Q96JB5 506 aa21.21■□□□□ 0.99
TNFRSF1B-202ENST00000489921 FIZ1Q96SL8 496 aa21.21■□□□□ 0.99
TNFRSF1B-202ENST00000489921 IRF2BPLQ9H1B7 796 aa21.21■□□□□ 0.99
TNFRSF1B-202ENST00000489921 FBXL21Q9UKT6 434 aa21.21■□□□□ 0.99
TNFRSF1B-202ENST00000489921 CDH7Q9ULB5 785 aa21.21■□□□□ 0.99
TNFRSF1B-202ENST00000489921 ZFP37Q9Y6Q3 630 aaPredicted RBP21.21■□□□□ 0.99
TNFRSF1B-202ENST00000489921 WDR27A2RRH5 827 aa21.2■□□□□ 0.98
TNFRSF1B-202ENST00000489921 CLDN3O15551 220 aa21.2■□□□□ 0.98
TNFRSF1B-202ENST00000489921 ROR1Q01973 937 aa21.2■□□□□ 0.98
TNFRSF1B-202ENST00000489921 KARSQ15046 597 aaKnown RBP21.2■□□□□ 0.98
TNFRSF1B-202ENST00000489921 ZBTB6Q15916 424 aa21.2■□□□□ 0.98
TNFRSF1B-202ENST00000489921 BRAPQ7Z569 592 aa21.2■□□□□ 0.98
TNFRSF1B-202ENST00000489921 GPBP1Q86WP2 473 aa21.2■□□□□ 0.98
TNFRSF1B-202ENST00000489921 ZNF461Q8TAF7 563 aa21.2■□□□□ 0.98
TNFRSF1B-202ENST00000489921 LARSQ9P2J5 1176 aaKnown RBP21.2■□□□□ 0.98
TNFRSF1B-202ENST00000489921 TUBGCP4Q9UGJ1 667 aa21.2■□□□□ 0.98
TNFRSF1B-202ENST00000489921 ODF2LQ9ULJ1 636 aa21.2■□□□□ 0.98
TNFRSF1B-202ENST00000489921 COL4A3Q01955 1670 aa21.19■□□□□ 0.98
TNFRSF1B-202ENST00000489921 TTC26A0AVF1 554 aa21.19■□□□□ 0.98
TNFRSF1B-202ENST00000489921 ARHGEF37A1IGU5 675 aa21.19■□□□□ 0.98
TNFRSF1B-202ENST00000489921 PROB1E7EW31 1015 aa21.19■□□□□ 0.98
TNFRSF1B-202ENST00000489921 SYN3O14994 580 aa21.19■□□□□ 0.98
TNFRSF1B-202ENST00000489921 XYLBO75191 536 aa21.19■□□□□ 0.98
TNFRSF1B-202ENST00000489921 CXCL8P10145 99 aa21.19■□□□□ 0.98
TNFRSF1B-202ENST00000489921 PLCG1P19174 1290 aa21.19■□□□□ 0.98
TNFRSF1B-202ENST00000489921 UBA7P41226 1012 aa21.19■□□□□ 0.98
TNFRSF1B-202ENST00000489921 TNFSF9P41273 254 aa21.19■□□□□ 0.98
TNFRSF1B-202ENST00000489921 SPAG1Q07617 926 aa21.19■□□□□ 0.98
TNFRSF1B-202ENST00000489921 MCM6Q14566 821 aa21.19■□□□□ 0.98
TNFRSF1B-202ENST00000489921 SF3A1Q15459 793 aaKnown RBP21.19■□□□□ 0.98
TNFRSF1B-202ENST00000489921 SUSD3Q96L08 255 aa21.19■□□□□ 0.98
TNFRSF1B-202ENST00000489921 SLC2A4RGQ9NR83 387 aa21.19■□□□□ 0.98
TNFRSF1B-202ENST00000489921 CA14Q9ULX7 337 aa21.19■□□□□ 0.98
TNFRSF1B-202ENST00000489921 POLIQ9UNA4 740 aa21.19■□□□□ 0.98
TNFRSF1B-202ENST00000489921 SEC24AO95486 1093 aa21.18■□□□□ 0.98
TNFRSF1B-202ENST00000489921 PIGRP01833 764 aa21.18■□□□□ 0.98
TNFRSF1B-202ENST00000489921 ADRB2P07550 413 aa21.18■□□□□ 0.98
TNFRSF1B-202ENST00000489921 LONP1P36776 959 aaKnown RBP21.18■□□□□ 0.98
TNFRSF1B-202ENST00000489921 DHX8Q14562 1220 aaKnown RBP21.18■□□□□ 0.98
TNFRSF1B-202ENST00000489921 PTPAQ15257 358 aa21.18■□□□□ 0.98
TNFRSF1B-202ENST00000489921 ZBTB41Q5SVQ8 909 aa21.18■□□□□ 0.98
TNFRSF1B-202ENST00000489921 SLC39A4Q6P5W5 647 aa21.18■□□□□ 0.98
TNFRSF1B-202ENST00000489921 USP49Q70CQ1 688 aa21.18■□□□□ 0.98
TNFRSF1B-202ENST00000489921 CCDC105Q8IYK2 499 aa21.18■□□□□ 0.98
TNFRSF1B-202ENST00000489921 RAD54LQ92698 747 aa21.18■□□□□ 0.98
TNFRSF1B-202ENST00000489921 CALML4Q96GE6 196 aa21.18■□□□□ 0.98
TNFRSF1B-202ENST00000489921 PLEKHA5Q9HAU0 1116 aa21.18■□□□□ 0.98
TNFRSF1B-202ENST00000489921 FBXL5Q9UKA1 691 aa21.18■□□□□ 0.98
TNFRSF1B-202ENST00000489921 TBX20Q9UMR3 447 aa21.18■□□□□ 0.98
TNFRSF1B-202ENST00000489921 ANK1P16157 1881 aa21.18■□□□□ 0.98
TNFRSF1B-202ENST00000489921 CLTAP09496 248 aa21.17■□□□□ 0.98
TNFRSF1B-202ENST00000489921 ATF2P15336 505 aa21.17■□□□□ 0.98
TNFRSF1B-202ENST00000489921 NBL1P41271 181 aa21.17■□□□□ 0.98
TNFRSF1B-202ENST00000489921 GPC5P78333 572 aa21.17■□□□□ 0.98
TNFRSF1B-202ENST00000489921 SLC5A9Q2M3M2 681 aa21.17■□□□□ 0.98
TNFRSF1B-202ENST00000489921 PABPC1LQ4VXU2 614 aaKnown RBP21.17■□□□□ 0.98
TNFRSF1B-202ENST00000489921 NPAS3Q8IXF0 933 aa21.17■□□□□ 0.98
TNFRSF1B-202ENST00000489921 DDX12PQ92771 950 aa21.17■□□□□ 0.98
TNFRSF1B-202ENST00000489921 RTP3Q9BQQ7 232 aa21.17■□□□□ 0.98
TNFRSF1B-202ENST00000489921 KCNH3Q9ULD8 1083 aa21.17■□□□□ 0.98
TNFRSF1B-202ENST00000489921 CLIC4Q9Y696 253 aa21.17■□□□□ 0.98
TNFRSF1B-202ENST00000489921 LACTBL1A8MY62 500 aa21.16■□□□□ 0.98
TNFRSF1B-202ENST00000489921 H0YCG3 227 aa21.16■□□□□ 0.98
TNFRSF1B-202ENST00000489921 NRG2O14511 850 aaPredicted RBP21.16■□□□□ 0.98
TNFRSF1B-202ENST00000489921 BMP15O95972 392 aa21.16■□□□□ 0.98
TNFRSF1B-202ENST00000489921 LRPAP1P30533 357 aa21.16■□□□□ 0.98
TNFRSF1B-202ENST00000489921 ENOX2Q16206 610 aaKnown RBP21.16■□□□□ 0.98
TNFRSF1B-202ENST00000489921 TCEAL8Q8IYN2 117 aa21.16■□□□□ 0.98
TNFRSF1B-202ENST00000489921 MYCT1Q8N699 235 aa21.16■□□□□ 0.98
TNFRSF1B-202ENST00000489921 DTWD2Q8NBA8 298 aa21.16■□□□□ 0.98
TNFRSF1B-202ENST00000489921 EPSTI1Q96J88 318 aa21.16■□□□□ 0.98
TNFRSF1B-202ENST00000489921 CCSER1Q9C0I3 900 aa21.16■□□□□ 0.98
TNFRSF1B-202ENST00000489921 TBC1D17Q9HA65 648 aa21.16■□□□□ 0.98
TNFRSF1B-202ENST00000489921 PARVGQ9HBI0 331 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms